Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP03_F_A17
(954 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 37 0.004
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 36 0.006
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 35 0.015
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 35 0.019
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 34 0.034
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 29 0.099
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 32 0.14
SPBC8D2.18c |||adenosylhomocysteinase |Schizosaccharomyces pombe... 30 0.55
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 29 1.3
SPAC26A3.16 |dph1|ucp5|UBA domain protein Dph1|Schizosaccharomyc... 28 1.7
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 26 2.8
SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr 2... 23 2.9
SPAC17C9.07 |alg8||glucosyltransferase Alg8|Schizosaccharomyces ... 27 2.9
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 27 2.9
SPBC119.05c |||Wiskott-Aldrich syndrome homolog binding protein ... 27 5.1
SPBC543.02c |||DNAJ/TPR domain protein DNAJC7 family|Schizosacch... 27 5.1
SPBC1347.05c |||DNAJ domain protein Scj1|Schizosaccharomyces pom... 26 6.8
SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein Cap1|S... 26 6.8
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 26 9.0
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 26 9.0
SPCC830.07c |psi1|psi|DNAJ domain protein Psi1|Schizosaccharomyc... 26 9.0
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 37.1 bits (82), Expect = 0.004
Identities = 17/33 (51%), Positives = 17/33 (51%)
Frame = -3
Query: 880 GGGXXXGGGXGXXXGGGGGGXGGGXXGGGGXXG 782
GG GGG G GGG GG GG G GG G
Sbjct: 23 GGRGGFGGGRGGARGGGRGGARGGRGGRGGARG 55
Score = 33.1 bits (72), Expect = 0.059
Identities = 19/53 (35%), Positives = 20/53 (37%)
Frame = -2
Query: 689 GXXXXXGKXGGXXGGWXGGGGAXXGGXPXXGXGGRGVXGXEPXGVGAV*GXGG 531
G G G GG+ GG G GG GGRG G G G G G
Sbjct: 13 GSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRG 65
Score = 33.1 bits (72), Expect = 0.059
Identities = 15/33 (45%), Positives = 15/33 (45%)
Frame = -3
Query: 880 GGGXXXGGGXGXXXGGGGGGXGGGXXGGGGXXG 782
GG GG G GG GG GGG G G G
Sbjct: 16 GGRGGFNGGRGGFGGGRGGARGGGRGGARGGRG 48
Score = 31.9 bits (69), Expect = 0.14
Identities = 17/38 (44%), Positives = 17/38 (44%)
Frame = -3
Query: 895 GXXXXGGGXXXGGGXGXXXGGGGGGXGGGXXGGGGXXG 782
G G G GGG G GG GG GG G GG G
Sbjct: 26 GGFGGGRGGARGGGRGGAR-GGRGGRGGARGGRGGSSG 62
Score = 31.5 bits (68), Expect = 0.18
Identities = 16/34 (47%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Frame = -3
Query: 880 GGGXXXGGGXGXXXGGGGGGXGGGXXGG-GGXXG 782
GG GG GG GGG GG GG GG G
Sbjct: 12 GGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARG 45
Score = 31.1 bits (67), Expect = 0.24
Identities = 24/67 (35%), Positives = 26/67 (38%), Gaps = 1/67 (1%)
Frame = -2
Query: 689 GXXXXXGKXGGXXGGWXGGGGAXXGGXPXXGXGGR-GVXGXEPXGVGAV*GXGGXXXIEG 513
G G G GG+ GG G GG GGR G G GA G GG G
Sbjct: 6 GSRGGRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRG 65
Query: 512 XXSXGGA 492
+ GGA
Sbjct: 66 -GAKGGA 71
Score = 28.7 bits (61), Expect = 1.3
Identities = 17/35 (48%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
Frame = -3
Query: 880 GGGXXXGGGXGXXXGGGGGGXGGGXXG--GGGXXG 782
GG GG G GG GG GGG G GGG G
Sbjct: 9 GGRGGSRGGRGGF-NGGRGGFGGGRGGARGGGRGG 42
Score = 28.3 bits (60), Expect = 1.7
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = -3
Query: 880 GGGXXXGGGXGXXXGGGGGGXGGGXXGGGG 791
GG GG G GG GG GG GG
Sbjct: 41 GGARGGRGGRGGARGGRGGSSGGRGGAKGG 70
Score = 26.6 bits (56), Expect = 5.1
Identities = 22/63 (34%), Positives = 23/63 (36%)
Frame = -1
Query: 570 GTXXGRGSVGXXGXXXHRGXGIMXGGXXXPQ*RGDPRPXXXGGGXGXXGGXGGGXSXYTK 391
G GRG G G RG G G RG R GG G GG GG +
Sbjct: 20 GFNGGRGGFGG-GRGGARGGG-RGGARGGRGGRGGAR-GGRGGSSGGRGGAKGGAKVIIE 76
Query: 390 XHR 382
HR
Sbjct: 77 PHR 79
Score = 25.8 bits (54), Expect = 9.0
Identities = 18/53 (33%), Positives = 20/53 (37%)
Frame = -1
Query: 570 GTXXGRGSVGXXGXXXHRGXGIMXGGXXXPQ*RGDPRPXXXGGGXGXXGGXGG 412
G+ GRG + G G GG RG R GG G GG GG
Sbjct: 6 GSRGGRGGSRGGRGGFNGGRGGFGGG------RGGARGGGRGGARGGRGGRGG 52
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 36.3 bits (80), Expect = 0.006
Identities = 13/23 (56%), Positives = 13/23 (56%)
Frame = +3
Query: 813 PPXPPPPPPXXXPXPPPXXXPPP 881
PP PPPPP PPP PPP
Sbjct: 761 PPPPPPPPGVAGAGPPPPPPPPP 783
Score = 32.3 bits (70), Expect = 0.10
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = +3
Query: 810 PPPXPPPPPPXXXPXPPPXXXPP 878
PPP PPPP PPP PP
Sbjct: 761 PPPPPPPPGVAGAGPPPPPPPPP 783
Score = 29.5 bits (63), Expect = 0.73
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +3
Query: 810 PPPXPPPPPPXXXPXPPPXXXPP 878
P P P PPP PPP PP
Sbjct: 746 PAPIPVPPPAPIMGGPPPPPPPP 768
Score = 29.5 bits (63), Expect = 0.73
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +1
Query: 862 PXXXPXPXXXXPXXXPPXXXPPXPPPPXPPP 954
P P P PP PPPP PPP
Sbjct: 752 PPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 29.1 bits (62), Expect = 0.97
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +3
Query: 813 PPXPPPPPPXXXPXPPPXXXPPP 881
PP PPP P P P PPP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPP 754
Score = 28.3 bits (60), Expect = 1.7
Identities = 14/36 (38%), Positives = 14/36 (38%), Gaps = 4/36 (11%)
Frame = +1
Query: 859 PPXXXPXPXXXXPXXXPPXXXPPXP----PPPXPPP 954
PP P P P PP P PPP PPP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPP 767
Score = 28.3 bits (60), Expect = 1.7
Identities = 12/32 (37%), Positives = 12/32 (37%)
Frame = +1
Query: 859 PPXXXPXPXXXXPXXXPPXXXPPXPPPPXPPP 954
P P P PP PPPP PPP
Sbjct: 737 PAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPP 768
Score = 27.5 bits (58), Expect = 2.9
Identities = 14/48 (29%), Positives = 14/48 (29%)
Frame = +3
Query: 810 PPPXPPPPPPXXXPXPPPXXXPPPXXXXPXXXXXXXXXXXXXXXXPPP 953
PPP P P P P P P P P PPP
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPP 780
Score = 27.1 bits (57), Expect = 3.9
Identities = 13/34 (38%), Positives = 13/34 (38%), Gaps = 3/34 (8%)
Frame = +1
Query: 862 PXXXPXPXXXXPXXXPPXXXPPX---PPPPXPPP 954
P P P P PP PPPP PPP
Sbjct: 750 PVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 26.6 bits (56), Expect = 5.1
Identities = 12/25 (48%), Positives = 12/25 (48%), Gaps = 4/25 (16%)
Frame = +2
Query: 410 PPPXP----PXXPXPPPXXXGRGSP 472
PPP P P P PPP G G P
Sbjct: 752 PPPAPIMGGPPPPPPPPGVAGAGPP 776
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 35.1 bits (77), Expect = 0.015
Identities = 21/47 (44%), Positives = 22/47 (46%)
Frame = -2
Query: 671 GKXGGXXGGWXGGGGAXXGGXPXXGXGGRGVXGXEPXGVGAV*GXGG 531
G GG GG+ GG G GG P GG G G P G G G GG
Sbjct: 224 GGFGGGPGGFEGGPGGF-GGGPGGFGGGLGGFGGGPGGFGG--GPGG 267
Score = 35.1 bits (77), Expect = 0.015
Identities = 18/33 (54%), Positives = 18/33 (54%)
Frame = -3
Query: 880 GGGXXXGGGXGXXXGGGGGGXGGGXXGGGGXXG 782
GG GGG G GGG GG GGG G GG G
Sbjct: 235 GGPGGFGGGPG-GFGGGLGGFGGGPGGFGGGPG 266
Score = 35.1 bits (77), Expect = 0.015
Identities = 17/35 (48%), Positives = 17/35 (48%)
Frame = -3
Query: 895 GXXXXGGGXXXGGGXGXXXGGGGGGXGGGXXGGGG 791
G GGG GG GGG GG GGG G GG
Sbjct: 236 GPGGFGGGPGGFGGGLGGFGGGPGGFGGGPGGHGG 270
Score = 33.9 bits (74), Expect = 0.034
Identities = 17/38 (44%), Positives = 17/38 (44%)
Frame = -3
Query: 895 GXXXXGGGXXXGGGXGXXXGGGGGGXGGGXXGGGGXXG 782
G GGG G GGG GG GGG G GG G
Sbjct: 222 GHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPG 259
Score = 33.1 bits (72), Expect = 0.059
Identities = 17/33 (51%), Positives = 17/33 (51%)
Frame = -3
Query: 880 GGGXXXGGGXGXXXGGGGGGXGGGXXGGGGXXG 782
GG GGG G GG GG GGG G GG G
Sbjct: 221 GGHGGFGGGPGGFE-GGPGGFGGGPGGFGGGLG 252
Score = 31.1 bits (67), Expect = 0.24
Identities = 21/54 (38%), Positives = 22/54 (40%), Gaps = 1/54 (1%)
Frame = -2
Query: 671 GKXGGXXGGWXGG-GGAXXGGXPXXGXGGRGVXGXEPXGVGAV*GXGGXXXIEG 513
G GG GG+ GG GG G G GG G G G G GG EG
Sbjct: 184 GHNGGGFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGF--GGGPGGFEG 235
Score = 30.7 bits (66), Expect = 0.32
Identities = 22/59 (37%), Positives = 22/59 (37%), Gaps = 1/59 (1%)
Frame = -2
Query: 671 GKXGGXXG-GWXGGGGAXXGGXPXXGXGGRGVXGXEPXGVGAV*GXGGXXXIEGXXSXG 498
G GG G G GG GG P GG G G P G G G GG G G
Sbjct: 208 GGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGG--GLGGFGGGPGGFGGG 264
Score = 27.5 bits (58), Expect = 2.9
Identities = 14/27 (51%), Positives = 14/27 (51%)
Frame = -3
Query: 862 GGGXGXXXGGGGGGXGGGXXGGGGXXG 782
GGG G GGG GG G G GG G
Sbjct: 187 GGGFGGF-GGGSGGPPPGPGGFGGFGG 212
Score = 26.6 bits (56), Expect = 5.1
Identities = 18/48 (37%), Positives = 18/48 (37%), Gaps = 2/48 (4%)
Frame = -2
Query: 689 GXXXXXGKXGGXXGG--WXGGGGAXXGGXPXXGXGGRGVXGXEPXGVG 552
G G GG GG GGG GG GG G G P G G
Sbjct: 222 GHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPGGFGGGPGGHG 269
Score = 25.8 bits (54), Expect = 9.0
Identities = 19/54 (35%), Positives = 19/54 (35%), Gaps = 1/54 (1%)
Frame = -2
Query: 689 GXXXXXGKXGGXXGGWXGGGGAXXGGXPXXGXGGRGVXGXEPXGV-GAV*GXGG 531
G G GG G G GG G GG G G P G G G GG
Sbjct: 189 GFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGG 242
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 34.7 bits (76), Expect = 0.019
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = +3
Query: 810 PPPXPPPPPPXXXPXPPPXXXPPP 881
PP PPPPPP PP PPP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPP 28
Score = 32.7 bits (71), Expect = 0.078
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = +1
Query: 880 PXXXXPXXXPPXXXPPXPPPPXPPP 954
P P PP PP PPP PPP
Sbjct: 6 PGNPPPPPPPPGFEPPSQPPPPPPP 30
Score = 29.1 bits (62), Expect = 0.97
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +1
Query: 862 PXXXPXPXXXXPXXXPPXXXPPXPPP 939
P P P P PP PP PPP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPPP 30
Score = 28.7 bits (61), Expect = 1.3
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = +3
Query: 813 PPXPPPPPPXXXPXPPPXXXPPPXXXXP 896
PP PPPPP PPP PP P
Sbjct: 5 PPGNPPPPP-----PPPGFEPPSQPPPP 27
Score = 26.2 bits (55), Expect = 6.8
Identities = 10/25 (40%), Positives = 10/25 (40%)
Frame = +1
Query: 880 PXXXXPXXXPPXXXPPXPPPPXPPP 954
P P PP P PP PPP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPP 29
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 33.9 bits (74), Expect = 0.034
Identities = 14/26 (53%), Positives = 14/26 (53%), Gaps = 2/26 (7%)
Frame = +3
Query: 810 PPPXPPPPPPXXXPXP--PPXXXPPP 881
PPP PPPP P P PP PPP
Sbjct: 1709 PPPMSVPPPPSAPPMPAGPPSAPPPP 1734
Score = 29.1 bits (62), Expect = 0.97
Identities = 13/29 (44%), Positives = 13/29 (44%), Gaps = 2/29 (6%)
Frame = +3
Query: 816 PXPPPPPPXXXPXP--PPXXXPPPXXXXP 896
P PPPPP P P PP PP P
Sbjct: 1705 PTPPPPPMSVPPPPSAPPMPAGPPSAPPP 1733
Score = 27.5 bits (58), Expect = 2.9
Identities = 11/29 (37%), Positives = 11/29 (37%)
Frame = +3
Query: 810 PPPXPPPPPPXXXPXPPPXXXPPPXXXXP 896
P PP P PPP PPP P
Sbjct: 1694 PQSAAPPQMSAPTPPPPPMSVPPPPSAPP 1722
Score = 27.5 bits (58), Expect = 2.9
Identities = 13/34 (38%), Positives = 13/34 (38%), Gaps = 2/34 (5%)
Frame = +1
Query: 859 PPXXXPXPXXXXPXXXPPXXXPPXP--PPPXPPP 954
P P P PP PP P PP PPP
Sbjct: 1700 PQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPP 1733
Score = 27.1 bits (57), Expect = 3.9
Identities = 11/29 (37%), Positives = 11/29 (37%)
Frame = +3
Query: 810 PPPXPPPPPPXXXPXPPPXXXPPPXXXXP 896
P P PPP PPP PP P
Sbjct: 1700 PQMSAPTPPPPPMSVPPPPSAPPMPAGPP 1728
Score = 27.1 bits (57), Expect = 3.9
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +3
Query: 810 PPPXPPPPPPXXXPXPPPXXXP 875
PPP PP P P PP P
Sbjct: 1715 PPPPSAPPMPAGPPSAPPPPLP 1736
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 29.1 bits (62), Expect = 0.97
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +1
Query: 859 PPXXXPXPXXXXPXXXPPXXXPPXPPPPXPP 951
PP P P P P PPPP PP
Sbjct: 167 PPPSFQPPSAAAPATSLPSDYNPPPPPPPPP 197
Score = 28.7 bits (61), Expect = 1.3
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +1
Query: 880 PXXXXPXXXPPXXXPPXPPPPXPPP 954
P P P PP PPPP PP
Sbjct: 224 PPTYTPKQADPLPAPPPPPPPTLPP 248
Score = 26.6 bits (56), Expect = 5.1
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = +3
Query: 810 PPPXPPPPPPXXXP 851
P P PPPPPP P
Sbjct: 234 PLPAPPPPPPPTLP 247
Score = 26.2 bits (55), Expect(2) = 0.099
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +3
Query: 810 PPPXPPPPP 836
PPP PPPPP
Sbjct: 189 PPPPPPPPP 197
Score = 26.2 bits (55), Expect(2) = 0.17
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +3
Query: 813 PPXPPPPPP 839
PP PPPPPP
Sbjct: 189 PPPPPPPPP 197
Score = 24.6 bits (51), Expect(2) = 0.099
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = +3
Query: 813 PPXPPPPPPXXXP 851
P PPPPPP P
Sbjct: 236 PAPPPPPPPTLPP 248
Score = 23.8 bits (49), Expect(2) = 0.17
Identities = 8/15 (53%), Positives = 8/15 (53%)
Frame = +3
Query: 816 PXPPPPPPXXXPXPP 860
P P PPPP PP
Sbjct: 234 PLPAPPPPPPPTLPP 248
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 31.9 bits (69), Expect = 0.14
Identities = 18/40 (45%), Positives = 18/40 (45%), Gaps = 2/40 (5%)
Frame = -3
Query: 895 GXXXXGGGXXXGGGXGXXXGGGGGGXGGGXXGG--GGXXG 782
G G G GG G GG GGG GG GG GG G
Sbjct: 141 GGFRGGRGGSRGGFGGNSRGGFGGGSRGGFGGGSRGGSRG 180
Score = 29.9 bits (64), Expect = 0.55
Identities = 17/40 (42%), Positives = 17/40 (42%), Gaps = 2/40 (5%)
Frame = -3
Query: 895 GXXXXGGGXXXGGGXGXXXGGGGGGXGGGXXGG--GGXXG 782
G GG GG G GG GG GG GG GG G
Sbjct: 133 GPAGRGGRGGFRGGRGGSRGGFGGNSRGGFGGGSRGGFGG 172
Score = 28.7 bits (61), Expect = 1.3
Identities = 15/33 (45%), Positives = 15/33 (45%), Gaps = 2/33 (6%)
Frame = -3
Query: 874 GXXXGGGXGXXXGGGGGGXGGGXXGG--GGXXG 782
G GG G GG GG GG GG GG G
Sbjct: 160 GGFGGGSRGGFGGGSRGGSRGGFRGGSRGGFRG 192
Score = 27.9 bits (59), Expect = 2.2
Identities = 15/34 (44%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Frame = -3
Query: 880 GGGXXXGGGXGXXXGGGGGGXGGGXXG-GGGXXG 782
GG G G G G GGG GG G GG G
Sbjct: 155 GGNSRGGFGGGSRGGFGGGSRGGSRGGFRGGSRG 188
Score = 27.1 bits (57), Expect = 3.9
Identities = 14/28 (50%), Positives = 14/28 (50%)
Frame = -3
Query: 880 GGGXXXGGGXGXXXGGGGGGXGGGXXGG 797
GGG G G G GG GG GG GG
Sbjct: 163 GGGSRGGFG-GGSRGGSRGGFRGGSRGG 189
>SPBC8D2.18c |||adenosylhomocysteinase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 433
Score = 29.9 bits (64), Expect = 0.55
Identities = 23/78 (29%), Positives = 35/78 (44%), Gaps = 5/78 (6%)
Frame = +2
Query: 77 RSVLFLTTGFLF-AACLTS----VMSDKPTTKPICEQAFWNSGPCFAYIXAILVQSEDEE 241
R ++ L G L C T VMS T + + + A W + +L + DEE
Sbjct: 335 RHIILLADGRLVNLGCATGHPSFVMSCSFTNQVLAQIALWTDNTSYPLGVHMLPKKLDEE 394
Query: 242 V*RIHLRRLPXGTTIVSS 295
V R+HL +L T ++S
Sbjct: 395 VARLHLGKLGVKLTTLTS 412
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 28.7 bits (61), Expect = 1.3
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = +1
Query: 874 PXPXXXXPXXXPPXXXPPXPPPPXPPP 954
P P P P PP PPP PP
Sbjct: 1192 PPPSEAPPVPKPSVGVPPVPPPSTAPP 1218
Score = 27.5 bits (58), Expect = 2.9
Identities = 13/32 (40%), Positives = 13/32 (40%), Gaps = 5/32 (15%)
Frame = +1
Query: 874 PXPXXXXPXXXPPXXXPPXPPP-----PXPPP 954
P P P PP PP P P P PPP
Sbjct: 1182 PKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPP 1213
Score = 26.2 bits (55), Expect = 6.8
Identities = 11/31 (35%), Positives = 11/31 (35%)
Frame = +1
Query: 862 PXXXPXPXXXXPXXXPPXXXPPXPPPPXPPP 954
P P P P P PP P P PP
Sbjct: 1063 PPPVPAPSSEIPSIPAPSGAPPVPAPSGIPP 1093
Score = 26.2 bits (55), Expect = 6.8
Identities = 12/27 (44%), Positives = 12/27 (44%), Gaps = 4/27 (14%)
Frame = +3
Query: 810 PPPXPPPPPPXXX----PXPPPXXXPP 878
PPP PP P P PPP PP
Sbjct: 1192 PPPSEAPPVPKPSVGVPPVPPPSTAPP 1218
Score = 25.8 bits (54), Expect = 9.0
Identities = 12/32 (37%), Positives = 12/32 (37%)
Frame = +1
Query: 859 PPXXXPXPXXXXPXXXPPXXXPPXPPPPXPPP 954
PP P P P PP PPP PP
Sbjct: 1169 PPVPAPSSGIP-PVPKPAAGVPPVPPPSEAPP 1199
>SPAC26A3.16 |dph1|ucp5|UBA domain protein Dph1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 354
Score = 28.3 bits (60), Expect = 1.7
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = -3
Query: 877 GGXXXGGGXGXXXGGGGGGXGGGXXGGGGXXG 782
GG G G G G G GG GG G G
Sbjct: 225 GGGLGGAGLGGLGGAGLGGFGGANNATAGIAG 256
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 26.2 bits (55), Expect = 6.8
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +3
Query: 810 PPPXPPPPP 836
PPP PPPPP
Sbjct: 945 PPPPPPPPP 953
Score = 26.2 bits (55), Expect = 6.8
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +3
Query: 813 PPXPPPPPP 839
PP PPPPPP
Sbjct: 945 PPPPPPPPP 953
Score = 23.4 bits (48), Expect(2) = 2.8
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +1
Query: 931 PPPPXPPP 954
PPPP PPP
Sbjct: 946 PPPPPPPP 953
Score = 22.2 bits (45), Expect(2) = 2.8
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = +1
Query: 910 PXXXPPXPPPP 942
P PP PPPP
Sbjct: 942 PAFPPPPPPPP 952
>SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1217
Score = 23.4 bits (48), Expect(2) = 2.9
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +1
Query: 931 PPPPXPPP 954
PPPP PPP
Sbjct: 1095 PPPPPPPP 1102
Score = 22.2 bits (45), Expect(2) = 2.9
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = +1
Query: 910 PXXXPPXPPPP 942
P PP PPPP
Sbjct: 1091 PSAVPPPPPPP 1101
>SPAC17C9.07 |alg8||glucosyltransferase Alg8|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 501
Score = 27.5 bits (58), Expect = 2.9
Identities = 16/60 (26%), Positives = 29/60 (48%)
Frame = +2
Query: 29 ILKILDIXY*IRDVMLRSVLFLTTGFLFAACLTSVMSDKPTTKPICEQAFWNSGPCFAYI 208
+L +DI +++ + F GFLF L S++ KP + A +++ CF +I
Sbjct: 132 LLTAIDIFLSPGLLIIDHIHFQYNGFLFGLLLWSIVLAKPEKNMLLSAAIFSALICFKHI 191
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 27.5 bits (58), Expect = 2.9
Identities = 13/34 (38%), Positives = 13/34 (38%), Gaps = 2/34 (5%)
Frame = +1
Query: 859 PPXXXPXPXXXXPXXXP--PXXXPPXPPPPXPPP 954
PP P P P P PP PP PPP
Sbjct: 172 PPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPPP 205
Score = 27.1 bits (57), Expect = 3.9
Identities = 13/47 (27%), Positives = 13/47 (27%)
Frame = +3
Query: 813 PPXPPPPPPXXXPXPPPXXXPPPXXXXPXXXXXXXXXXXXXXXXPPP 953
PP P PP PPP P P PPP
Sbjct: 158 PPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPP 204
Score = 26.6 bits (56), Expect = 5.1
Identities = 11/29 (37%), Positives = 11/29 (37%)
Frame = +3
Query: 810 PPPXPPPPPPXXXPXPPPXXXPPPXXXXP 896
PP P PP P PP P P P
Sbjct: 124 PPSAPAPPTPQSELRPPTSAPPRPSIPPP 152
Score = 26.2 bits (55), Expect = 6.8
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +3
Query: 816 PXPPPPPPXXXPXPPPXXXPPP 881
P PPPPPP P P PP
Sbjct: 3 PAPPPPPP--APAPAAAAPAPP 22
Score = 26.2 bits (55), Expect = 6.8
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = +3
Query: 810 PPPXPPPPPPXXXPXPP 860
PPP P P P P PP
Sbjct: 6 PPPPPAPAPAAAAPAPP 22
Score = 26.2 bits (55), Expect = 6.8
Identities = 11/31 (35%), Positives = 11/31 (35%)
Frame = +1
Query: 862 PXXXPXPXXXXPXXXPPXXXPPXPPPPXPPP 954
P P P PP PP P P P P
Sbjct: 124 PPSAPAPPTPQSELRPPTSAPPRPSIPPPSP 154
Score = 25.8 bits (54), Expect = 9.0
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = +3
Query: 810 PPPXPPPPPPXXXPXPPP 863
PPP PP P P PP
Sbjct: 5 PPPPPPAPAPAAAAPAPP 22
>SPBC119.05c |||Wiskott-Aldrich syndrome homolog binding protein
Lsb1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 296
Score = 26.6 bits (56), Expect = 5.1
Identities = 14/48 (29%), Positives = 15/48 (31%)
Frame = +2
Query: 410 PPPXPPXXPXPPPXXXGRGSPLH*GXXXPPXMXPXPR*XXXPXXPTLP 553
PPP PP PP + PP P P P P P
Sbjct: 206 PPPPPPQQNYPPAASSSAPPMQYQQTAYPPQQAPYPPVQAYPQAPQQP 253
>SPBC543.02c |||DNAJ/TPR domain protein DNAJC7
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 476
Score = 26.6 bits (56), Expect = 5.1
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = -3
Query: 895 GXXXXGGGXXXGGGXGXXXGGGGGGXGGGXXG 800
G GGG GG G G G GGG G
Sbjct: 438 GGSFPGGGFPGGGFPGGSYNSQGFGMGGGFPG 469
>SPBC1347.05c |||DNAJ domain protein Scj1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 381
Score = 26.2 bits (55), Expect = 6.8
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -3
Query: 856 GXGXXXGGGGGGXGGGXXGGG 794
G GG GGG G G GGG
Sbjct: 75 GLNGQPGGPGGGPGEGFPGGG 95
>SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein
Cap1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 551
Score = 26.2 bits (55), Expect = 6.8
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +3
Query: 810 PPPXPPPPP 836
PPP PPPPP
Sbjct: 306 PPPPPPPPP 314
Score = 26.2 bits (55), Expect = 6.8
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +3
Query: 813 PPXPPPPPP 839
PP PPPPPP
Sbjct: 306 PPPPPPPPP 314
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 25.8 bits (54), Expect = 9.0
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = +3
Query: 810 PPPXPPPPPPXXXPXPPP 863
PP PP PP P PP
Sbjct: 420 PPSLPPSAPPSLPPSAPP 437
Score = 25.8 bits (54), Expect = 9.0
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +3
Query: 816 PXPPPPPPXXXPXPPPXXXPPP 881
P PP PP P PPP P P
Sbjct: 464 PAAPPLPPAA-PAPPPAPAPAP 484
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 25.8 bits (54), Expect = 9.0
Identities = 10/25 (40%), Positives = 10/25 (40%)
Frame = +3
Query: 822 PPPPPPXXXPXPPPXXXPPPXXXXP 896
PPPPPP P P P P
Sbjct: 1882 PPPPPPMALPKAGPPSAAPTSALPP 1906
>SPCC830.07c |psi1|psi|DNAJ domain protein Psi1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 379
Score = 25.8 bits (54), Expect = 9.0
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -3
Query: 832 GGGGXGGGXXGGGG 791
GGGG GGG G GG
Sbjct: 135 GGGGMGGGMGGMGG 148
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,304,628
Number of Sequences: 5004
Number of extensions: 40555
Number of successful extensions: 602
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 104
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 396
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 487313384
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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