Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP03_F_A08
(828 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 43 5e-05
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 37 0.004
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 34 0.028
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 32 0.086
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 32 0.086
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 32 0.086
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 29 0.61
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 26 1.1
SPBC557.04 |ppk29||Ark1/Prk1 family protein kinase Ppk29|Schizos... 27 4.3
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha... 27 4.3
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 27 4.3
SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein Cap1|S... 26 5.7
SPAC26A3.16 |dph1|ucp5|UBA domain protein Dph1|Schizosaccharomyc... 26 7.5
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 25 9.9
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 43.2 bits (97), Expect = 5e-05
Identities = 15/21 (71%), Positives = 15/21 (71%)
Frame = +3
Query: 372 PPPPXPPPPXXGGGXPPPPPP 434
PPPP PPP G G PPPPPP
Sbjct: 761 PPPPPPPPGVAGAGPPPPPPP 781
Score = 39.1 bits (87), Expect = 8e-04
Identities = 14/22 (63%), Positives = 14/22 (63%)
Frame = +3
Query: 369 PPPPPXPPPPXXGGGXPPPPPP 434
PPPPP PP G PPPPPP
Sbjct: 761 PPPPPPPPGVAGAGPPPPPPPP 782
Score = 37.9 bits (84), Expect = 0.002
Identities = 14/22 (63%), Positives = 14/22 (63%)
Frame = +3
Query: 369 PPPPPXPPPPXXGGGXPPPPPP 434
P P P PPP GG PPPPPP
Sbjct: 746 PAPIPVPPPAPIMGGPPPPPPP 767
Score = 33.5 bits (73), Expect = 0.037
Identities = 14/23 (60%), Positives = 14/23 (60%), Gaps = 1/23 (4%)
Frame = +3
Query: 369 PPPPPXP-PPPXXGGGXPPPPPP 434
P P P P PPP G PPPPPP
Sbjct: 744 PAPAPIPVPPPAPIMGGPPPPPP 766
Score = 29.9 bits (64), Expect = 0.46
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +3
Query: 369 PPPPPXPPPPXXGGG 413
PPPPP PPP GG
Sbjct: 775 PPPPPPPPPAVSAGG 789
Score = 28.7 bits (61), Expect = 1.1
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +2
Query: 326 PXPXPPPPXXPXXXPPXPP 382
P P PPPP PP PP
Sbjct: 761 PPPPPPPPGVAGAGPPPPP 779
Score = 28.3 bits (60), Expect = 1.4
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +3
Query: 369 PPPPPXPPPPXXGGGXPPPPPP 434
PPPPP PP GG P P
Sbjct: 776 PPPPPPPPAVSAGGSRYYAPAP 797
Score = 27.5 bits (58), Expect = 2.5
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = +2
Query: 320 PPPXPXPPPPXXPXXXPPXPP 382
P P P PPP PP PP
Sbjct: 746 PAPIPVPPPAPIMGGPPPPPP 766
Score = 27.5 bits (58), Expect = 2.5
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +2
Query: 323 PPXPXPPPPXXPXXXPPXPP 382
PP P PPP PP PP
Sbjct: 761 PPPPPPPPGVAGAGPPPPPP 780
Score = 27.1 bits (57), Expect = 3.2
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = +2
Query: 320 PPPXPXPPPPXXPXXXPPXPP 382
P P P P PP P P PP
Sbjct: 744 PAPAPIPVPPPAPIMGGPPPP 764
Score = 27.1 bits (57), Expect = 3.2
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = +2
Query: 320 PPPXPXPPPPXXPXXXPPXPP 382
PPP P PP PP PP
Sbjct: 761 PPPPPPPPGVAGAGPPPPPPP 781
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 36.7 bits (81), Expect = 0.004
Identities = 13/21 (61%), Positives = 13/21 (61%)
Frame = +3
Query: 372 PPPPXPPPPXXGGGXPPPPPP 434
PPPP PPP PPPPPP
Sbjct: 9 PPPPPPPPGFEPPSQPPPPPP 29
Score = 35.1 bits (77), Expect = 0.012
Identities = 13/22 (59%), Positives = 13/22 (59%)
Frame = +3
Query: 369 PPPPPXPPPPXXGGGXPPPPPP 434
PPPPP PP PPPPPP
Sbjct: 9 PPPPPPPPGFEPPSQPPPPPPP 30
Score = 31.1 bits (67), Expect = 0.20
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +2
Query: 323 PPXPXPPPPXXPXXXPPXPP 382
PP P PPP P PP PP
Sbjct: 9 PPPPPPPPGFEPPSQPPPPP 28
Score = 29.5 bits (63), Expect = 0.61
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +2
Query: 320 PPPXPXPPPPXXPXXXPPXPP 382
PPP P PP P PP PP
Sbjct: 9 PPPPPPPPGFEPPSQPPPPPP 29
Score = 27.9 bits (59), Expect = 1.9
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +2
Query: 323 PPXPXPPPPXXPXXXPPXPP 382
PP PPPP P PP P
Sbjct: 5 PPGNPPPPPPPPGFEPPSQP 24
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 33.9 bits (74), Expect = 0.028
Identities = 14/22 (63%), Positives = 14/22 (63%)
Frame = -3
Query: 433 GGGGGGXPPPXXGGGGXGGGGG 368
GGG GG PP G GG GG GG
Sbjct: 194 GGGSGGPPPGPGGFGGFGGFGG 215
Score = 26.2 bits (55), Expect = 5.7
Identities = 13/22 (59%), Positives = 13/22 (59%), Gaps = 1/22 (4%)
Frame = -3
Query: 430 GGGGGXPPPXXGG-GGXGGGGG 368
GG GG P GG GG GGG G
Sbjct: 224 GGFGGGPGGFEGGPGGFGGGPG 245
Score = 26.2 bits (55), Expect = 5.7
Identities = 13/22 (59%), Positives = 13/22 (59%), Gaps = 1/22 (4%)
Frame = -3
Query: 430 GGGGGXPPPXXGG-GGXGGGGG 368
GG GG P GG GG GGG G
Sbjct: 238 GGFGGGPGGFGGGLGGFGGGPG 259
Score = 25.4 bits (53), Expect = 9.9
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = -3
Query: 433 GGGGGGXPPPXXGGGGXGGGGG 368
G GG G P GGG G GGG
Sbjct: 236 GPGGFGGGPGGFGGGLGGFGGG 257
Score = 25.4 bits (53), Expect = 9.9
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = -3
Query: 433 GGGGGGXPPPXXGGGGXGGGGG 368
GG GGG G GG GGG G
Sbjct: 245 GGFGGGLGGFGGGPGGFGGGPG 266
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 32.3 bits (70), Expect = 0.086
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = +3
Query: 369 PPPPPXPPPPXXGGGXPPPPPP 434
PPPP PP P PPPP P
Sbjct: 1715 PPPPSAPPMPAGPPSAPPPPLP 1736
Score = 28.7 bits (61), Expect = 1.1
Identities = 14/27 (51%), Positives = 14/27 (51%), Gaps = 5/27 (18%)
Frame = +3
Query: 369 PPPPPX--PPP---PXXGGGXPPPPPP 434
PPPPP PPP P G P PPP
Sbjct: 1707 PPPPPMSVPPPPSAPPMPAGPPSAPPP 1733
Score = 27.9 bits (59), Expect = 1.9
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +2
Query: 320 PPPXPXPPPPXXPXXXPPXP 379
PPP PP P P PP P
Sbjct: 1715 PPPPSAPPMPAGPPSAPPPP 1734
Score = 27.1 bits (57), Expect = 3.2
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +2
Query: 320 PPPXPXPPPPXXPXXXPPXPP 382
PPP PPPP P P PP
Sbjct: 1709 PPPMSVPPPPSAP-PMPAGPP 1728
Score = 25.4 bits (53), Expect = 9.9
Identities = 9/20 (45%), Positives = 9/20 (45%)
Frame = +3
Query: 375 PPPXPPPPXXGGGXPPPPPP 434
PP PPPP P P P
Sbjct: 1727 PPSAPPPPLPASSAPSVPNP 1746
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 32.3 bits (70), Expect = 0.086
Identities = 15/30 (50%), Positives = 15/30 (50%), Gaps = 8/30 (26%)
Frame = +3
Query: 369 PPPPPXP--------PPPXXGGGXPPPPPP 434
PPPPP P P P G PPPPPP
Sbjct: 337 PPPPPPPRSNAAGSIPLPPQGRSAPPPPPP 366
Score = 29.5 bits (63), Expect = 0.61
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +3
Query: 369 PPPPPXPPPPXXGGGXPPPPPP 434
P PPP PPP PP PP
Sbjct: 251 PAPPPIPPPSNGTVSSPPNSPP 272
Score = 28.7 bits (61), Expect = 1.1
Identities = 15/32 (46%), Positives = 15/32 (46%), Gaps = 10/32 (31%)
Frame = +3
Query: 369 PPPPPXP------PPPXXGG----GXPPPPPP 434
PPPPP P PP G PPPPPP
Sbjct: 311 PPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPP 342
Score = 26.2 bits (55), Expect = 5.7
Identities = 11/22 (50%), Positives = 11/22 (50%), Gaps = 2/22 (9%)
Frame = +2
Query: 323 PPXPXPP--PPXXPXXXPPXPP 382
PP P PP PP P PP P
Sbjct: 415 PPVPTPPSLPPSAPPSLPPSAP 436
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 32.3 bits (70), Expect = 0.086
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = +3
Query: 369 PPPPPXPPPPXXGGGXPPPPPP 434
PPP PP P G PP PPP
Sbjct: 1192 PPPSEAPPVPKPSVGVPPVPPP 1213
Score = 29.9 bits (64), Expect = 0.46
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +3
Query: 369 PPPPPXPPPPXXGGGXPPPPPP 434
PPP PP P G PP P P
Sbjct: 1211 PPPSTAPPVPTPSAGLPPVPVP 1232
Score = 27.5 bits (58), Expect = 2.5
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = +2
Query: 320 PPPXPXPPPPXXPXXXPPXPP 382
PPP PP P PP PP
Sbjct: 1192 PPPSEAPPVPKPSVGVPPVPP 1212
Score = 27.1 bits (57), Expect = 3.2
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = +3
Query: 372 PPPPXPPPPXXGGGXPPPPPP 434
P PP P G PP PPP
Sbjct: 1174 PSSGIPPVPKPAAGVPPVPPP 1194
Score = 26.6 bits (56), Expect = 4.3
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +3
Query: 369 PPPPPXPPPPXXGGGXPPPPPP 434
P P PP P G P PPP
Sbjct: 1044 PIPTSTPPVPKSSSGAPSAPPP 1065
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 29.5 bits (63), Expect = 0.61
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +3
Query: 369 PPPPPXPPPPXXGGGXPPPP 428
P PPP PP P P PP
Sbjct: 3 PAPPPPPPAPAPAAAAPAPP 22
Score = 25.4 bits (53), Expect = 9.9
Identities = 9/20 (45%), Positives = 9/20 (45%)
Frame = +3
Query: 375 PPPXPPPPXXGGGXPPPPPP 434
P P PPPP P PP
Sbjct: 3 PAPPPPPPAPAPAAAAPAPP 22
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 26.2 bits (55), Expect = 5.7
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +3
Query: 369 PPPPPXPPP 395
PPPPP PPP
Sbjct: 189 PPPPPPPPP 197
Score = 26.2 bits (55), Expect = 5.7
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +3
Query: 372 PPPPXPPPP 398
PPPP PPPP
Sbjct: 189 PPPPPPPPP 197
Score = 23.8 bits (49), Expect(2) = 1.1
Identities = 8/15 (53%), Positives = 8/15 (53%)
Frame = +2
Query: 326 PXPXPPPPXXPXXXP 370
P P PPPP P P
Sbjct: 234 PLPAPPPPPPPTLPP 248
Score = 23.0 bits (47), Expect(2) = 4.0
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +2
Query: 320 PPPXPXPPP 346
PPP P PPP
Sbjct: 189 PPPPPPPPP 197
Score = 23.0 bits (47), Expect(2) = 1.1
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +2
Query: 323 PPXPXPPPP 349
PP P PPPP
Sbjct: 189 PPPPPPPPP 197
Score = 21.8 bits (44), Expect(2) = 4.0
Identities = 7/12 (58%), Positives = 7/12 (58%)
Frame = +2
Query: 323 PPXPXPPPPXXP 358
P P PPPP P
Sbjct: 236 PAPPPPPPPTLP 247
>SPBC557.04 |ppk29||Ark1/Prk1 family protein kinase
Ppk29|Schizosaccharomyces pombe|chr 2|||Manual
Length = 872
Score = 26.6 bits (56), Expect = 4.3
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = +3
Query: 390 PPPXXGGGXPPPPPP 434
P P G PPPPPP
Sbjct: 347 PTPQVQGSRPPPPPP 361
>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 884
Score = 26.6 bits (56), Expect = 4.3
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +3
Query: 372 PPPPXPPPPXXGGGXPPPPP 431
P PP P P PPPPP
Sbjct: 729 PAPPTPAPTPAVKHHPPPPP 748
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 26.6 bits (56), Expect = 4.3
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = +3
Query: 369 PPPPPXPPPPXXGGG 413
PPPPP PPP G
Sbjct: 945 PPPPPPPPPLVSAAG 959
Score = 25.4 bits (53), Expect = 9.9
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = +3
Query: 369 PPPPPXPPPPXXGGG 413
PPPPP PP GG
Sbjct: 946 PPPPPPPPLVSAAGG 960
>SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein
Cap1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 551
Score = 26.2 bits (55), Expect = 5.7
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +3
Query: 369 PPPPPXPPP 395
PPPPP PPP
Sbjct: 306 PPPPPPPPP 314
Score = 26.2 bits (55), Expect = 5.7
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +3
Query: 372 PPPPXPPPP 398
PPPP PPPP
Sbjct: 306 PPPPPPPPP 314
Score = 25.4 bits (53), Expect = 9.9
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +3
Query: 408 GGXPPPPPP 434
GG PPPPPP
Sbjct: 303 GGLPPPPPP 311
>SPAC26A3.16 |dph1|ucp5|UBA domain protein Dph1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 354
Score = 25.8 bits (54), Expect = 7.5
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = -3
Query: 433 GGGGGGXPPPXXGGGGXGGGGG 368
GGG GG GG G GG GG
Sbjct: 225 GGGLGGAGLGGLGGAGLGGFGG 246
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 25.4 bits (53), Expect = 9.9
Identities = 12/22 (54%), Positives = 12/22 (54%), Gaps = 1/22 (4%)
Frame = -1
Query: 381 GGXGGXXXGXXGGGGX-GXGGG 319
GG GG G GGG G GGG
Sbjct: 152 GGFGGNSRGGFGGGSRGGFGGG 173
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,612,990
Number of Sequences: 5004
Number of extensions: 26445
Number of successful extensions: 604
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 70
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 412
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 406444570
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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