Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_A18
         (870 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z48615-1|CAA88531.1|  953|Homo sapiens serine/threonine kinase w...    31   4.1  
X90846-1|CAA62351.1|  954|Homo sapiens mixed lineage kinase 2 pr...    31   4.1  
BC142728-1|AAI42729.1|  417|Homo sapiens SAMD14 protein protein.       31   7.2  
BC141822-1|AAI41823.1|  417|Homo sapiens SAMD14 protein protein.       31   7.2  
BC047081-1|AAH47081.1|  427|Homo sapiens SAMD14 protein protein.       31   7.2  
BC029872-1|AAH29872.1|  247|Homo sapiens SAMD14 protein protein.       31   7.2  

>Z48615-1|CAA88531.1|  953|Homo sapiens serine/threonine kinase with
           SH3 domain, leucine zipper domain and proline rich
           protein.
          Length = 953

 Score = 31.5 bits (68), Expect = 4.1
 Identities = 22/85 (25%), Positives = 40/85 (47%), Gaps = 2/85 (2%)
 Frame = -1

Query: 732 GVSYEKGATLSXREKGGQ--VSGKRAGSEPGRAXEGSFQGETPGIFIVLSGFATSDLSVD 559
           G ++   +TL     GG+  + G   GS+   +   +  G++P    +  GFA+ +   +
Sbjct: 555 GRTWGPSSTLQKERVGGEERLKGLGEGSKQWSSSAPNL-GKSPKHTPIAPGFASLNEMEE 613

Query: 558 FCDARQGGGAYGKTPATRPFYGSWP 484
           F +A  GG +   +P + P Y S P
Sbjct: 614 FAEAEDGGSSVPPSPYSTPSYLSVP 638


>X90846-1|CAA62351.1|  954|Homo sapiens mixed lineage kinase 2
           protein.
          Length = 954

 Score = 31.5 bits (68), Expect = 4.1
 Identities = 22/85 (25%), Positives = 40/85 (47%), Gaps = 2/85 (2%)
 Frame = -1

Query: 732 GVSYEKGATLSXREKGGQ--VSGKRAGSEPGRAXEGSFQGETPGIFIVLSGFATSDLSVD 559
           G ++   +TL     GG+  + G   GS+   +   +  G++P    +  GFA+ +   +
Sbjct: 556 GRTWGPSSTLQKERVGGEERLKGLGEGSKQWSSSAPNL-GKSPKHTPIAPGFASLNEMEE 614

Query: 558 FCDARQGGGAYGKTPATRPFYGSWP 484
           F +A  GG +   +P + P Y S P
Sbjct: 615 FAEAEDGGSSVPPSPYSTPSYLSVP 639


>BC142728-1|AAI42729.1|  417|Homo sapiens SAMD14 protein protein.
          Length = 417

 Score = 30.7 bits (66), Expect = 7.2
 Identities = 14/34 (41%), Positives = 19/34 (55%)
 Frame = +2

Query: 548 ASQKSTLKSEVAKPDRTIKIPGVSPWKLPSCALP 649
           ASQ+STL  +   P  + KIP   PW+   C+ P
Sbjct: 272 ASQESTLSDDSTPPSSSPKIPS-GPWQEAKCSYP 304


>BC141822-1|AAI41823.1|  417|Homo sapiens SAMD14 protein protein.
          Length = 417

 Score = 30.7 bits (66), Expect = 7.2
 Identities = 14/34 (41%), Positives = 19/34 (55%)
 Frame = +2

Query: 548 ASQKSTLKSEVAKPDRTIKIPGVSPWKLPSCALP 649
           ASQ+STL  +   P  + KIP   PW+   C+ P
Sbjct: 272 ASQESTLSDDSTPPSSSPKIPS-GPWQEAKCSYP 304


>BC047081-1|AAH47081.1|  427|Homo sapiens SAMD14 protein protein.
          Length = 427

 Score = 30.7 bits (66), Expect = 7.2
 Identities = 14/34 (41%), Positives = 19/34 (55%)
 Frame = +2

Query: 548 ASQKSTLKSEVAKPDRTIKIPGVSPWKLPSCALP 649
           ASQ+STL  +   P  + KIP   PW+   C+ P
Sbjct: 282 ASQESTLSDDSTPPSSSPKIPS-GPWQEAKCSYP 314


>BC029872-1|AAH29872.1|  247|Homo sapiens SAMD14 protein protein.
          Length = 247

 Score = 30.7 bits (66), Expect = 7.2
 Identities = 14/34 (41%), Positives = 19/34 (55%)
 Frame = +2

Query: 548 ASQKSTLKSEVAKPDRTIKIPGVSPWKLPSCALP 649
           ASQ+STL  +   P  + KIP   PW+   C+ P
Sbjct: 102 ASQESTLSDDSTPPSSSPKIPS-GPWQEAKCSYP 134


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,779,530
Number of Sequences: 237096
Number of extensions: 2737123
Number of successful extensions: 15321
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 15041
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15317
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11048563978
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)