Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_A18
         (870 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_02_0055 + 6403183-6403357,6404090-6404673                           31   1.2  
10_08_0223 - 15986763-15987575                                         29   6.4  
03_02_0916 + 12364557-12364906,12365485-12365592,12365731-12366343     29   6.4  
10_08_0940 - 21708557-21708733,21709058-21709142,21709330-217095...    28   8.5  

>02_02_0055 + 6403183-6403357,6404090-6404673
          Length = 252

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
 Frame = +2

Query: 554 QKSTLKSEVAKPDRT-IKIPGVSPWKLPSCALPGSDPAR 667
           Q+ T       PD T I +  V PW+LP+ A+ GSD  R
Sbjct: 31  QRRTAAQPCVTPDITDIDVYNVDPWQLPAMAMYGSDHDR 69


>10_08_0223 - 15986763-15987575
          Length = 270

 Score = 28.7 bits (61), Expect = 6.4
 Identities = 26/77 (33%), Positives = 32/77 (41%), Gaps = 6/77 (7%)
 Frame = -1

Query: 687 GGQVSGKRAGSEPGR-AXEGSFQGET-PGIFIVLSGFATSDLSVDFCDARQGGGA----Y 526
           GG   G   GS  G  A  G   GE+   I +  S  +  D +  + DA  GGG     +
Sbjct: 142 GGGGGGSNGGSGYGAGAGVGQGAGESGSSIAMAPSPSSGGDYNGGYADAAGGGGGGGGGH 201

Query: 525 GKTPATRPFYGSWPFAG 475
           G  PA  P YG    AG
Sbjct: 202 GGGPAASPSYGVGAGAG 218


>03_02_0916 + 12364557-12364906,12365485-12365592,12365731-12366343
          Length = 356

 Score = 28.7 bits (61), Expect = 6.4
 Identities = 22/56 (39%), Positives = 25/56 (44%), Gaps = 4/56 (7%)
 Frame = +1

Query: 343 PLPRSLTRCARSF--GCGERYQLTQRR*YGYPQNQGITQ--ERTCEQKASKRPGTV 498
           P PRS  RC      GCG R Q TQR     P N  IT   E TC   ++  P  +
Sbjct: 150 PYPRSYYRCTHKLDQGCGARRQ-TQRC-EADPSNYDITYYGEHTCRDPSTIIPTAI 203


>10_08_0940 -
           21708557-21708733,21709058-21709142,21709330-21709551,
           21710640-21710815,21711883-21711946,21712433-21712507,
           21715114-21715199,21715297-21716715
          Length = 767

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
 Frame = +1

Query: 292 NESAN---ARGEAVCVLGALPLPRSLTRCAR 375
           +ESAN   AR EAV  +G +P+   L RC+R
Sbjct: 434 DESANVDAARSEAVMRVGGIPMLLDLARCSR 464


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,901,307
Number of Sequences: 37544
Number of extensions: 488971
Number of successful extensions: 1348
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1307
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1348
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2444475072
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)