Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP03_F_A15
(858 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q3UA25 Cluster: Bone marrow macrophage cDNA, RIKEN full... 106 8e-22
UniRef50_P62241 Cluster: 40S ribosomal protein S8; n=93; Eukaryo... 106 8e-22
UniRef50_Q5JR95 Cluster: Ribosomal protein S8; n=8; Euteleostomi... 100 4e-20
UniRef50_Q08069 Cluster: 40S ribosomal protein S8; n=21; Eukaryo... 95 3e-18
UniRef50_Q4N3P0 Cluster: 40S ribosomal protein S8; n=4; Eukaryot... 91 3e-17
UniRef50_Q8MLY8 Cluster: 40S ribosomal protein S8; n=82; Eukaryo... 90 6e-17
UniRef50_P25204 Cluster: 40S ribosomal protein S8; n=19; Eukaryo... 88 2e-16
UniRef50_Q6QP50 Cluster: Putative 40S ribosomal protein S8; n=1;... 87 7e-16
UniRef50_Q7R1W8 Cluster: Ribosomal protein S8; n=1; Giardia lamb... 72 2e-11
UniRef50_UPI000049933B Cluster: conserved hypothetical protein; ... 67 6e-10
UniRef50_A6RAQ0 Cluster: Ribosomal protein S8; n=1; Ajellomyces ... 66 1e-09
UniRef50_Q8SWC9 Cluster: Ribosomal protein S8; n=1; Encephalitoz... 63 1e-08
UniRef50_Q4SV68 Cluster: Chromosome undetermined SCAF13783, whol... 61 4e-08
UniRef50_Q5C1R4 Cluster: SJCHGC03085 protein; n=1; Schistosoma j... 54 5e-06
UniRef50_Q9AW20 Cluster: 40S ribosomal protein S8; n=1; Guillard... 54 6e-06
UniRef50_Q3LVX9 Cluster: Ribosomal protein S8; n=1; Bigelowiella... 46 0.001
UniRef50_Q8TV55 Cluster: 30S ribosomal protein S8e; n=1; Methano... 40 0.061
UniRef50_Q6L0D3 Cluster: 30S ribosomal protein S8e; n=7; Archaea... 37 0.75
UniRef50_A3CSQ2 Cluster: 30S ribosomal protein S8e; n=5; Archaea... 37 0.75
UniRef50_A5E7M6 Cluster: Putative uncharacterized protein; n=1; ... 35 3.0
UniRef50_Q9HJD0 Cluster: 30S ribosomal protein S8e; n=5; Euryarc... 35 3.0
UniRef50_UPI0000DB7956 Cluster: PREDICTED: similar to Deformed C... 34 4.0
UniRef50_UPI0000F32D0C Cluster: Zinc finger CCCH domain-containi... 34 4.0
UniRef50_O58830 Cluster: 30S ribosomal protein S8e; n=6; Archaea... 34 5.3
UniRef50_Q980W3 Cluster: 30S ribosomal protein S8e; n=4; Archaea... 33 9.2
>UniRef50_Q3UA25 Cluster: Bone marrow macrophage cDNA, RIKEN
full-length enriched library, clone:I830031J02
product:ribosomal protein S8, full insert sequence; n=9;
Deuterostomia|Rep: Bone marrow macrophage cDNA, RIKEN
full-length enriched library, clone:I830031J02
product:ribosomal protein S8, full insert sequence - Mus
musculus (Mouse)
Length = 152
Score = 106 bits (254), Expect = 8e-22
Identities = 55/86 (63%), Positives = 60/86 (69%), Gaps = 1/86 (1%)
Frame = +3
Query: 108 GNVRPYARRGSMS*GVPL-QTPGSVLSVSTPXRSRGGNTKYRALRLDTGNFSWGSECSTR 284
G +PY ++ G P T + T R RGGN KYRALRLD GNFSWGSEC TR
Sbjct: 16 GKRKPYHKKRKYELGRPAANTKIGPRRIHT-VRVRGGNKKYRALRLDVGNFSWGSECCTR 74
Query: 285 KTRIIDVVYNASNNELVRTKTLVQEC 362
KTRIIDVVYNASNNELVRTKTLV+ C
Sbjct: 75 KTRIIDVVYNASNNELVRTKTLVKNC 100
Score = 87.0 bits (206), Expect = 5e-16
Identities = 37/56 (66%), Positives = 45/56 (80%)
Frame = +1
Query: 343 RPLFKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEEAIINKKRXQKTARXY 510
+ L KN IV++D+TP+RQWYESHY LPLGRKKGAKLT EE I+NKKR +K + Y
Sbjct: 94 KTLVKNCIVLIDSTPYRQWYESHYALPLGRKKGAKLTPEEEEILNKKRSKKIQKKY 149
Score = 86.6 bits (205), Expect = 7e-16
Identities = 36/45 (80%), Positives = 41/45 (91%)
Frame = +2
Query: 62 MGISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHS 196
MGISRD+WHKRR TGGKR P KKRKYELGRPAANT++GP+RIH+
Sbjct: 1 MGISRDNWHKRRKTGGKRKPYHKKRKYELGRPAANTKIGPRRIHT 45
>UniRef50_P62241 Cluster: 40S ribosomal protein S8; n=93;
Eukaryota|Rep: 40S ribosomal protein S8 - Homo sapiens
(Human)
Length = 208
Score = 106 bits (254), Expect = 8e-22
Identities = 55/86 (63%), Positives = 60/86 (69%), Gaps = 1/86 (1%)
Frame = +3
Query: 108 GNVRPYARRGSMS*GVPL-QTPGSVLSVSTPXRSRGGNTKYRALRLDTGNFSWGSECSTR 284
G +PY ++ G P T + T R RGGN KYRALRLD GNFSWGSEC TR
Sbjct: 16 GKRKPYHKKRKYELGRPAANTKIGPRRIHT-VRVRGGNKKYRALRLDVGNFSWGSECCTR 74
Query: 285 KTRIIDVVYNASNNELVRTKTLVQEC 362
KTRIIDVVYNASNNELVRTKTLV+ C
Sbjct: 75 KTRIIDVVYNASNNELVRTKTLVKNC 100
Score = 100 bits (240), Expect = 4e-20
Identities = 45/76 (59%), Positives = 56/76 (73%)
Frame = +1
Query: 343 RPLFKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEEAIINKKRXQKTARXYLARQ 522
+ L KN IV++D+TP+RQWYESHY LPLGRKKGAKLT EE I+NKKR +K + Y R+
Sbjct: 94 KTLVKNCIVLIDSTPYRQWYESHYALPLGRKKGAKLTPEEEEILNKKRSKKIQKKYDERK 153
Query: 523 RLAKVXGALXEQFHTG 570
+ AK+ L EQF G
Sbjct: 154 KNAKISSLLEEQFQQG 169
Score = 86.6 bits (205), Expect = 7e-16
Identities = 36/45 (80%), Positives = 41/45 (91%)
Frame = +2
Query: 62 MGISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHS 196
MGISRD+WHKRR TGGKR P KKRKYELGRPAANT++GP+RIH+
Sbjct: 1 MGISRDNWHKRRKTGGKRKPYHKKRKYELGRPAANTKIGPRRIHT 45
Score = 66.9 bits (156), Expect = 6e-10
Identities = 28/48 (58%), Positives = 37/48 (77%)
Frame = +2
Query: 533 RLXVLXKSNSTRGXLLACVASXPGQCGRADGYILQGXELQFYLRXIKS 676
++ L + +G LLAC+AS PGQCGRADGY+L+G EL+FYLR IK+
Sbjct: 157 KISSLLEEQFQQGKLLACIASRPGQCGRADGYVLEGKELEFYLRKIKA 204
>UniRef50_Q5JR95 Cluster: Ribosomal protein S8; n=8;
Euteleostomi|Rep: Ribosomal protein S8 - Homo sapiens
(Human)
Length = 188
Score = 100 bits (240), Expect = 4e-20
Identities = 45/76 (59%), Positives = 56/76 (73%)
Frame = +1
Query: 343 RPLFKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEEAIINKKRXQKTARXYLARQ 522
+ L KN IV++D+TP+RQWYESHY LPLGRKKGAKLT EE I+NKKR +K + Y R+
Sbjct: 74 KTLVKNCIVLIDSTPYRQWYESHYALPLGRKKGAKLTPEEEEILNKKRSKKIQKKYDERK 133
Query: 523 RLAKVXGALXEQFHTG 570
+ AK+ L EQF G
Sbjct: 134 KNAKISSLLEEQFQQG 149
Score = 86.6 bits (205), Expect = 7e-16
Identities = 36/45 (80%), Positives = 41/45 (91%)
Frame = +2
Query: 62 MGISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHS 196
MGISRD+WHKRR TGGKR P KKRKYELGRPAANT++GP+RIH+
Sbjct: 1 MGISRDNWHKRRKTGGKRKPYHKKRKYELGRPAANTKIGPRRIHT 45
Score = 66.9 bits (156), Expect = 6e-10
Identities = 28/48 (58%), Positives = 37/48 (77%)
Frame = +2
Query: 533 RLXVLXKSNSTRGXLLACVASXPGQCGRADGYILQGXELQFYLRXIKS 676
++ L + +G LLAC+AS PGQCGRADGY+L+G EL+FYLR IK+
Sbjct: 137 KISSLLEEQFQQGKLLACIASRPGQCGRADGYVLEGKELEFYLRKIKA 184
Score = 58.8 bits (136), Expect = 2e-07
Identities = 33/49 (67%), Positives = 35/49 (71%)
Frame = +3
Query: 216 NTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVQEC 362
NTK R+ T G C TRKTRIIDVVYNASNNELVRTKTLV+ C
Sbjct: 35 NTKIGPRRIHTVRVRGG--C-TRKTRIIDVVYNASNNELVRTKTLVKNC 80
>UniRef50_Q08069 Cluster: 40S ribosomal protein S8; n=21;
Eukaryota|Rep: 40S ribosomal protein S8 - Zea mays
(Maize)
Length = 221
Score = 94.7 bits (225), Expect = 3e-18
Identities = 43/52 (82%), Positives = 48/52 (92%)
Frame = +3
Query: 201 RSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVQ 356
R RGGN K+RALRLDTGN+SWGSE TRKTRI+DVVYNASNNELVRT+TLV+
Sbjct: 48 RVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVK 99
Score = 62.5 bits (145), Expect = 1e-08
Identities = 29/42 (69%), Positives = 32/42 (76%)
Frame = +2
Query: 62 MGISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTRLGPQR 187
MGISRD HKRRATGGK+ RKKRKYELGR ANT+L +
Sbjct: 1 MGISRDSMHKRRATGGKQKAWRKKRKYELGRQPANTKLSSNK 42
Score = 60.1 bits (139), Expect = 7e-08
Identities = 23/35 (65%), Positives = 31/35 (88%)
Frame = +2
Query: 569 GXLLACVASXPGQCGRADGYILQGXELQFYLRXIK 673
G LLAC++S PGQCGRADGYIL+G EL+FY++ ++
Sbjct: 178 GRLLACISSRPGQCGRADGYILEGKELEFYMKKLQ 212
Score = 48.4 bits (110), Expect = 2e-04
Identities = 30/82 (36%), Positives = 41/82 (50%), Gaps = 8/82 (9%)
Frame = +1
Query: 349 LFKNAIVVVDATPFRQWYESHYTLPLGRKK--------GAKLTEAEEAIINKKRXQKTAR 504
L K+AIV VDA PF+QWY +HY + +GRKK A+ E E A K+ R
Sbjct: 97 LVKSAIVQVDAAPFKQWYLTHYGVDIGRKKKTPAAKKDNAEGQEVEAAAEETKKSNHVTR 156
Query: 505 XYLARQRLAKVXGALXEQFHTG 570
R+ + + EQF +G
Sbjct: 157 KLEKRKEGRTLDPHIEEQFGSG 178
>UniRef50_Q4N3P0 Cluster: 40S ribosomal protein S8; n=4;
Eukaryota|Rep: 40S ribosomal protein S8 - Theileria
parva
Length = 188
Score = 91.1 bits (216), Expect = 3e-17
Identities = 41/52 (78%), Positives = 48/52 (92%)
Frame = +3
Query: 201 RSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVQ 356
R RGGN K+RALRLD+GNFSWGS+ TRKTR++DVVYNAS+NELVRTKTLV+
Sbjct: 47 RCRGGNLKFRALRLDSGNFSWGSQNVTRKTRVMDVVYNASSNELVRTKTLVK 98
Score = 60.9 bits (141), Expect = 4e-08
Identities = 27/43 (62%), Positives = 34/43 (79%)
Frame = +2
Query: 62 MGISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTRLGPQRI 190
MGISRD HKRR TGG+ +KKRKYELGRP++NT+LG + +
Sbjct: 1 MGISRDSRHKRRLTGGRYPVHKKKRKYELGRPSSNTKLGSKLV 43
Score = 56.0 bits (129), Expect = 1e-06
Identities = 22/32 (68%), Positives = 26/32 (81%)
Frame = +2
Query: 569 GXLLACVASXPGQCGRADGYILQGXELQFYLR 664
G LLAC++S PGQCGR DGY+L+G EL FY R
Sbjct: 149 GRLLACISSRPGQCGRCDGYVLEGEELNFYRR 180
Score = 45.6 bits (103), Expect = 0.002
Identities = 24/60 (40%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Frame = +1
Query: 256 SLGDRNVQLAKPVSLMLCIMHLTMNWCVQ-RPLFKNAIVVVDATPFRQWYESHYTLPLGR 432
S G +NV + +M + + + N V+ + L KNAIV VD TPF+ W+++HY L LG+
Sbjct: 66 SWGSQNV--TRKTRVMDVVYNASSNELVRTKTLVKNAIVTVDPTPFKLWFKTHYGLELGK 123
>UniRef50_Q8MLY8 Cluster: 40S ribosomal protein S8; n=82;
Eukaryota|Rep: 40S ribosomal protein S8 - Drosophila
melanogaster (Fruit fly)
Length = 208
Score = 90.2 bits (214), Expect = 6e-17
Identities = 41/78 (52%), Positives = 55/78 (70%), Gaps = 2/78 (2%)
Frame = +1
Query: 343 RPLFKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEEA--IINKKRXQKTARXYLA 516
+ L KN+IVV+DATPFRQWYE+HY LPLGRK+ K + E+ ++ KKR +K + YL
Sbjct: 94 KTLVKNSIVVIDATPFRQWYEAHYVLPLGRKRNPKHAQKEDENDVLTKKRSEKVMKKYLE 153
Query: 517 RQRLAKVXGALXEQFHTG 570
RQ+ KV AL +QF +G
Sbjct: 154 RQKYGKVEQALEDQFTSG 171
Score = 89.8 bits (213), Expect = 8e-17
Identities = 42/52 (80%), Positives = 46/52 (88%)
Frame = +3
Query: 201 RSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVQ 356
R+RGGNTK RALRL+TGNF+W SE RKTRI DVVYNASNNELVRTKTLV+
Sbjct: 47 RTRGGNTKLRALRLETGNFAWASEGVARKTRIADVVYNASNNELVRTKTLVK 98
Score = 76.2 bits (179), Expect = 1e-12
Identities = 34/44 (77%), Positives = 38/44 (86%)
Frame = +2
Query: 62 MGISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTRLGPQRIH 193
MGISRD HKRRATGGKR +RKKRK+ELGRPAANT+LG R+H
Sbjct: 1 MGISRDSAHKRRATGGKRKSLRKKRKFELGRPAANTKLGSGRVH 44
Score = 64.5 bits (150), Expect = 3e-09
Identities = 26/38 (68%), Positives = 33/38 (86%)
Frame = +2
Query: 563 TRGXLLACVASXPGQCGRADGYILQGXELQFYLRXIKS 676
T G +LAC++S PGQCGR+DGYIL+G EL+FYL+ IKS
Sbjct: 169 TSGRILACISSRPGQCGRSDGYILEGKELEFYLKKIKS 206
>UniRef50_P25204 Cluster: 40S ribosomal protein S8; n=19;
Eukaryota|Rep: 40S ribosomal protein S8 - Leishmania
major
Length = 220
Score = 88.2 bits (209), Expect = 2e-16
Identities = 38/57 (66%), Positives = 47/57 (82%)
Frame = +3
Query: 192 TPXRSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVQEC 362
+P R+RGGN K RALRLDTGNF+W SE + R++DVVYNA++NELVRTKTLV+ C
Sbjct: 44 SPVRARGGNFKIRALRLDTGNFAWASEAIAHRVRLLDVVYNATSNELVRTKTLVKNC 100
Score = 51.2 bits (117), Expect = 3e-05
Identities = 25/43 (58%), Positives = 29/43 (67%)
Frame = +2
Query: 62 MGISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTRLGPQRI 190
MGI R HKR+ TGGK RK+ K ELGR ANTRLG +R+
Sbjct: 1 MGIVRSRLHKRKITGGKTKIHRKRMKAELGRLPANTRLGARRV 43
Score = 47.6 bits (108), Expect = 4e-04
Identities = 29/75 (38%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Frame = +1
Query: 280 LAKPVSLMLCIMHLTMNWCVQ-RPLFKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTE 456
+A V L+ + + T N V+ + L KN IV VDA PF++WY HY + L K K T+
Sbjct: 72 IAHRVRLLDVVYNATSNELVRTKTLVKNCIVAVDAAPFKRWYAKHYGIDLDADK--KSTK 129
Query: 457 AEEAIINKKRXQKTA 501
A A+ +K+ +K+A
Sbjct: 130 A--AVAAEKKGRKSA 142
Score = 47.6 bits (108), Expect = 4e-04
Identities = 20/35 (57%), Positives = 27/35 (77%)
Frame = +2
Query: 569 GXLLACVASXPGQCGRADGYILQGXELQFYLRXIK 673
G +LA + S PGQ GRADG +L+G ELQFYL+ ++
Sbjct: 182 GRVLARITSRPGQSGRADGILLEGAELQFYLKRLE 216
>UniRef50_Q6QP50 Cluster: Putative 40S ribosomal protein S8; n=1;
Zea mays|Rep: Putative 40S ribosomal protein S8 - Zea
mays (Maize)
Length = 245
Score = 86.6 bits (205), Expect = 7e-16
Identities = 40/52 (76%), Positives = 46/52 (88%)
Frame = +3
Query: 201 RSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVQ 356
R RGGNTK+RALR DT N+SWGSE TRKTRI+DVVY A+NNELVRT+TLV+
Sbjct: 145 RVRGGNTKWRALRFDTCNYSWGSEALTRKTRILDVVYIATNNELVRTQTLVK 196
Score = 47.6 bits (108), Expect = 4e-04
Identities = 19/39 (48%), Positives = 28/39 (71%)
Frame = +1
Query: 349 LFKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEE 465
L K+AIV VDA PF+QWY +HY + +GRKK + + ++
Sbjct: 194 LVKSAIVQVDAAPFKQWYLTHYGVDIGRKKKVSVAKKDD 232
>UniRef50_Q7R1W8 Cluster: Ribosomal protein S8; n=1; Giardia lamblia
ATCC 50803|Rep: Ribosomal protein S8 - Giardia lamblia
ATCC 50803
Length = 174
Score = 72.1 bits (169), Expect = 2e-11
Identities = 33/54 (61%), Positives = 41/54 (75%)
Frame = +3
Query: 201 RSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVQEC 362
R RGGN K RALRL G+F+WGS + K RI+ VVYN+++NELVRT TLV+ C
Sbjct: 56 RCRGGNIKRRALRLSHGSFAWGSADISHKARILQVVYNSTSNELVRTNTLVKGC 109
Score = 43.2 bits (97), Expect = 0.009
Identities = 20/38 (52%), Positives = 24/38 (63%)
Frame = +2
Query: 62 MGISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTRL 175
MGI+ D +KR TG + KKRKY LGR ANT+L
Sbjct: 1 MGITHDKMYKRSKTGAVQGKWHKKRKYNLGRQPANTKL 38
Score = 42.3 bits (95), Expect = 0.015
Identities = 18/32 (56%), Positives = 24/32 (75%)
Frame = +2
Query: 575 LLACVASXPGQCGRADGYILQGXELQFYLRXI 670
+LA ++S PGQ G ADGYIL+G EL FY + +
Sbjct: 140 ILARISSRPGQVGTADGYILEGPELLFYQKKL 171
>UniRef50_UPI000049933B Cluster: conserved hypothetical protein;
n=3; Entamoeba histolytica HM-1:IMSS|Rep: conserved
hypothetical protein - Entamoeba histolytica HM-1:IMSS
Length = 237
Score = 66.9 bits (156), Expect = 6e-10
Identities = 31/52 (59%), Positives = 40/52 (76%)
Frame = +3
Query: 201 RSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVQ 356
R R G K RALRL+ GNFSW S+ T+ T+I++VVYNAS+N+ VRT TLV+
Sbjct: 47 RCRYGIIKRRALRLENGNFSWASQSITKGTKILNVVYNASDNDFVRTNTLVK 98
Score = 60.5 bits (140), Expect = 5e-08
Identities = 27/44 (61%), Positives = 34/44 (77%)
Frame = +2
Query: 62 MGISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTRLGPQRIH 193
MGI+RD HKRRATGGK+ ++KK+K +GR ANTRLG R+H
Sbjct: 1 MGITRDSRHKRRATGGKKNSMQKKKKNTMGRQPANTRLGAIRVH 44
Score = 47.2 bits (107), Expect = 5e-04
Identities = 19/34 (55%), Positives = 25/34 (73%)
Frame = +2
Query: 569 GXLLACVASXPGQCGRADGYILQGXELQFYLRXI 670
G +LAC++S PGQ G +GYIL+G EL FY + I
Sbjct: 199 GRVLACISSRPGQTGSVEGYILEGKELDFYSKKI 232
>UniRef50_A6RAQ0 Cluster: Ribosomal protein S8; n=1; Ajellomyces
capsulatus NAm1|Rep: Ribosomal protein S8 - Ajellomyces
capsulatus NAm1
Length = 141
Score = 65.7 bits (153), Expect = 1e-09
Identities = 30/44 (68%), Positives = 34/44 (77%)
Frame = +2
Query: 62 MGISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTRLGPQRIH 193
MGISRD HKR ATG KR+ RKKR +E GR ANTR+GP+RIH
Sbjct: 1 MGISRDSRHKRSATGAKRSHYRKKRAFEKGRQPANTRIGPKRIH 44
Score = 53.6 bits (123), Expect = 6e-06
Identities = 23/35 (65%), Positives = 28/35 (80%)
Frame = +3
Query: 201 RSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDV 305
R+RGGN K+R LRL++GNFSWGSE RK R+I V
Sbjct: 47 RTRGGNQKFRGLRLESGNFSWGSEGIARKVRVIVV 81
Score = 48.4 bits (110), Expect = 2e-04
Identities = 22/35 (62%), Positives = 25/35 (71%)
Frame = +2
Query: 569 GXLLACVASXPGQCGRADGYILQGXELQFYLRXIK 673
G L A V+S PGQ GR DGYIL+G EL FY R I+
Sbjct: 106 GRLYAVVSSRPGQSGRVDGYILEGEELAFYQRAIR 140
>UniRef50_Q8SWC9 Cluster: Ribosomal protein S8; n=1; Encephalitozoon
cuniculi|Rep: Ribosomal protein S8 - Encephalitozoon
cuniculi
Length = 173
Score = 62.9 bits (146), Expect = 1e-08
Identities = 29/55 (52%), Positives = 39/55 (70%)
Frame = +3
Query: 192 TPXRSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVQ 356
TP R RGGN KY+ALRLD G+F + + R +++ VVY+ S+NELVRT TL +
Sbjct: 44 TPVRVRGGNRKYKALRLDMGHFKFITTGKFRMAKLLQVVYHPSSNELVRTNTLTK 98
Score = 41.5 bits (93), Expect = 0.026
Identities = 17/31 (54%), Positives = 22/31 (70%)
Frame = +2
Query: 566 RGXLLACVASXPGQCGRADGYILQGXELQFY 658
+G L A + S PGQ G A G++LQG EL+FY
Sbjct: 130 KGHLYAIITSRPGQVGMAQGHVLQGDELKFY 160
Score = 37.1 bits (82), Expect = 0.57
Identities = 17/43 (39%), Positives = 25/43 (58%)
Frame = +2
Query: 62 MGISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTRLGPQRI 190
MGI+ HKRR TG K RKKR G ++T++G +++
Sbjct: 1 MGINHRGDHKRRKTGAKAVISRKKRNNRAGSQPSSTKIGERKV 43
>UniRef50_Q4SV68 Cluster: Chromosome undetermined SCAF13783, whole
genome shotgun sequence; n=2; Coelomata|Rep: Chromosome
undetermined SCAF13783, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 149
Score = 60.9 bits (141), Expect = 4e-08
Identities = 25/32 (78%), Positives = 29/32 (90%)
Frame = +2
Query: 581 ACVASXPGQCGRADGYILQGXELQFYLRXIKS 676
AC+AS PGQCGRADGYIL+G EL+FYLR IK+
Sbjct: 114 ACIASRPGQCGRADGYILEGKELEFYLRKIKA 145
>UniRef50_Q5C1R4 Cluster: SJCHGC03085 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC03085 protein - Schistosoma
japonicum (Blood fluke)
Length = 120
Score = 54.0 bits (124), Expect = 5e-06
Identities = 22/45 (48%), Positives = 31/45 (68%)
Frame = +2
Query: 551 KSNSTRGXLLACVASXPGQCGRADGYILQGXELQFYLRXIKSXXA 685
K G LLAC++S PGQ GRADGY+ +G EL+F+ + +K+ A
Sbjct: 75 KEEFVTGRLLACISSKPGQVGRADGYLFEGKELEFFSKKLKAKKA 119
Score = 49.6 bits (113), Expect = 1e-04
Identities = 34/94 (36%), Positives = 45/94 (47%), Gaps = 9/94 (9%)
Frame = +1
Query: 355 KNAIVVVDATPFRQWYESHYTLPLGR-----KKGAKLT--EAEEAIINKKRXQKTARXYL 513
K+AIV + PFRQW+E+ Y LG KKG +T EE + KKR + + +
Sbjct: 1 KSAIVQIGGAPFRQWFEAPYLKELGPPKVVCKKGPSVTPENPEEDFLLKKRSKSALKKFE 60
Query: 514 ARQRL--AKVXGALXEQFHTGAFAGLRGESPRSV 609
RQ L A V +L E+F TG P V
Sbjct: 61 TRQALPQANVEESLKEEFVTGRLLACISSKPGQV 94
>UniRef50_Q9AW20 Cluster: 40S ribosomal protein S8; n=1; Guillardia
theta|Rep: 40S ribosomal protein S8 - Guillardia theta
(Cryptomonas phi)
Length = 178
Score = 53.6 bits (123), Expect = 6e-06
Identities = 28/52 (53%), Positives = 34/52 (65%)
Frame = +3
Query: 201 RSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVQ 356
R RGG K RAL L GNFS+ S T K +I+ V +N S+NELVRT TL +
Sbjct: 47 RVRGGGVKTRALFLSYGNFSFVSIQRTFKAKILSVAFNESSNELVRTNTLTK 98
Score = 48.0 bits (109), Expect = 3e-04
Identities = 20/35 (57%), Positives = 27/35 (77%)
Frame = +2
Query: 569 GXLLACVASXPGQCGRADGYILQGXELQFYLRXIK 673
G +LA + S PGQ GRADGYIL+G EL ++L+ I+
Sbjct: 142 GKILARICSRPGQSGRADGYILEGQELDYFLKKIQ 176
Score = 45.2 bits (102), Expect = 0.002
Identities = 19/39 (48%), Positives = 29/39 (74%)
Frame = +2
Query: 62 MGISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTRLG 178
MGI+R+ HKR++TGG ++ RKKR + GR +NT++G
Sbjct: 1 MGINREGLHKRKSTGGLKSCWRKKRNHAKGRQPSNTKIG 39
>UniRef50_Q3LVX9 Cluster: Ribosomal protein S8; n=1; Bigelowiella
natans|Rep: Ribosomal protein S8 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 176
Score = 46.4 bits (105), Expect = 0.001
Identities = 19/50 (38%), Positives = 34/50 (68%)
Frame = +3
Query: 201 RSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTL 350
R RGGN K++A+ L G+F W + ++ ++I+ V+YN +N +LV+ + L
Sbjct: 41 RVRGGNFKFKAISLGKGSFQWKTMQLSKNSKILSVLYNQANLKLVQKRNL 90
>UniRef50_Q8TV55 Cluster: 30S ribosomal protein S8e; n=1;
Methanopyrus kandleri|Rep: 30S ribosomal protein S8e -
Methanopyrus kandleri
Length = 133
Score = 40.3 bits (90), Expect = 0.061
Identities = 18/38 (47%), Positives = 24/38 (63%), Gaps = 3/38 (7%)
Frame = +2
Query: 83 WHKR---RATGGKRAPIRKKRKYELGRPAANTRLGPQR 187
WH R + TGG+ P RKKRK+E+G P T +G +R
Sbjct: 4 WHGRSLRKPTGGRIRPHRKKRKFEMGNPPTETLVGEER 41
>UniRef50_Q6L0D3 Cluster: 30S ribosomal protein S8e; n=7;
Archaea|Rep: 30S ribosomal protein S8e - Picrophilus
torridus
Length = 125
Score = 36.7 bits (81), Expect = 0.75
Identities = 16/33 (48%), Positives = 21/33 (63%)
Frame = +2
Query: 92 RRATGGKRAPIRKKRKYELGRPAANTRLGPQRI 190
R+ +GGK P KR+YELGR TRLG + +
Sbjct: 10 RKPSGGKLRPNHSKRRYELGREPTLTRLGDREL 42
>UniRef50_A3CSQ2 Cluster: 30S ribosomal protein S8e; n=5;
Archaea|Rep: 30S ribosomal protein S8e - Methanoculleus
marisnigri (strain ATCC 35101 / DSM 1498 / JR1)
Length = 125
Score = 36.7 bits (81), Expect = 0.75
Identities = 21/52 (40%), Positives = 30/52 (57%)
Frame = +3
Query: 201 RSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVQ 356
R+ GGN K RALRL+ S + T+KT+I V N+++ VR K L +
Sbjct: 45 RTFGGNQKVRALRLEYATVSNPATGETKKTKIEAVEANSADPNYVRRKLLTK 96
>UniRef50_A5E7M6 Cluster: Putative uncharacterized protein; n=1;
Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
uncharacterized protein - Lodderomyces elongisporus
(Yeast) (Saccharomyces elongisporus)
Length = 620
Score = 34.7 bits (76), Expect = 3.0
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = +1
Query: 295 SLMLCIMHLTMNWCVQRPLFKNAIVVVD-ATPFRQWYESHYTLPLGRKKGAKLTEAE 462
S + + + W ++ P + D ATPF Q + +HY L RKKG K+ E E
Sbjct: 345 STQVSLQKILYLWAIRHPASGYVQGINDLATPFYQTFLAHYIWQLKRKKGKKMKEDE 401
>UniRef50_Q9HJD0 Cluster: 30S ribosomal protein S8e; n=5;
Euryarchaeota|Rep: 30S ribosomal protein S8e -
Thermoplasma acidophilum
Length = 127
Score = 34.7 bits (76), Expect = 3.0
Identities = 15/29 (51%), Positives = 20/29 (68%)
Frame = +2
Query: 92 RRATGGKRAPIRKKRKYELGRPAANTRLG 178
++ATGG RKKR++ELGR T+LG
Sbjct: 10 KKATGGSLKQSRKKRRFELGREPTLTKLG 38
>UniRef50_UPI0000DB7956 Cluster: PREDICTED: similar to Deformed
CG2189-PA; n=1; Apis mellifera|Rep: PREDICTED: similar
to Deformed CG2189-PA - Apis mellifera
Length = 284
Score = 34.3 bits (75), Expect = 4.0
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +3
Query: 78 ITGISEGPPVGNVRPYARRGSMS*GVPLQTPGSVLSVSTP 197
+TG+ EGPP G + GS+S P +P + L VS P
Sbjct: 230 VTGMMEGPPGGGPLGHIASGSISPLAPATSPSATLQVSAP 269
>UniRef50_UPI0000F32D0C Cluster: Zinc finger CCCH domain-containing
protein 6.; n=1; Bos taurus|Rep: Zinc finger CCCH
domain-containing protein 6. - Bos Taurus
Length = 770
Score = 34.3 bits (75), Expect = 4.0
Identities = 20/37 (54%), Positives = 23/37 (62%)
Frame = +3
Query: 75 GITGISEGPPVGNVRPYARRGSMS*GVPLQTPGSVLS 185
G S GP G + PYA + S S G+PL TPGSVLS
Sbjct: 595 GAVPSSSGP--GALPPYAPKLSSSTGLPLGTPGSVLS 629
>UniRef50_O58830 Cluster: 30S ribosomal protein S8e; n=6;
Archaea|Rep: 30S ribosomal protein S8e - Pyrococcus
horikoshii
Length = 127
Score = 33.9 bits (74), Expect = 5.3
Identities = 15/31 (48%), Positives = 21/31 (67%)
Frame = +2
Query: 92 RRATGGKRAPIRKKRKYELGRPAANTRLGPQ 184
++ +GG+ RKKRK ELGR +NTR+ Q
Sbjct: 10 KKPSGGRIVLARKKRKRELGREPSNTRVAEQ 40
>UniRef50_Q980W3 Cluster: 30S ribosomal protein S8e; n=4;
Archaea|Rep: 30S ribosomal protein S8e - Sulfolobus
solfataricus
Length = 133
Score = 33.1 bits (72), Expect = 9.2
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = +2
Query: 92 RRATGGKRAPIRKKRKYELGRPAANTRLGPQRI 190
R+ TGG + R KRKYE+G P T L + I
Sbjct: 10 RKITGGLKGKHRDKRKYEIGNPPTFTTLSAEDI 42
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 720,736,907
Number of Sequences: 1657284
Number of extensions: 13471177
Number of successful extensions: 35845
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 33788
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35807
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 75833093035
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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