Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP03_F_A13
(1026 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 27 0.36
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 26 0.47
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 25 1.5
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 24 2.5
DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related pro... 22 7.8
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 26.6 bits (56), Expect = 0.36
Identities = 10/23 (43%), Positives = 11/23 (47%)
Frame = +3
Query: 783 RPXAGGXGXXPLXXXPXPPPPPP 851
R G P+ P PPPPPP
Sbjct: 1842 RRSVGSARNIPVSGSPEPPPPPP 1864
Score = 26.2 bits (55), Expect = 0.48
Identities = 10/22 (45%), Positives = 11/22 (50%)
Frame = +1
Query: 787 RARGGXGXXPXXXPPXPPPPPP 852
R+ G P P PPPPPP
Sbjct: 1843 RSVGSARNIPVSGSPEPPPPPP 1864
Score = 23.0 bits (47), Expect = 4.5
Identities = 9/19 (47%), Positives = 9/19 (47%)
Frame = -1
Query: 468 GXXRAPXXXGGXXPPPPPP 412
G R G PPPPPP
Sbjct: 1846 GSARNIPVSGSPEPPPPPP 1864
Score = 22.2 bits (45), Expect = 7.8
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = -1
Query: 438 GXXPPPPPPP 409
G PPPPPP
Sbjct: 1855 GSPEPPPPPP 1864
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 25.8 bits (54), Expect = 0.63
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +1
Query: 826 PPXPPPPPPP 855
PP P PPPPP
Sbjct: 338 PPKPAPPPPP 347
Score = 23.8 bits (49), Expect = 2.5
Identities = 8/15 (53%), Positives = 8/15 (53%)
Frame = +2
Query: 881 PPPXPPPXPPXXPXP 925
P P PPP PP P
Sbjct: 339 PKPAPPPPPPSSSGP 353
Score = 23.4 bits (48), Expect = 3.4
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +3
Query: 828 PXPPPPPP 851
P PPPPPP
Sbjct: 341 PAPPPPPP 348
Score = 23.4 bits (48), Expect = 3.4
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +1
Query: 829 PXPPPPPP 852
P PPPPPP
Sbjct: 341 PAPPPPPP 348
Score = 23.0 bits (47), Expect(2) = 0.47
Identities = 8/15 (53%), Positives = 8/15 (53%)
Frame = +3
Query: 459 GXPXTPXXXGPPPPP 503
G TP PPPPP
Sbjct: 333 GDSDTPPKPAPPPPP 347
Score = 21.4 bits (43), Expect(2) = 0.47
Identities = 7/13 (53%), Positives = 7/13 (53%)
Frame = +3
Query: 522 PPPPPXPPXXPXP 560
P PPP PP P
Sbjct: 341 PAPPPPPPSSSGP 353
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 24.6 bits (51), Expect = 1.5
Identities = 12/41 (29%), Positives = 12/41 (29%)
Frame = +3
Query: 813 PLXXXPXPPPPPPPXXXXXXRAXPXXXPPPXPPXXPXXXPP 935
P P P P P R P PP P PP
Sbjct: 16 PSSGAPGPQPSPHQSPQAPQRGSPPNPSQGPPPGGPPGAPP 56
Score = 24.2 bits (50), Expect = 1.9
Identities = 9/22 (40%), Positives = 10/22 (45%)
Frame = +2
Query: 872 PRXPPPXPPPXPPXXPXPXPPP 937
P+ P PP P P P PP
Sbjct: 31 PQAPQRGSPPNPSQGPPPGGPP 52
Score = 23.4 bits (48), Expect = 3.4
Identities = 9/21 (42%), Positives = 9/21 (42%)
Frame = +2
Query: 875 RXPPPXPPPXPPXXPXPXPPP 937
R PP P PP P PP
Sbjct: 36 RGSPPNPSQGPPPGGPPGAPP 56
Score = 22.6 bits (46), Expect = 5.9
Identities = 11/35 (31%), Positives = 12/35 (34%)
Frame = +3
Query: 840 PPPPPXXXXXXRAXPXXXPPPXPPXXPXXXPPRAP 944
P P P +A PP P PP AP
Sbjct: 21 PGPQPSPHQSPQAPQRGSPPNPSQGPPPGGPPGAP 55
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 23.8 bits (49), Expect = 2.5
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -3
Query: 430 PPPPPPP 410
PPPPPPP
Sbjct: 1355 PPPPPPP 1361
Score = 23.8 bits (49), Expect = 2.5
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -1
Query: 429 PPPPPPP 409
PPPPPPP
Sbjct: 1355 PPPPPPP 1361
Score = 23.8 bits (49), Expect = 2.5
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +3
Query: 834 PPPPPPP 854
PPPPPPP
Sbjct: 1355 PPPPPPP 1361
Score = 23.8 bits (49), Expect = 2.5
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +1
Query: 835 PPPPPPP 855
PPPPPPP
Sbjct: 1355 PPPPPPP 1361
Score = 23.8 bits (49), Expect = 2.5
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -3
Query: 430 PPPPPPP 410
PPPPPPP
Sbjct: 1356 PPPPPPP 1362
Score = 23.8 bits (49), Expect = 2.5
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -1
Query: 429 PPPPPPP 409
PPPPPPP
Sbjct: 1356 PPPPPPP 1362
Score = 23.8 bits (49), Expect = 2.5
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +3
Query: 834 PPPPPPP 854
PPPPPPP
Sbjct: 1356 PPPPPPP 1362
Score = 23.8 bits (49), Expect = 2.5
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +1
Query: 835 PPPPPPP 855
PPPPPPP
Sbjct: 1356 PPPPPPP 1362
Score = 23.4 bits (48), Expect = 3.4
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +3
Query: 522 PPPPPXPP 545
PPPPP PP
Sbjct: 1355 PPPPPPPP 1362
Score = 23.4 bits (48), Expect = 3.4
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +3
Query: 828 PXPPPPPP 851
P PPPPPP
Sbjct: 1355 PPPPPPPP 1362
>DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related
protein STG-1 protein.
Length = 397
Score = 22.2 bits (45), Expect = 7.8
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = -2
Query: 863 GXXGGGGGGGXG 828
G GGGGGG G
Sbjct: 42 GANNGGGGGGLG 53
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.310 0.152 0.543
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 282,357
Number of Sequences: 438
Number of extensions: 13364
Number of successful extensions: 35
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 34225737
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 43 (21.9 bits)
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