Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP03_F_A15
(858 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X67247-1|CAA47670.1| 208|Homo sapiens ribosomal protein S8 prot... 106 1e-22
BC070875-1|AAH70875.1| 208|Homo sapiens ribosomal protein S8 pr... 106 1e-22
AL592166-7|CAI13003.1| 208|Homo sapiens ribosomal protein S8 pr... 106 1e-22
AB062401-1|BAB93488.1| 208|Homo sapiens ribosomal protein S8 pr... 106 1e-22
AL592166-8|CAI13002.1| 188|Homo sapiens ribosomal protein S8 pr... 100 6e-21
BC005678-1|AAH05678.1| 80|Homo sapiens Similar to ribosomal pr... 67 9e-11
AL606804-1|CAI17145.1| 317|Homo sapiens olfactory receptor, fam... 30 9.4
>X67247-1|CAA47670.1| 208|Homo sapiens ribosomal protein S8
protein.
Length = 208
Score = 106 bits (254), Expect = 1e-22
Identities = 55/86 (63%), Positives = 60/86 (69%), Gaps = 1/86 (1%)
Frame = +3
Query: 108 GNVRPYARRGSMS*GVPL-QTPGSVLSVSTPXRSRGGNTKYRALRLDTGNFSWGSECSTR 284
G +PY ++ G P T + T R RGGN KYRALRLD GNFSWGSEC TR
Sbjct: 16 GKRKPYHKKRKYELGRPAANTKIGPRRIHT-VRVRGGNKKYRALRLDVGNFSWGSECCTR 74
Query: 285 KTRIIDVVYNASNNELVRTKTLVQEC 362
KTRIIDVVYNASNNELVRTKTLV+ C
Sbjct: 75 KTRIIDVVYNASNNELVRTKTLVKNC 100
Score = 100 bits (240), Expect = 6e-21
Identities = 45/76 (59%), Positives = 56/76 (73%)
Frame = +1
Query: 343 RPLFKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEEAIINKKRXQKTARXYLARQ 522
+ L KN IV++D+TP+RQWYESHY LPLGRKKGAKLT EE I+NKKR +K + Y R+
Sbjct: 94 KTLVKNCIVLIDSTPYRQWYESHYALPLGRKKGAKLTPEEEEILNKKRSKKIQKKYDERK 153
Query: 523 RLAKVXGALXEQFHTG 570
+ AK+ L EQF G
Sbjct: 154 KNAKISSLLEEQFQQG 169
Score = 86.6 bits (205), Expect = 1e-16
Identities = 36/45 (80%), Positives = 41/45 (91%)
Frame = +2
Query: 62 MGISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHS 196
MGISRD+WHKRR TGGKR P KKRKYELGRPAANT++GP+RIH+
Sbjct: 1 MGISRDNWHKRRKTGGKRKPYHKKRKYELGRPAANTKIGPRRIHT 45
Score = 66.9 bits (156), Expect = 9e-11
Identities = 28/48 (58%), Positives = 37/48 (77%)
Frame = +2
Query: 533 RLXVLXKSNSTRGXLLACVASXPGQCGRADGYILQGXELQFYLRXIKS 676
++ L + +G LLAC+AS PGQCGRADGY+L+G EL+FYLR IK+
Sbjct: 157 KISSLLEEQFQQGKLLACIASRPGQCGRADGYVLEGKELEFYLRKIKA 204
>BC070875-1|AAH70875.1| 208|Homo sapiens ribosomal protein S8
protein.
Length = 208
Score = 106 bits (254), Expect = 1e-22
Identities = 55/86 (63%), Positives = 60/86 (69%), Gaps = 1/86 (1%)
Frame = +3
Query: 108 GNVRPYARRGSMS*GVPL-QTPGSVLSVSTPXRSRGGNTKYRALRLDTGNFSWGSECSTR 284
G +PY ++ G P T + T R RGGN KYRALRLD GNFSWGSEC TR
Sbjct: 16 GKRKPYHKKRKYELGRPAANTKIGPRRIHT-VRVRGGNKKYRALRLDVGNFSWGSECCTR 74
Query: 285 KTRIIDVVYNASNNELVRTKTLVQEC 362
KTRIIDVVYNASNNELVRTKTLV+ C
Sbjct: 75 KTRIIDVVYNASNNELVRTKTLVKNC 100
Score = 100 bits (240), Expect = 6e-21
Identities = 45/76 (59%), Positives = 56/76 (73%)
Frame = +1
Query: 343 RPLFKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEEAIINKKRXQKTARXYLARQ 522
+ L KN IV++D+TP+RQWYESHY LPLGRKKGAKLT EE I+NKKR +K + Y R+
Sbjct: 94 KTLVKNCIVLIDSTPYRQWYESHYALPLGRKKGAKLTPEEEEILNKKRSKKIQKKYDERK 153
Query: 523 RLAKVXGALXEQFHTG 570
+ AK+ L EQF G
Sbjct: 154 KNAKISSLLEEQFQQG 169
Score = 86.6 bits (205), Expect = 1e-16
Identities = 36/45 (80%), Positives = 41/45 (91%)
Frame = +2
Query: 62 MGISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHS 196
MGISRD+WHKRR TGGKR P KKRKYELGRPAANT++GP+RIH+
Sbjct: 1 MGISRDNWHKRRKTGGKRKPYHKKRKYELGRPAANTKIGPRRIHT 45
Score = 66.9 bits (156), Expect = 9e-11
Identities = 28/48 (58%), Positives = 37/48 (77%)
Frame = +2
Query: 533 RLXVLXKSNSTRGXLLACVASXPGQCGRADGYILQGXELQFYLRXIKS 676
++ L + +G LLAC+AS PGQCGRADGY+L+G EL+FYLR IK+
Sbjct: 157 KISSLLEEQFQQGKLLACIASRPGQCGRADGYVLEGKELEFYLRKIKA 204
>AL592166-7|CAI13003.1| 208|Homo sapiens ribosomal protein S8
protein.
Length = 208
Score = 106 bits (254), Expect = 1e-22
Identities = 55/86 (63%), Positives = 60/86 (69%), Gaps = 1/86 (1%)
Frame = +3
Query: 108 GNVRPYARRGSMS*GVPL-QTPGSVLSVSTPXRSRGGNTKYRALRLDTGNFSWGSECSTR 284
G +PY ++ G P T + T R RGGN KYRALRLD GNFSWGSEC TR
Sbjct: 16 GKRKPYHKKRKYELGRPAANTKIGPRRIHT-VRVRGGNKKYRALRLDVGNFSWGSECCTR 74
Query: 285 KTRIIDVVYNASNNELVRTKTLVQEC 362
KTRIIDVVYNASNNELVRTKTLV+ C
Sbjct: 75 KTRIIDVVYNASNNELVRTKTLVKNC 100
Score = 100 bits (240), Expect = 6e-21
Identities = 45/76 (59%), Positives = 56/76 (73%)
Frame = +1
Query: 343 RPLFKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEEAIINKKRXQKTARXYLARQ 522
+ L KN IV++D+TP+RQWYESHY LPLGRKKGAKLT EE I+NKKR +K + Y R+
Sbjct: 94 KTLVKNCIVLIDSTPYRQWYESHYALPLGRKKGAKLTPEEEEILNKKRSKKIQKKYDERK 153
Query: 523 RLAKVXGALXEQFHTG 570
+ AK+ L EQF G
Sbjct: 154 KNAKISSLLEEQFQQG 169
Score = 86.6 bits (205), Expect = 1e-16
Identities = 36/45 (80%), Positives = 41/45 (91%)
Frame = +2
Query: 62 MGISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHS 196
MGISRD+WHKRR TGGKR P KKRKYELGRPAANT++GP+RIH+
Sbjct: 1 MGISRDNWHKRRKTGGKRKPYHKKRKYELGRPAANTKIGPRRIHT 45
Score = 66.9 bits (156), Expect = 9e-11
Identities = 28/48 (58%), Positives = 37/48 (77%)
Frame = +2
Query: 533 RLXVLXKSNSTRGXLLACVASXPGQCGRADGYILQGXELQFYLRXIKS 676
++ L + +G LLAC+AS PGQCGRADGY+L+G EL+FYLR IK+
Sbjct: 157 KISSLLEEQFQQGKLLACIASRPGQCGRADGYVLEGKELEFYLRKIKA 204
>AB062401-1|BAB93488.1| 208|Homo sapiens ribosomal protein S8
protein.
Length = 208
Score = 106 bits (254), Expect = 1e-22
Identities = 55/86 (63%), Positives = 60/86 (69%), Gaps = 1/86 (1%)
Frame = +3
Query: 108 GNVRPYARRGSMS*GVPL-QTPGSVLSVSTPXRSRGGNTKYRALRLDTGNFSWGSECSTR 284
G +PY ++ G P T + T R RGGN KYRALRLD GNFSWGSEC TR
Sbjct: 16 GKRKPYHKKRKYELGRPAANTKIGPRRIHT-VRVRGGNKKYRALRLDVGNFSWGSECCTR 74
Query: 285 KTRIIDVVYNASNNELVRTKTLVQEC 362
KTRIIDVVYNASNNELVRTKTLV+ C
Sbjct: 75 KTRIIDVVYNASNNELVRTKTLVKNC 100
Score = 100 bits (240), Expect = 6e-21
Identities = 45/76 (59%), Positives = 56/76 (73%)
Frame = +1
Query: 343 RPLFKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEEAIINKKRXQKTARXYLARQ 522
+ L KN IV++D+TP+RQWYESHY LPLGRKKGAKLT EE I+NKKR +K + Y R+
Sbjct: 94 KTLVKNCIVLIDSTPYRQWYESHYALPLGRKKGAKLTPEEEEILNKKRSKKIQKKYDERK 153
Query: 523 RLAKVXGALXEQFHTG 570
+ AK+ L EQF G
Sbjct: 154 KNAKISSLLEEQFQQG 169
Score = 86.6 bits (205), Expect = 1e-16
Identities = 36/45 (80%), Positives = 41/45 (91%)
Frame = +2
Query: 62 MGISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHS 196
MGISRD+WHKRR TGGKR P KKRKYELGRPAANT++GP+RIH+
Sbjct: 1 MGISRDNWHKRRKTGGKRKPYHKKRKYELGRPAANTKIGPRRIHT 45
Score = 66.9 bits (156), Expect = 9e-11
Identities = 28/48 (58%), Positives = 37/48 (77%)
Frame = +2
Query: 533 RLXVLXKSNSTRGXLLACVASXPGQCGRADGYILQGXELQFYLRXIKS 676
++ L + +G LLAC+AS PGQCGRADGY+L+G EL+FYLR IK+
Sbjct: 157 KISSLLEEQFQQGKLLACIASRPGQCGRADGYVLEGKELEFYLRKIKA 204
>AL592166-8|CAI13002.1| 188|Homo sapiens ribosomal protein S8
protein.
Length = 188
Score = 100 bits (240), Expect = 6e-21
Identities = 45/76 (59%), Positives = 56/76 (73%)
Frame = +1
Query: 343 RPLFKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEEAIINKKRXQKTARXYLARQ 522
+ L KN IV++D+TP+RQWYESHY LPLGRKKGAKLT EE I+NKKR +K + Y R+
Sbjct: 74 KTLVKNCIVLIDSTPYRQWYESHYALPLGRKKGAKLTPEEEEILNKKRSKKIQKKYDERK 133
Query: 523 RLAKVXGALXEQFHTG 570
+ AK+ L EQF G
Sbjct: 134 KNAKISSLLEEQFQQG 149
Score = 86.6 bits (205), Expect = 1e-16
Identities = 36/45 (80%), Positives = 41/45 (91%)
Frame = +2
Query: 62 MGISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHS 196
MGISRD+WHKRR TGGKR P KKRKYELGRPAANT++GP+RIH+
Sbjct: 1 MGISRDNWHKRRKTGGKRKPYHKKRKYELGRPAANTKIGPRRIHT 45
Score = 66.9 bits (156), Expect = 9e-11
Identities = 28/48 (58%), Positives = 37/48 (77%)
Frame = +2
Query: 533 RLXVLXKSNSTRGXLLACVASXPGQCGRADGYILQGXELQFYLRXIKS 676
++ L + +G LLAC+AS PGQCGRADGY+L+G EL+FYLR IK+
Sbjct: 137 KISSLLEEQFQQGKLLACIASRPGQCGRADGYVLEGKELEFYLRKIKA 184
Score = 58.8 bits (136), Expect = 2e-08
Identities = 33/49 (67%), Positives = 35/49 (71%)
Frame = +3
Query: 216 NTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVQEC 362
NTK R+ T G C TRKTRIIDVVYNASNNELVRTKTLV+ C
Sbjct: 35 NTKIGPRRIHTVRVRGG--C-TRKTRIIDVVYNASNNELVRTKTLVKNC 80
>BC005678-1|AAH05678.1| 80|Homo sapiens Similar to ribosomal
protein S8 protein.
Length = 80
Score = 66.9 bits (156), Expect = 9e-11
Identities = 28/48 (58%), Positives = 37/48 (77%)
Frame = +2
Query: 533 RLXVLXKSNSTRGXLLACVASXPGQCGRADGYILQGXELQFYLRXIKS 676
++ L + +G LLAC+AS PGQCGRADGY+L+G EL+FYLR IK+
Sbjct: 29 KISSLLEEQFQQGKLLACIASRPGQCGRADGYVLEGKELEFYLRKIKA 76
Score = 39.5 bits (88), Expect = 0.015
Identities = 19/41 (46%), Positives = 25/41 (60%)
Frame = +1
Query: 448 LTEAEEAIINKKRXQKTARXYLARQRLAKVXGALXEQFHTG 570
LT EE I+NKKR +K + Y R++ AK+ L EQF G
Sbjct: 1 LTPEEEEILNKKRSKKIQKKYDERKKNAKISSLLEEQFQQG 41
>AL606804-1|CAI17145.1| 317|Homo sapiens olfactory receptor, family
2, subfamily B, memberd protein 1 protein.
Length = 317
Score = 30.3 bits (65), Expect = 9.4
Identities = 16/51 (31%), Positives = 25/51 (49%)
Frame = -3
Query: 367 QLHS*TRVFVRTNSLLDALYTTSMIRVLRVEHSDPQEKLPVSRRSARYLVF 215
QLHS +F+ S LD YTT+ + + V Q+ + + +Y VF
Sbjct: 58 QLHSPMYIFLSHLSFLDLCYTTTTVPQMLVNMGSSQKTISYGGCTVQYAVF 108
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,335,803
Number of Sequences: 237096
Number of extensions: 2259886
Number of successful extensions: 4837
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 4421
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4834
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10928473528
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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