Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP03_F_A19
(1042 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 41 3e-04
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 36 0.012
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 31 0.014
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 35 0.022
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 34 0.029
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 33 0.066
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 33 0.088
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 33 0.088
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 32 0.15
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 31 0.20
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 31 0.35
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 28 1.9
SPBC902.04 |||RNA-binding protein|Schizosaccharomyces pombe|chr ... 27 3.3
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 27 5.8
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo... 27 5.8
SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein Cap1|S... 26 7.6
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha... 26 7.6
SPAC26A3.09c |rga2||GTPase activating protein Rga2|Schizosacchar... 26 7.6
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 26 7.6
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 41.1 bits (92), Expect = 3e-04
Identities = 18/37 (48%), Positives = 18/37 (48%)
Frame = +2
Query: 5 PXPXXXPPPPPXPXXPXPPPPPPXNXPPXTXRGPRPP 115
P P P PPP P PPPPPP P GP PP
Sbjct: 744 PAPAPIPVPPPAPIMGGPPPPPP--PPGVAGAGPPPP 778
Score = 40.3 bits (90), Expect = 4e-04
Identities = 20/51 (39%), Positives = 20/51 (39%)
Frame = +2
Query: 23 PPPPPXPXXPXPPPPPPXNXPPXTXRGPRPPXLXXRGXASAAGXDPPXLXP 175
PPPPP P P P P PP G PP G A A PP P
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 38.3 bits (85), Expect = 0.002
Identities = 17/43 (39%), Positives = 17/43 (39%)
Frame = +2
Query: 5 PXPXXXPPPPPXPXXPXPPPPPPXNXPPXTXRGPRPPXLXXRG 133
P P PPP P P PPPPPP P PP G
Sbjct: 746 PAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAG 788
Score = 32.3 bits (70), Expect = 0.12
Identities = 15/36 (41%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
Frame = +2
Query: 5 PXPXXXPPPPPXPXXPXP-PPPPPXNXPPXTXRGPR 109
P PPPPP P PPPPP P + G R
Sbjct: 756 PIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGGSR 791
Score = 30.7 bits (66), Expect = 0.35
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +3
Query: 636 PPXPPPXASPXXAXPXXPXPPXPA 707
PP PPP A P P PP PA
Sbjct: 761 PPPPPPPPGVAGAGPPPPPPPPPA 784
Score = 27.9 bits (59), Expect = 2.5
Identities = 14/36 (38%), Positives = 14/36 (38%), Gaps = 4/36 (11%)
Frame = +1
Query: 19 PPXPPP----PPPXXXPPXTPPXEXPTXXPXGPPXP 114
PP PPP P P P PP P PP P
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPP 767
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 35.5 bits (78), Expect = 0.012
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = +1
Query: 10 PXXPPXPPPPPPXXXPPXTPPXEXP 84
P P PPPPPP PP PP P
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPP 29
Score = 33.9 bits (74), Expect = 0.038
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = +2
Query: 41 PXXPXPPPPPPXNXPPXTXRGPRPP 115
P P PPPPPP PP P PP
Sbjct: 6 PGNPPPPPPPPGFEPPSQPPPPPPP 30
Score = 31.9 bits (69), Expect = 0.15
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = +2
Query: 5 PXPXXXPPPPPXPXXPXPPPPPP 73
P PPPPP P PPPPP
Sbjct: 6 PGNPPPPPPPPGFEPPSQPPPPP 28
Score = 30.7 bits (66), Expect = 0.35
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = +1
Query: 19 PPXPPPPPPXXXPPXTPPXEXPTXXPXG 102
PP PPPPP P PP + P P G
Sbjct: 5 PPGNPPPPPP-PPGFEPPSQPPPPPPPG 31
Score = 30.7 bits (66), Expect = 0.35
Identities = 13/25 (52%), Positives = 13/25 (52%), Gaps = 2/25 (8%)
Frame = +2
Query: 5 PXPXXXPPPPPXPXXP--XPPPPPP 73
P PPPPP P PPPPPP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPP 29
Score = 29.1 bits (62), Expect = 1.1
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = +2
Query: 41 PXXPXPPPPPPXNXPPXTXRGPRPP 115
P PPPPPP P + P PP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPP 29
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 31.1 bits (67), Expect = 0.27
Identities = 17/56 (30%), Positives = 17/56 (30%), Gaps = 1/56 (1%)
Frame = +2
Query: 11 PXXXPPPPPXPXXPXPPPPPPXNXPPXTXRGPRP-PXLXXRGXASAAGXDPPXLXP 175
P P P PPPPPP P T P P S PP P
Sbjct: 224 PPTYTPKQADPLPAPPPPPPPTLPPQSTNTSQLPMPSRNVNNLGSQVNIPPPPATP 279
Score = 27.9 bits (59), Expect(2) = 0.014
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = +1
Query: 22 PXPPPPPPXXXPP 60
P PPPPPP PP
Sbjct: 236 PAPPPPPPPTLPP 248
Score = 26.2 bits (55), Expect(2) = 0.014
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +1
Query: 19 PPXPPPPPP 45
PP PPPPPP
Sbjct: 189 PPPPPPPPP 197
Score = 26.2 bits (55), Expect = 7.6
Identities = 16/53 (30%), Positives = 19/53 (35%), Gaps = 3/53 (5%)
Frame = +3
Query: 864 PPRPPXPPXXTXXXXXXXXXXA---LXPXXXXPPPPGXXARXXXPPXAAXTRA 1013
PP P PP T L PPPP ++ PP A TR+
Sbjct: 241 PPPPTLPPQSTNTSQLPMPSRNVNNLGSQVNIPPPPATPSQPPRPPTNASTRS 293
Score = 25.8 bits (54), Expect(2) = 0.67
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = +2
Query: 32 PPXPXXPXPPPPPPXN 79
PP P P PP PP N
Sbjct: 273 PPPPATPSQPPRPPTN 288
Score = 22.2 bits (45), Expect(2) = 0.67
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = +2
Query: 5 PXPXXXPPPPP 37
P P PPPPP
Sbjct: 234 PLPAPPPPPPP 244
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 34.7 bits (76), Expect = 0.022
Identities = 15/29 (51%), Positives = 15/29 (51%), Gaps = 2/29 (6%)
Frame = +1
Query: 28 PPPPPPXXXPPXTPPXEXPT--XXPXGPP 108
PPPPPP P PP PT P GPP
Sbjct: 1882 PPPPPPMALPKAGPPSAAPTSALPPAGPP 1910
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 34.3 bits (75), Expect = 0.029
Identities = 20/57 (35%), Positives = 20/57 (35%)
Frame = -2
Query: 174 GXKXGGSXPAADAXPRXXXXGGRGPRXVXGGXFXGGGGGGXGXXGXGGGGGXXXGXG 4
G GG P GG G G F GG GG G G GGG G G
Sbjct: 194 GGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGG 250
Score = 31.5 bits (68), Expect = 0.20
Identities = 19/39 (48%), Positives = 19/39 (48%), Gaps = 2/39 (5%)
Frame = -2
Query: 114 GGRGPRXVXGGXFXGGGGG-GXGXXGXGGG-GGXXXGXG 4
GG G G F GG GG G G G GGG GG G G
Sbjct: 221 GGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPG 259
Score = 27.5 bits (58), Expect = 3.3
Identities = 17/35 (48%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Frame = -2
Query: 105 GPRXVXGGXFXGGGG-GGXGXXGXGGGGGXXXGXG 4
GP GG GGG GG G G GG GG G G
Sbjct: 236 GPGGFGGGPGGFGGGLGGFG-GGPGGFGGGPGGHG 269
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 33.1 bits (72), Expect = 0.066
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = +2
Query: 5 PXPXXXPPPPPXPXXPXPPPPPPXNXPP 88
P P PP P P PP PPP PP
Sbjct: 1172 PAPSSGIPPVPKPAAGVPPVPPPSEAPP 1199
Score = 31.9 bits (69), Expect = 0.15
Identities = 15/36 (41%), Positives = 15/36 (41%), Gaps = 1/36 (2%)
Frame = +2
Query: 11 PXXXPPPPPXPXXPXPPPPPPXNXPP-XTXRGPRPP 115
P PP P P PP PPP PP T PP
Sbjct: 1193 PPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPP 1228
Score = 31.1 bits (67), Expect = 0.27
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +2
Query: 5 PXPXXXPPPPPXPXXPXPPPPPPXNXPP 88
P P PP P P PP P P PP
Sbjct: 1095 PKPSVAAPPVPKPSVAVPPVPAPSGAPP 1122
Score = 30.3 bits (65), Expect = 0.47
Identities = 16/50 (32%), Positives = 18/50 (36%)
Frame = +2
Query: 26 PPPPXPXXPXPPPPPPXNXPPXTXRGPRPPXLXXRGXASAAGXDPPXLXP 175
PP P P PP P P PP PP + + A PP P
Sbjct: 1022 PPVPLPSADAPPIPVPSTAPPVPIPTSTPP--VPKSSSGAPSAPPPVPAP 1069
Score = 30.3 bits (65), Expect = 0.47
Identities = 13/37 (35%), Positives = 13/37 (35%)
Frame = +2
Query: 5 PXPXXXPPPPPXPXXPXPPPPPPXNXPPXTXRGPRPP 115
P P PP P P P P P PP PP
Sbjct: 1182 PKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPP 1218
Score = 29.5 bits (63), Expect = 0.82
Identities = 13/37 (35%), Positives = 13/37 (35%)
Frame = +2
Query: 5 PXPXXXPPPPPXPXXPXPPPPPPXNXPPXTXRGPRPP 115
P P PP P P P P P PP PP
Sbjct: 1124 PKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPP 1160
Score = 29.5 bits (63), Expect = 0.82
Identities = 14/38 (36%), Positives = 14/38 (36%), Gaps = 1/38 (2%)
Frame = +2
Query: 5 PXPXXXPPPPPXPXXPXPP-PPPPXNXPPXTXRGPRPP 115
P P PP P P PP P P PP PP
Sbjct: 1162 PKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPP 1199
Score = 29.1 bits (62), Expect = 1.1
Identities = 13/37 (35%), Positives = 13/37 (35%)
Frame = +2
Query: 5 PXPXXXPPPPPXPXXPXPPPPPPXNXPPXTXRGPRPP 115
P P PP P P P P P PP PP
Sbjct: 1105 PKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPP 1141
Score = 28.3 bits (60), Expect = 1.9
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +2
Query: 23 PPPPPXPXXPXPPPPPPXNXPPXTXRGPRPP 115
PPP P P P P P PP PP
Sbjct: 1063 PPPVPAPSSEIPSIPAPSGAPPVPAPSGIPP 1093
Score = 28.3 bits (60), Expect = 1.9
Identities = 17/52 (32%), Positives = 20/52 (38%)
Frame = +2
Query: 5 PXPXXXPPPPPXPXXPXPPPPPPXNXPPXTXRGPRPPXLXXRGXASAAGXDP 160
P P PP P P PP P P PP P+P A ++G P
Sbjct: 1134 PVPSGA-PPVPKPSVAAPPVPAPSGAPPV----PKPSVAAPPVPAPSSGIPP 1180
Score = 27.9 bits (59), Expect = 2.5
Identities = 10/23 (43%), Positives = 11/23 (47%)
Frame = +3
Query: 636 PPXPPPXASPXXAXPXXPXPPXP 704
PP PPP +P P PP P
Sbjct: 1208 PPVPPPSTAPPVPTPSAGLPPVP 1230
Score = 27.5 bits (58), Expect = 3.3
Identities = 10/23 (43%), Positives = 11/23 (47%)
Frame = +3
Query: 636 PPXPPPXASPXXAXPXXPXPPXP 704
PP PPP +P P PP P
Sbjct: 1189 PPVPPPSEAPPVPKPSVGVPPVP 1211
Score = 27.5 bits (58), Expect = 3.3
Identities = 11/28 (39%), Positives = 12/28 (42%)
Frame = +2
Query: 5 PXPXXXPPPPPXPXXPXPPPPPPXNXPP 88
P P PP P P PP P P + P
Sbjct: 1220 PTPSAGLPPVPVPTAKAPPVPAPSSEAP 1247
Score = 26.6 bits (56), Expect = 5.8
Identities = 12/33 (36%), Positives = 13/33 (39%)
Frame = +1
Query: 10 PXXPPXPPPPPPXXXPPXTPPXEXPTXXPXGPP 108
P PP PPP P +P E P P P
Sbjct: 963 PAAPPSIPPPLPVSNILSSPTSEPPKDHPPSAP 995
Score = 26.6 bits (56), Expect = 5.8
Identities = 10/24 (41%), Positives = 11/24 (45%)
Frame = +3
Query: 636 PPXPPPXASPXXAXPXXPXPPXPA 707
PP P P +P P PP PA
Sbjct: 1150 PPVPAPSGAPPVPKPSVAAPPVPA 1173
Score = 26.2 bits (55), Expect = 7.6
Identities = 13/32 (40%), Positives = 13/32 (40%), Gaps = 3/32 (9%)
Frame = +1
Query: 19 PPXPPPP---PPXXXPPXTPPXEXPTXXPXGP 105
PP P P PP P PP PT P P
Sbjct: 1022 PPVPLPSADAPPIPVPSTAPPVPIPTSTPPVP 1053
Score = 26.2 bits (55), Expect = 7.6
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = +2
Query: 5 PXPXXXPPPPPXPXXPXPPPPPPXNXPP 88
P P PP P P PP P P + PP
Sbjct: 1025 PLPSADAPPIPVP-STAPPVPIPTSTPP 1051
Score = 26.2 bits (55), Expect = 7.6
Identities = 12/37 (32%), Positives = 12/37 (32%)
Frame = +2
Query: 5 PXPXXXPPPPPXPXXPXPPPPPPXNXPPXTXRGPRPP 115
P P PP P P P P PP PP
Sbjct: 1086 PAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPP 1122
Score = 26.2 bits (55), Expect = 7.6
Identities = 10/24 (41%), Positives = 11/24 (45%)
Frame = +3
Query: 636 PPXPPPXASPXXAXPXXPXPPXPA 707
PP P P +P P PP PA
Sbjct: 1131 PPVPVPSGAPPVPKPSVAAPPVPA 1154
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 32.7 bits (71), Expect = 0.088
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = +1
Query: 19 PPXPPPPPPXXXPPXTPPXEXPTXXPXGPPXP 114
P PPPP PP PP P P PP P
Sbjct: 1705 PTPPPPPMSVPPPPSAPP--MPAGPPSAPPPP 1734
Score = 32.3 bits (70), Expect = 0.12
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = +2
Query: 23 PPPPPXPXXPXPPPPPPXNXPPXTXRGPRP 112
PPPPP P P PP PP P P
Sbjct: 1707 PPPPPMSVPPPPSAPPMPAGPPSAPPPPLP 1736
Score = 31.5 bits (68), Expect = 0.20
Identities = 15/38 (39%), Positives = 15/38 (39%), Gaps = 2/38 (5%)
Frame = +2
Query: 5 PXPXXXPPPPPXPXXPXPPP--PPPXNXPPXTXRGPRP 112
P P PPPP P P PP PPP P P
Sbjct: 1709 PPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVPNP 1746
Score = 30.3 bits (65), Expect = 0.47
Identities = 14/39 (35%), Positives = 15/39 (38%)
Frame = +2
Query: 5 PXPXXXPPPPPXPXXPXPPPPPPXNXPPXTXRGPRPPXL 121
P P PP P P PPP P + P G R L
Sbjct: 1715 PPPPSAPPMPAGPPSAPPPPLPASSAPSVPNPGDRSALL 1753
Score = 27.9 bits (59), Expect = 2.5
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +1
Query: 4 TXPXXPPXPPPPPPXXXPPXTPPXEXPTXXP 96
T P P PPPP P PP P P
Sbjct: 1706 TPPPPPMSVPPPPSAPPMPAGPPSAPPPPLP 1736
Score = 27.5 bits (58), Expect = 3.3
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = +2
Query: 32 PPXPXXPXPPPPPPXNXPPXTXRGPRP 112
PP P PPPPP + PP P P
Sbjct: 1699 PPQMSAPTPPPPPM-SVPPPPSAPPMP 1724
Score = 26.6 bits (56), Expect = 5.8
Identities = 13/37 (35%), Positives = 13/37 (35%)
Frame = +1
Query: 4 TXPXXPPXPPPPPPXXXPPXTPPXEXPTXXPXGPPXP 114
T P P PP P PP P P PP P
Sbjct: 1689 TPPVRPQSAAPPQMSAPTPPPPPMSVP-PPPSAPPMP 1724
Score = 26.2 bits (55), Expect = 7.6
Identities = 12/22 (54%), Positives = 12/22 (54%), Gaps = 1/22 (4%)
Frame = +3
Query: 645 PPPXASPXXA-XPXXPXPPXPA 707
PPP A P A P P PP PA
Sbjct: 1716 PPPSAPPMPAGPPSAPPPPLPA 1737
Score = 24.6 bits (51), Expect(2) = 0.51
Identities = 9/19 (47%), Positives = 10/19 (52%)
Frame = +1
Query: 502 GPXXRPPPPXPXPAAXPXP 558
GP PPPP P +A P
Sbjct: 1726 GPPSAPPPPLPASSAPSVP 1744
Score = 23.8 bits (49), Expect(2) = 0.51
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = +1
Query: 370 PXPXPPPXXPXPPP 411
P P PPP PPP
Sbjct: 1705 PTPPPPPMSVPPPP 1718
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 32.7 bits (71), Expect = 0.088
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = +1
Query: 19 PPXPPPPPPXXXPPXTPPXEXPTXXPXGPPXP 114
PP PP P PP PP P P PP P
Sbjct: 420 PPSLPPSAPPSLPPSAPP-SLPMGAPAAPPLP 450
Score = 31.9 bits (69), Expect = 0.15
Identities = 21/58 (36%), Positives = 23/58 (39%), Gaps = 12/58 (20%)
Frame = +2
Query: 23 PPPPPXPXX------PXPP------PPPPXNXPPXTXRGPRPPXLXXRGXASAAGXDP 160
PPPPP P P PP PPPP P T R P PP R ++ P
Sbjct: 337 PPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQP-PPLSSSRAVSNPPAPPP 393
Score = 28.3 bits (60), Expect = 1.9
Identities = 10/23 (43%), Positives = 11/23 (47%)
Frame = +1
Query: 40 PPXXXPPXTPPXEXPTXXPXGPP 108
PP PP PP P+ P PP
Sbjct: 415 PPVPTPPSLPPSAPPSLPPSAPP 437
Score = 28.3 bits (60), Expect = 1.9
Identities = 14/37 (37%), Positives = 14/37 (37%), Gaps = 1/37 (2%)
Frame = +2
Query: 5 PXPXXXPPPPPXP-XXPXPPPPPPXNXPPXTXRGPRP 112
P P P PP P P PP PP P P P
Sbjct: 448 PLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPAP 484
Score = 27.9 bits (59), Expect = 2.5
Identities = 12/35 (34%), Positives = 12/35 (34%)
Frame = +1
Query: 4 TXPXXPPXPPPPPPXXXPPXTPPXEXPTXXPXGPP 108
T PP PP P P P P P PP
Sbjct: 225 TSTSAPPIPPSIPSSRPPERVPSLSAPAPPPIPPP 259
Score = 27.9 bits (59), Expect = 2.5
Identities = 11/26 (42%), Positives = 12/26 (46%)
Frame = +1
Query: 28 PPPPPPXXXPPXTPPXEXPTXXPXGP 105
PP P P PP PP P+ P P
Sbjct: 415 PPVPTPPSLPPSAPPSLPPSAPPSLP 440
Score = 27.5 bits (58), Expect = 3.3
Identities = 12/31 (38%), Positives = 13/31 (41%)
Frame = +2
Query: 23 PPPPPXPXXPXPPPPPPXNXPPXTXRGPRPP 115
PPPPP P PP N + P PP
Sbjct: 311 PPPPPPPSRRNRGKPPIGNGSSNSSLPPPPP 341
Score = 26.6 bits (56), Expect = 5.8
Identities = 12/37 (32%), Positives = 12/37 (32%)
Frame = +2
Query: 5 PXPXXXPPPPPXPXXPXPPPPPPXNXPPXTXRGPRPP 115
P P PP P P PP P P P P
Sbjct: 418 PTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAP 454
Score = 26.2 bits (55), Expect = 7.6
Identities = 13/38 (34%), Positives = 14/38 (36%), Gaps = 1/38 (2%)
Frame = +2
Query: 5 PXPXXXPPPPPXPXXPXP-PPPPPXNXPPXTXRGPRPP 115
P PPPPP P PPP + P PP
Sbjct: 355 PQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPP 392
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 31.9 bits (69), Expect = 0.15
Identities = 16/47 (34%), Positives = 19/47 (40%), Gaps = 1/47 (2%)
Frame = +2
Query: 26 PPPPXPXXPXPPPPPPXNXPPXTXRGPR-PPXLXXRGXASAAGXDPP 163
PP P P PPP P + PP + P P L +A PP
Sbjct: 139 PPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPP 185
Score = 27.5 bits (58), Expect = 3.3
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +2
Query: 50 PXPPPPPPXNXPPXTXRGPRPPXL 121
P PPPPPP P P PP +
Sbjct: 3 PAPPPPPP--APAPAAAAPAPPLM 24
Score = 27.5 bits (58), Expect = 3.3
Identities = 18/60 (30%), Positives = 19/60 (31%), Gaps = 3/60 (5%)
Frame = +2
Query: 5 PXPXXXPPPPPXPXXPXP---PPPPPXNXPPXTXRGPRPPXLXXRGXASAAGXDPPXLXP 175
P PPP P P P PP P PP P SA PP + P
Sbjct: 144 PPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPP 203
Score = 26.6 bits (56), Expect = 5.8
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = +1
Query: 22 PXPPPPPPXXXPPXTPP 72
P PPPPPP P P
Sbjct: 3 PAPPPPPPAPAPAAAAP 19
Score = 26.2 bits (55), Expect = 7.6
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = +2
Query: 23 PPPPPXPXXPXPPPPPP 73
PPPPP P P PP
Sbjct: 6 PPPPPAPAPAAAAPAPP 22
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 31.5 bits (68), Expect = 0.20
Identities = 16/37 (43%), Positives = 16/37 (43%)
Frame = -2
Query: 114 GGRGPRXVXGGXFXGGGGGGXGXXGXGGGGGXXXGXG 4
GGRG G F GG GG G G GGG G
Sbjct: 9 GGRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARG 45
Score = 30.3 bits (65), Expect = 0.47
Identities = 16/35 (45%), Positives = 16/35 (45%)
Frame = -3
Query: 113 GXGGPXGXXVGXSXGGVXGGXXXGGGGGGXGGXXG 9
G GG G G GG GG GG GG GG G
Sbjct: 27 GFGGGRGGARGGGRGGARGG--RGGRGGARGGRGG 59
Score = 29.9 bits (64), Expect = 0.62
Identities = 18/42 (42%), Positives = 18/42 (42%)
Frame = -2
Query: 129 RXXXXGGRGPRXVXGGXFXGGGGGGXGXXGXGGGGGXXXGXG 4
R G RG R G G GGG G G GG GG G G
Sbjct: 8 RGGRGGSRGGRGGFNGGRGGFGGGRGGARG-GGRGGARGGRG 48
Score = 29.9 bits (64), Expect = 0.62
Identities = 18/42 (42%), Positives = 18/42 (42%)
Frame = -2
Query: 129 RXXXXGGRGPRXVXGGXFXGGGGGGXGXXGXGGGGGXXXGXG 4
R GGRG G F GGG GG G GG G G G
Sbjct: 11 RGGSRGGRGGFNGGRGGF-GGGRGGARGGGRGGARGGRGGRG 51
Score = 29.9 bits (64), Expect = 0.62
Identities = 18/42 (42%), Positives = 18/42 (42%)
Frame = -2
Query: 129 RXXXXGGRGPRXVXGGXFXGGGGGGXGXXGXGGGGGXXXGXG 4
R GGRG G GGG GG G GG GG G G
Sbjct: 18 RGGFNGGRGGFGGGRGGARGGGRGG-ARGGRGGRGGARGGRG 58
Score = 28.7 bits (61), Expect = 1.4
Identities = 18/45 (40%), Positives = 18/45 (40%)
Frame = -2
Query: 162 GGSXPAADAXPRXXXXGGRGPRXVXGGXFXGGGGGGXGXXGXGGG 28
GG A R GGRG R GG G GG G G GG
Sbjct: 29 GGGRGGARGGGRGGARGGRGGR---GGARGGRGGSSGGRGGAKGG 70
Score = 27.1 bits (57), Expect = 4.4
Identities = 17/42 (40%), Positives = 17/42 (40%)
Frame = -2
Query: 129 RXXXXGGRGPRXVXGGXFXGGGGGGXGXXGXGGGGGXXXGXG 4
R GGRG G GG GG G GG GG G G
Sbjct: 25 RGGFGGGRGGARGGGRGGARGGRGGRG-GARGGRGGSSGGRG 65
Score = 26.6 bits (56), Expect = 5.8
Identities = 16/35 (45%), Positives = 16/35 (45%)
Frame = -3
Query: 113 GXGGPXGXXVGXSXGGVXGGXXXGGGGGGXGGXXG 9
G GG G G GG GG GG GG GG G
Sbjct: 39 GRGGARGGRGGR--GGARGGR--GGSSGGRGGAKG 69
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 30.7 bits (66), Expect = 0.35
Identities = 19/42 (45%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Frame = -2
Query: 129 RXXXXGGRG-PRXVXGGXFXGG-GGGGXGXXGXGGGGGXXXG 10
R GGRG R GG GG GGG G G G GG G
Sbjct: 140 RGGFRGGRGGSRGGFGGNSRGGFGGGSRGGFGGGSRGGSRGG 181
Score = 27.1 bits (57), Expect = 4.4
Identities = 17/37 (45%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Frame = -2
Query: 111 GRGPRXVXGGXFXGGGGGGXGXXGXGG-GGGXXXGXG 4
GRG R G GG GG G GG GGG G G
Sbjct: 136 GRGGRGGFRGG-RGGSRGGFGGNSRGGFGGGSRGGFG 171
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 28.3 bits (60), Expect = 1.9
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +1
Query: 10 PXXPPXPPPPPP 45
P PP PPPPPP
Sbjct: 942 PAFPPPPPPPPP 953
>SPBC902.04 |||RNA-binding protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 589
Score = 27.5 bits (58), Expect = 3.3
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = +2
Query: 23 PPPPPXPXXPXPPPPPPXNXPPXTXRGPR 109
P PP P P P P PP RG R
Sbjct: 166 PAMPPIPFLPFNPAAQPPFPPPFKMRGKR 194
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 26.6 bits (56), Expect = 5.8
Identities = 13/35 (37%), Positives = 14/35 (40%), Gaps = 1/35 (2%)
Frame = +2
Query: 11 PXXXPPPPPXPXXPXP-PPPPPXNXPPXTXRGPRP 112
P PPPP P PPPP + P P P
Sbjct: 203 PGEHMPPPPMHHKPGEHMPPPPMHHEPGEHMPPPP 237
Score = 26.6 bits (56), Expect = 5.8
Identities = 13/35 (37%), Positives = 14/35 (40%), Gaps = 1/35 (2%)
Frame = +2
Query: 11 PXXXPPPPPXPXXPXP-PPPPPXNXPPXTXRGPRP 112
P PPPP P PPPP + P P P
Sbjct: 216 PGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 250
Score = 26.6 bits (56), Expect = 5.8
Identities = 13/35 (37%), Positives = 14/35 (40%), Gaps = 1/35 (2%)
Frame = +2
Query: 11 PXXXPPPPPXPXXPXP-PPPPPXNXPPXTXRGPRP 112
P PPPP P PPPP + P P P
Sbjct: 229 PGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 263
Score = 26.6 bits (56), Expect = 5.8
Identities = 13/35 (37%), Positives = 14/35 (40%), Gaps = 1/35 (2%)
Frame = +2
Query: 11 PXXXPPPPPXPXXPXP-PPPPPXNXPPXTXRGPRP 112
P PPPP P PPPP + P P P
Sbjct: 242 PGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 276
Score = 26.6 bits (56), Expect = 5.8
Identities = 13/35 (37%), Positives = 14/35 (40%), Gaps = 1/35 (2%)
Frame = +2
Query: 11 PXXXPPPPPXPXXPXPP-PPPPXNXPPXTXRGPRP 112
P PPPP P PPPP + P P P
Sbjct: 255 PGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 289
Score = 26.6 bits (56), Expect = 5.8
Identities = 13/35 (37%), Positives = 14/35 (40%), Gaps = 1/35 (2%)
Frame = +2
Query: 11 PXXXPPPPPXPXXPXPP-PPPPXNXPPXTXRGPRP 112
P PPPP P PPPP + P P P
Sbjct: 268 PGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 302
Score = 26.6 bits (56), Expect = 5.8
Identities = 13/35 (37%), Positives = 14/35 (40%), Gaps = 1/35 (2%)
Frame = +2
Query: 11 PXXXPPPPPXPXXPXP-PPPPPXNXPPXTXRGPRP 112
P PPPP P PPPP + P P P
Sbjct: 281 PGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 315
Score = 26.6 bits (56), Expect = 5.8
Identities = 13/35 (37%), Positives = 14/35 (40%), Gaps = 1/35 (2%)
Frame = +2
Query: 11 PXXXPPPPPXPXXPXPP-PPPPXNXPPXTXRGPRP 112
P PPPP P PPPP + P P P
Sbjct: 294 PGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 328
Score = 26.6 bits (56), Expect = 5.8
Identities = 13/35 (37%), Positives = 14/35 (40%), Gaps = 1/35 (2%)
Frame = +2
Query: 11 PXXXPPPPPXPXXPXP-PPPPPXNXPPXTXRGPRP 112
P PPPP P PPPP + P P P
Sbjct: 307 PGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 341
>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1224
Score = 26.6 bits (56), Expect = 5.8
Identities = 16/51 (31%), Positives = 18/51 (35%), Gaps = 1/51 (1%)
Frame = +2
Query: 26 PPPPXPXXPXPPPPPPXNXPPXTXRGPRPPXLXXRGXAS-AAGXDPPXLXP 175
PP P PPP P + RPP G +S AA P P
Sbjct: 1062 PPVSATRPQIPQPPPVSTALPSSSAVSRPPIATSAGRSSTAASTSAPLTYP 1112
>SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein
Cap1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 551
Score = 26.2 bits (55), Expect = 7.6
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +1
Query: 19 PPXPPPPPP 45
PP PPPPPP
Sbjct: 306 PPPPPPPPP 314
>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 884
Score = 26.2 bits (55), Expect = 7.6
Identities = 11/30 (36%), Positives = 11/30 (36%)
Frame = +2
Query: 23 PPPPPXPXXPXPPPPPPXNXPPXTXRGPRP 112
P P P P PPPPP P P
Sbjct: 732 PTPAPTPAVKHHPPPPPVRSSISPSMPPAP 761
>SPAC26A3.09c |rga2||GTPase activating protein
Rga2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1275
Score = 26.2 bits (55), Expect = 7.6
Identities = 15/42 (35%), Positives = 16/42 (38%), Gaps = 1/42 (2%)
Frame = +2
Query: 11 PXXXPPPPPXPXXPXP-PPPPPXNXPPXTXRGPRPPXLXXRG 133
P P P P PPPPP + T R P L RG
Sbjct: 402 PTSNVPAYSTPARPTESPPPPPISSSSTTPRPDDKPSLPPRG 443
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 26.2 bits (55), Expect = 7.6
Identities = 12/37 (32%), Positives = 13/37 (35%)
Frame = +2
Query: 5 PXPXXXPPPPPXPXXPXPPPPPPXNXPPXTXRGPRPP 115
P P P P P P PP P P + P P
Sbjct: 575 PQPPVAPVAPEVPSVPQPPVAPVVPEAPSVPQPPVAP 611
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.309 0.147 0.529
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,440,126
Number of Sequences: 5004
Number of extensions: 24609
Number of successful extensions: 613
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 57
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 386
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 545231778
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 43 (21.9 bits)
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