Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP03_F_A13
(1026 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax pr... 25 0.94
AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax pr... 25 0.94
AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax pr... 25 0.94
AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax pr... 25 0.94
AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax pr... 25 0.94
AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. 25 0.94
AF261823-1|AAG13010.1| 157|Tribolium castaneum cephalothorax pr... 25 0.94
AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduce... 25 0.94
DQ342040-1|ABC69932.1| 822|Tribolium castaneum STIP protein. 24 2.2
AF219117-1|AAF71999.1| 406|Tribolium castaneum tailless ortholo... 23 5.0
AY887136-1|AAW78361.1| 580|Tribolium castaneum vasa RNA helicas... 22 8.8
>AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 25.0 bits (52), Expect = 0.94
Identities = 10/27 (37%), Positives = 11/27 (40%)
Frame = +2
Query: 152 PPPXWXPPXXPPPPPXXPXXXPXPXGG 232
PP + PP P P P P P G
Sbjct: 39 PPACYSPPQVAPQYPQHPYAAPAPGHG 65
>AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 25.0 bits (52), Expect = 0.94
Identities = 10/27 (37%), Positives = 11/27 (40%)
Frame = +2
Query: 152 PPPXWXPPXXPPPPPXXPXXXPXPXGG 232
PP + PP P P P P P G
Sbjct: 39 PPACYSPPQVAPQYPQHPYAAPAPGHG 65
>AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax
protein.
Length = 230
Score = 25.0 bits (52), Expect = 0.94
Identities = 10/27 (37%), Positives = 11/27 (40%)
Frame = +2
Query: 152 PPPXWXPPXXPPPPPXXPXXXPXPXGG 232
PP + PP P P P P P G
Sbjct: 39 PPACYSPPQVAPQYPQHPYAAPAPGHG 65
>AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 25.0 bits (52), Expect = 0.94
Identities = 10/27 (37%), Positives = 11/27 (40%)
Frame = +2
Query: 152 PPPXWXPPXXPPPPPXXPXXXPXPXGG 232
PP + PP P P P P P G
Sbjct: 39 PPACYSPPQVAPQYPQHPYAAPAPGHG 65
>AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax
protein.
Length = 297
Score = 25.0 bits (52), Expect = 0.94
Identities = 10/27 (37%), Positives = 11/27 (40%)
Frame = +2
Query: 152 PPPXWXPPXXPPPPPXXPXXXPXPXGG 232
PP + PP P P P P P G
Sbjct: 39 PPACYSPPQVAPQYPQHPYAAPAPGHG 65
>AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein.
Length = 312
Score = 25.0 bits (52), Expect = 0.94
Identities = 10/27 (37%), Positives = 11/27 (40%)
Frame = +2
Query: 152 PPPXWXPPXXPPPPPXXPXXXPXPXGG 232
PP + PP P P P P P G
Sbjct: 39 PPACYSPPQVAPQYPQHPYAAPAPGHG 65
>AF261823-1|AAG13010.1| 157|Tribolium castaneum cephalothorax
protein.
Length = 157
Score = 25.0 bits (52), Expect = 0.94
Identities = 10/27 (37%), Positives = 11/27 (40%)
Frame = +2
Query: 152 PPPXWXPPXXPPPPPXXPXXXPXPXGG 232
PP + PP P P P P P G
Sbjct: 39 PPACYSPPQVAPQYPQHPYAAPAPGHG 65
>AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduced
Scr protein.
Length = 312
Score = 25.0 bits (52), Expect = 0.94
Identities = 10/27 (37%), Positives = 11/27 (40%)
Frame = +2
Query: 152 PPPXWXPPXXPPPPPXXPXXXPXPXGG 232
PP + PP P P P P P G
Sbjct: 39 PPACYSPPQVAPQYPQHPYAAPAPGHG 65
>DQ342040-1|ABC69932.1| 822|Tribolium castaneum STIP protein.
Length = 822
Score = 23.8 bits (49), Expect = 2.2
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -3
Query: 430 PPPPPPP 410
PPPPPPP
Sbjct: 731 PPPPPPP 737
Score = 23.8 bits (49), Expect = 2.2
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -1
Query: 429 PPPPPPP 409
PPPPPPP
Sbjct: 731 PPPPPPP 737
Score = 23.8 bits (49), Expect = 2.2
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +3
Query: 834 PPPPPPP 854
PPPPPPP
Sbjct: 731 PPPPPPP 737
Score = 23.8 bits (49), Expect = 2.2
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +1
Query: 835 PPPPPPP 855
PPPPPPP
Sbjct: 731 PPPPPPP 737
>AF219117-1|AAF71999.1| 406|Tribolium castaneum tailless ortholog
protein.
Length = 406
Score = 22.6 bits (46), Expect = 5.0
Identities = 10/27 (37%), Positives = 10/27 (37%)
Frame = -3
Query: 733 GPPPPPXGXXXXGXPXGPGXPXAPXAP 653
GP PP G P P P P P
Sbjct: 161 GPALPPTGFLCNNYPPLPQVPPLPLPP 187
Score = 22.6 bits (46), Expect = 5.0
Identities = 8/16 (50%), Positives = 8/16 (50%)
Frame = +2
Query: 896 PPXPPXXPXPXPPPXP 943
PP P P P PP P
Sbjct: 175 PPLPQVPPLPLPPIFP 190
Score = 22.2 bits (45), Expect = 6.6
Identities = 11/36 (30%), Positives = 11/36 (30%)
Frame = +3
Query: 813 PLXXXPXPPPPPPPXXXXXXRAXPXXXPPPXPPXXP 920
P P P PP P P P PP P
Sbjct: 155 PSIIDPGPALPPTGFLCNNYPPLPQVPPLPLPPIFP 190
>AY887136-1|AAW78361.1| 580|Tribolium castaneum vasa RNA helicase
protein.
Length = 580
Score = 21.8 bits (44), Expect = 8.8
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = -3
Query: 544 GGXGGGGGXXXXGXGGG 494
GG GGG G GGG
Sbjct: 92 GGGRGGGRDGDRGDGGG 108
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.310 0.152 0.543
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 182,988
Number of Sequences: 336
Number of extensions: 5151
Number of successful extensions: 19
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 122,585
effective HSP length: 58
effective length of database: 103,097
effective search space used: 29176451
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 43 (21.9 bits)
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