Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_A07
         (928 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q7JP75 Cluster: Cytokinesis defect protein 1, isoform b...    36   1.9  
UniRef50_Q54ER5 Cluster: Formin homology domain-containing prote...    34   4.5  
UniRef50_Q0D4Y8 Cluster: Os07g0596300 protein; n=7; Eukaryota|Re...    33   7.8  
UniRef50_Q54H12 Cluster: Actin-binding protein; n=2; Dictyosteli...    33   7.8  
UniRef50_A0BFK7 Cluster: Chromosome undetermined scaffold_104, w...    33   7.8  
UniRef50_Q6C7Q8 Cluster: Similar to tr|Q95JC9 Sus scrofa Basic p...    33   7.8  
UniRef50_O60879 Cluster: Protein diaphanous homolog 2; n=26; Eut...    33   7.8  

>UniRef50_Q7JP75 Cluster: Cytokinesis defect protein 1, isoform b;
           n=6; cellular organisms|Rep: Cytokinesis defect protein
           1, isoform b - Caenorhabditis elegans
          Length = 1437

 Score = 35.5 bits (78), Expect = 1.9
 Identities = 13/22 (59%), Positives = 13/22 (59%)
 Frame = -2

Query: 543 PPPPXXXXXXGGXPPPPPXGXF 478
           PPPP      GG PPPPP G F
Sbjct: 772 PPPPPPGGFKGGPPPPPPPGMF 793



 Score = 33.5 bits (73), Expect = 7.8
 Identities = 12/20 (60%), Positives = 12/20 (60%)
 Frame = -2

Query: 543 PPPPXXXXXXGGXPPPPPXG 484
           PPPP      GG PPPPP G
Sbjct: 714 PPPPGLPPITGGPPPPPPPG 733


>UniRef50_Q54ER5 Cluster: Formin homology domain-containing protein;
            n=1; Dictyostelium discoideum AX4|Rep: Formin homology
            domain-containing protein - Dictyostelium discoideum AX4
          Length = 2546

 Score = 34.3 bits (75), Expect = 4.5
 Identities = 14/31 (45%), Positives = 15/31 (48%)
 Frame = -2

Query: 543  PPPPXXXXXXGGXPPPPPXGXFXXXXKKKKK 451
            PPPP      GG PPPPP G       K K+
Sbjct: 1079 PPPPPPKGGKGGPPPPPPIGGIGSKVVKVKE 1109


>UniRef50_Q0D4Y8 Cluster: Os07g0596300 protein; n=7; Eukaryota|Rep:
           Os07g0596300 protein - Oryza sativa subsp. japonica
           (Rice)
          Length = 754

 Score = 33.5 bits (73), Expect = 7.8
 Identities = 12/20 (60%), Positives = 12/20 (60%)
 Frame = -2

Query: 543 PPPPXXXXXXGGXPPPPPXG 484
           PPPP      GG PPPPP G
Sbjct: 258 PPPPAPGGRLGGPPPPPPPG 277


>UniRef50_Q54H12 Cluster: Actin-binding protein; n=2; Dictyostelium
           discoideum|Rep: Actin-binding protein - Dictyostelium
           discoideum AX4
          Length = 1220

 Score = 33.5 bits (73), Expect = 7.8
 Identities = 12/20 (60%), Positives = 12/20 (60%)
 Frame = -2

Query: 543 PPPPXXXXXXGGXPPPPPXG 484
           PPPP      GG PPPPP G
Sbjct: 609 PPPPPPPMMGGGPPPPPPMG 628


>UniRef50_A0BFK7 Cluster: Chromosome undetermined scaffold_104,
           whole genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_104,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 1152

 Score = 33.5 bits (73), Expect = 7.8
 Identities = 12/20 (60%), Positives = 12/20 (60%)
 Frame = -2

Query: 543 PPPPXXXXXXGGXPPPPPXG 484
           PPPP      GG PPPPP G
Sbjct: 660 PPPPPPGSKAGGPPPPPPPG 679


>UniRef50_Q6C7Q8 Cluster: Similar to tr|Q95JC9 Sus scrofa Basic
           proline-rich protein; n=1; Yarrowia lipolytica|Rep:
           Similar to tr|Q95JC9 Sus scrofa Basic proline-rich
           protein - Yarrowia lipolytica (Candida lipolytica)
          Length = 659

 Score = 33.5 bits (73), Expect = 7.8
 Identities = 12/20 (60%), Positives = 12/20 (60%)
 Frame = -2

Query: 543 PPPPXXXXXXGGXPPPPPXG 484
           PPPP      GG PPPPP G
Sbjct: 6   PPPPPPPPGFGGPPPPPPPG 25


>UniRef50_O60879 Cluster: Protein diaphanous homolog 2; n=26;
           Eutheria|Rep: Protein diaphanous homolog 2 - Homo
           sapiens (Human)
          Length = 1101

 Score = 33.5 bits (73), Expect = 7.8
 Identities = 12/20 (60%), Positives = 12/20 (60%)
 Frame = -2

Query: 543 PPPPXXXXXXGGXPPPPPXG 484
           PPPP      GG PPPPP G
Sbjct: 591 PPPPPPPLLFGGPPPPPPLG 610


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 387,512,553
Number of Sequences: 1657284
Number of extensions: 5051439
Number of successful extensions: 26692
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 6334
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17078
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 85260991088
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)