Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP03_F_A07
(928 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0686 - 30900748-30902167,30903442-30904742 33 0.24
12_01_0033 - 272848-272943,274026-274169,274264-274375,274521-27... 31 0.98
11_01_0035 - 256087-256185,256287-256430,256521-256632,256777-25... 31 0.98
07_03_1136 + 24218601-24218734,24218769-24219906 31 1.3
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 30 2.3
07_01_0080 + 587674-588510 29 5.2
07_03_0329 + 16840051-16840917,16840999-16841342,16841444-168415... 29 6.9
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076 29 6.9
11_02_0065 - 7938007-7938393,7939292-7939435,7940597-7940665,794... 28 9.2
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 28 9.2
01_06_1104 - 34551466-34551572,34552019-34553057 28 9.2
01_01_0892 + 7037384-7037795,7038447-7038962,7039507-7039593,703... 28 9.2
01_01_0446 + 3321832-3322232,3322398-3322455,3322810-3323748,332... 28 9.2
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 33.5 bits (73), Expect = 0.24
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = -2
Query: 543 PPPPXXXXXXGGXPPPPPXG 484
PPPP GG PPPPP G
Sbjct: 365 PPPPPPGGKKGGPPPPPPKG 384
Score = 29.9 bits (64), Expect = 3.0
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = -1
Query: 541 PPPXXXXXXGGXPXPPPXGG 482
PPP GG P PPP GG
Sbjct: 366 PPPPPGGKKGGPPPPPPKGG 385
Score = 28.3 bits (60), Expect = 9.2
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -2
Query: 543 PPPPXXXXXXGGXPPPPP 490
PPPP G PPPPP
Sbjct: 364 PPPPPPPGGKKGGPPPPP 381
>12_01_0033 -
272848-272943,274026-274169,274264-274375,274521-274702,
274781-274912,275038-276330,279841-280545,280649-280695,
280787-280865
Length = 929
Score = 31.5 bits (68), Expect = 0.98
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -2
Query: 543 PPPPXXXXXXGGXPPPPP 490
PPPP GG PPPPP
Sbjct: 624 PPPPPPPGKPGGPPPPPP 641
>11_01_0035 -
256087-256185,256287-256430,256521-256632,256777-256958,
257038-257169,257297-258589,259133-259837,260465-260549,
260604-260650,260810-260900,261838-262101,262195-262309,
262455-262570,262713-262847,262969-263036,263292-263411
Length = 1235
Score = 31.5 bits (68), Expect = 0.98
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -2
Query: 543 PPPPXXXXXXGGXPPPPP 490
PPPP GG PPPPP
Sbjct: 929 PPPPPPPGKPGGPPPPPP 946
Score = 30.3 bits (65), Expect = 2.3
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = -2
Query: 543 PPPPXXXXXXGGXPPPPPXG 484
PPPP G PPPPP G
Sbjct: 930 PPPPPPGKPGGPPPPPPPPG 949
>07_03_1136 + 24218601-24218734,24218769-24219906
Length = 423
Score = 31.1 bits (67), Expect = 1.3
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = +2
Query: 485 PXGGGGGXPPXXXXXXGGGG 544
P GGGGG PP GGGG
Sbjct: 109 PGGGGGGGPPSLPPGAGGGG 128
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 30.3 bits (65), Expect = 2.3
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = -2
Query: 543 PPPPXXXXXXGGXPPPPPXG 484
PPPP G PPPPP G
Sbjct: 1109 PPPPPPPGGITGVPPPPPIG 1128
Score = 30.3 bits (65), Expect = 2.3
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = -2
Query: 543 PPPPXXXXXXGGXPPPPPXG 484
PP P GG PPPPP G
Sbjct: 1136 PPAPPLPEGIGGVPPPPPVG 1155
Score = 29.9 bits (64), Expect = 3.0
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = -3
Query: 542 PPPPXXXXXGGGXXPPPPXG 483
PPPP GG PPPP G
Sbjct: 1149 PPPPPVGGLGGPPAPPPPAG 1168
>07_01_0080 + 587674-588510
Length = 278
Score = 29.1 bits (62), Expect = 5.2
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -2
Query: 543 PPPPXXXXXXGGXPPPPP 490
PPPP G PPPPP
Sbjct: 91 PPPPPPPPPSSGSPPPPP 108
Score = 29.1 bits (62), Expect = 5.2
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -2
Query: 543 PPPPXXXXXXGGXPPPPP 490
PPPP G PPPPP
Sbjct: 92 PPPPPPPPSSGSPPPPPP 109
>07_03_0329 +
16840051-16840917,16840999-16841342,16841444-16841574,
16841671-16841792,16841877-16841983,16842104-16842236,
16842342-16842458,16842560-16842667,16842716-16842742,
16842759-16842830,16843462-16843584,16843671-16843833,
16844140-16844264,16844355-16844489,16844574-16844677,
16844772-16844834,16844930-16844993,16845186-16845318,
16845414-16845487,16845603-16845697,16845799-16845830,
16846201-16846355
Length = 1097
Score = 28.7 bits (61), Expect = 6.9
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +2
Query: 491 GGGGGXPPXXXXXXGGGG 544
GGGGG PP GGGG
Sbjct: 62 GGGGGGPPYYGGGGGGGG 79
>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
Length = 906
Score = 28.7 bits (61), Expect = 6.9
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -2
Query: 543 PPPPXXXXXXGGXPPPP 493
PPPP GG PPPP
Sbjct: 371 PPPPGAAGRGGGGPPPP 387
>11_02_0065 -
7938007-7938393,7939292-7939435,7940597-7940665,
7940762-7940809,7941488-7941584,7941688-7941767,
7941841-7941912,7942256-7942350,7943903-7943984,
7945176-7945209,7945255-7945262,7945657-7946058
Length = 505
Score = 28.3 bits (60), Expect = 9.2
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = -2
Query: 543 PPPPXXXXXXGGXPPPPPXGXF 478
PPPP PPPPP F
Sbjct: 54 PPPPQVIRVFAAAPPPPPAAFF 75
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 28.3 bits (60), Expect = 9.2
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -2
Query: 543 PPPPXXXXXXGGXPPPPP 490
PPPP G PPPPP
Sbjct: 766 PPPPQAPKPPGTVPPPPP 783
>01_06_1104 - 34551466-34551572,34552019-34553057
Length = 381
Score = 28.3 bits (60), Expect = 9.2
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +1
Query: 484 PXGGGGXXPPPXXXXXGGGG 543
P G GG PPP GGGG
Sbjct: 58 PSGPGGRLPPPPRSYGGGGG 77
>01_01_0892 +
7037384-7037795,7038447-7038962,7039507-7039593,
7039698-7039768,7040148-7040224,7040380-7040527,
7040973-7041134,7041374-7041694
Length = 597
Score = 28.3 bits (60), Expect = 9.2
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -2
Query: 543 PPPPXXXXXXGGXPPPPP 490
PPPP G PPPPP
Sbjct: 114 PPPPHLLHYYGHPPPPPP 131
>01_01_0446 +
3321832-3322232,3322398-3322455,3322810-3323748,
3324504-3324654,3324740-3324818,3325826-3325934
Length = 578
Score = 28.3 bits (60), Expect = 9.2
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +1
Query: 484 PXGGGGXXPPPXXXXXGGGG 543
P GGG PPP GGGG
Sbjct: 388 PGGGGPGAPPPYHGGGGGGG 407
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,171,422
Number of Sequences: 37544
Number of extensions: 265262
Number of successful extensions: 2048
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 675
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1492
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2647531240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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