Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_A16
         (876 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            28   0.43 
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    24   5.3  

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 27.9 bits (59), Expect = 0.43
 Identities = 11/24 (45%), Positives = 11/24 (45%)
 Frame = +2

Query: 755 PXLXPPXXPPXPPRPXAXXPPPPP 826
           P L     PP PP P    PPP P
Sbjct: 574 PNLPNAQPPPAPPPPPPMGPPPSP 597



 Score = 23.4 bits (48), Expect = 9.2
 Identities = 13/40 (32%), Positives = 13/40 (32%)
 Frame = +2

Query: 755 PXLXPPXXPPXPPRPXAXXPPPPPXXKKTKXXXGPXPQXP 874
           P   PP  PP PP      PP P          G  P  P
Sbjct: 577 PNAQPPPAPPPPP--PMGPPPSPLAGGPLGGPAGSRPPLP 614


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 24.2 bits (50), Expect = 5.3
 Identities = 11/30 (36%), Positives = 13/30 (43%), Gaps = 2/30 (6%)
 Frame = +2

Query: 782 PXPPRPXAXXPPPP--PXXKKTKXXXGPXP 865
           P PPRP    P PP  P   + +   G  P
Sbjct: 209 PQPPRPGGMYPQPPGVPMPMRPQMPPGAVP 238


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 619,105
Number of Sequences: 2352
Number of extensions: 10473
Number of successful extensions: 20
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 93853377
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)