Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_A18
         (870 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U28409-4|AAC46590.2|  394|Caenorhabditis elegans Saposin-like pr...    32   0.46 

>U28409-4|AAC46590.2|  394|Caenorhabditis elegans Saposin-like
           protein family protein11 protein.
          Length = 394

 Score = 32.3 bits (70), Expect = 0.46
 Identities = 15/31 (48%), Positives = 19/31 (61%)
 Frame = +2

Query: 596 TIKIPGVSPWKLPSCALPGSDPARLPDTCPP 688
           TIKIP + P KLP+  +P + P  LP T  P
Sbjct: 214 TIKIPEIVPTKLPTVEVPDTIPKTLPTTKIP 244



 Score = 28.7 bits (61), Expect = 5.7
 Identities = 12/38 (31%), Positives = 22/38 (57%)
 Frame = +2

Query: 596 TIKIPGVSPWKLPSCALPGSDPARLPDTCPPFSLXESV 709
           T+KIP + P  LP+  +P   P +LP    P ++ +++
Sbjct: 201 TVKIPDIIPITLPTIKIPEIVPTKLPTVEVPDTIPKTL 238


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,329,519
Number of Sequences: 27780
Number of extensions: 376918
Number of successful extensions: 873
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 827
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 873
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2181923744
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)