Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP03_F_A07
(928 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 36 0.054
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 36 0.054
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 36 0.054
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 31 0.88
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 31 0.88
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 31 0.88
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 31 0.88
Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 29 4.7
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 29 4.7
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 29 4.7
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 29 4.7
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 29 4.7
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 29 4.7
Z78013-8|CAN99686.1| 373|Caenorhabditis elegans Hypothetical pr... 28 8.2
AF016446-2|AAC24165.1| 70|Caenorhabditis elegans Hypothetical ... 28 8.2
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 35.5 bits (78), Expect = 0.054
Identities = 13/22 (59%), Positives = 13/22 (59%)
Frame = -2
Query: 543 PPPPXXXXXXGGXPPPPPXGXF 478
PPPP GG PPPPP G F
Sbjct: 772 PPPPPPGGFKGGPPPPPPPGMF 793
Score = 33.5 bits (73), Expect = 0.22
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = -2
Query: 543 PPPPXXXXXXGGXPPPPPXG 484
PPPP GG PPPPP G
Sbjct: 714 PPPPGLPPITGGPPPPPPPG 733
Score = 29.9 bits (64), Expect = 2.7
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = -1
Query: 541 PPPXXXXXXGGXPXPPPXGG 482
PPP GG P PPP GG
Sbjct: 715 PPPGLPPITGGPPPPPPPGG 734
Score = 29.9 bits (64), Expect = 2.7
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = -2
Query: 543 PPPPXXXXXXGGXPPPPPXG 484
PPP GG PPPPP G
Sbjct: 730 PPPGGLPPITGGPPPPPPPG 749
Score = 29.1 bits (62), Expect = 4.7
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -2
Query: 543 PPPPXXXXXXGGXPPPPP 490
PPPP G PPPPP
Sbjct: 745 PPPPGGLPPISGGPPPPP 762
Score = 29.1 bits (62), Expect = 4.7
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -2
Query: 543 PPPPXXXXXXGGXPPPPPXGXF 478
PPPP PPPPP G F
Sbjct: 759 PPPPPPPGGCPPPPPPPPPGGF 780
Score = 28.3 bits (60), Expect = 8.2
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -2
Query: 543 PPPPXXXXXXGGXPPPPP 490
PPPP G PPPPP
Sbjct: 713 PPPPPGLPPITGGPPPPP 730
Score = 28.3 bits (60), Expect = 8.2
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -2
Query: 543 PPPPXXXXXXGGXPPPPP 490
PPPP G PPPPP
Sbjct: 729 PPPPGGLPPITGGPPPPP 746
Score = 28.3 bits (60), Expect = 8.2
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -2
Query: 543 PPPPXXXXXXGGXPPPPP 490
PPPP G PPPPP
Sbjct: 771 PPPPPPPGGFKGGPPPPP 788
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 35.5 bits (78), Expect = 0.054
Identities = 13/22 (59%), Positives = 13/22 (59%)
Frame = -2
Query: 543 PPPPXXXXXXGGXPPPPPXGXF 478
PPPP GG PPPPP G F
Sbjct: 772 PPPPPPGGFKGGPPPPPPPGMF 793
Score = 33.5 bits (73), Expect = 0.22
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = -2
Query: 543 PPPPXXXXXXGGXPPPPPXG 484
PPPP GG PPPPP G
Sbjct: 714 PPPPGLPPITGGPPPPPPPG 733
Score = 29.9 bits (64), Expect = 2.7
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = -1
Query: 541 PPPXXXXXXGGXPXPPPXGG 482
PPP GG P PPP GG
Sbjct: 715 PPPGLPPITGGPPPPPPPGG 734
Score = 29.9 bits (64), Expect = 2.7
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = -2
Query: 543 PPPPXXXXXXGGXPPPPPXG 484
PPP GG PPPPP G
Sbjct: 730 PPPGGLPPITGGPPPPPPPG 749
Score = 29.1 bits (62), Expect = 4.7
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -2
Query: 543 PPPPXXXXXXGGXPPPPP 490
PPPP G PPPPP
Sbjct: 745 PPPPGGLPPISGGPPPPP 762
Score = 29.1 bits (62), Expect = 4.7
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -2
Query: 543 PPPPXXXXXXGGXPPPPPXGXF 478
PPPP PPPPP G F
Sbjct: 759 PPPPPPPGGCPPPPPPPPPGGF 780
Score = 28.3 bits (60), Expect = 8.2
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -2
Query: 543 PPPPXXXXXXGGXPPPPP 490
PPPP G PPPPP
Sbjct: 713 PPPPPGLPPITGGPPPPP 730
Score = 28.3 bits (60), Expect = 8.2
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -2
Query: 543 PPPPXXXXXXGGXPPPPP 490
PPPP G PPPPP
Sbjct: 729 PPPPGGLPPITGGPPPPP 746
Score = 28.3 bits (60), Expect = 8.2
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -2
Query: 543 PPPPXXXXXXGGXPPPPP 490
PPPP G PPPPP
Sbjct: 771 PPPPPPPGGFKGGPPPPP 788
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 35.5 bits (78), Expect = 0.054
Identities = 13/22 (59%), Positives = 13/22 (59%)
Frame = -2
Query: 543 PPPPXXXXXXGGXPPPPPXGXF 478
PPPP GG PPPPP G F
Sbjct: 355 PPPPPPGGFKGGPPPPPPPGMF 376
Score = 33.5 bits (73), Expect = 0.22
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = -2
Query: 543 PPPPXXXXXXGGXPPPPPXG 484
PPPP GG PPPPP G
Sbjct: 297 PPPPGLPPITGGPPPPPPPG 316
Score = 29.9 bits (64), Expect = 2.7
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = -1
Query: 541 PPPXXXXXXGGXPXPPPXGG 482
PPP GG P PPP GG
Sbjct: 298 PPPGLPPITGGPPPPPPPGG 317
Score = 29.9 bits (64), Expect = 2.7
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = -2
Query: 543 PPPPXXXXXXGGXPPPPPXG 484
PPP GG PPPPP G
Sbjct: 313 PPPGGLPPITGGPPPPPPPG 332
Score = 29.1 bits (62), Expect = 4.7
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -2
Query: 543 PPPPXXXXXXGGXPPPPP 490
PPPP G PPPPP
Sbjct: 328 PPPPGGLPPISGGPPPPP 345
Score = 29.1 bits (62), Expect = 4.7
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -2
Query: 543 PPPPXXXXXXGGXPPPPPXGXF 478
PPPP PPPPP G F
Sbjct: 342 PPPPPPPGGCPPPPPPPPPGGF 363
Score = 28.3 bits (60), Expect = 8.2
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -2
Query: 543 PPPPXXXXXXGGXPPPPP 490
PPPP G PPPPP
Sbjct: 296 PPPPPGLPPITGGPPPPP 313
Score = 28.3 bits (60), Expect = 8.2
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -2
Query: 543 PPPPXXXXXXGGXPPPPP 490
PPPP G PPPPP
Sbjct: 312 PPPPGGLPPITGGPPPPP 329
Score = 28.3 bits (60), Expect = 8.2
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -2
Query: 543 PPPPXXXXXXGGXPPPPP 490
PPPP G PPPPP
Sbjct: 354 PPPPPPPGGFKGGPPPPP 371
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 31.5 bits (68), Expect = 0.88
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -2
Query: 543 PPPPXXXXXXGGXPPPPP 490
PPPP GG PPPPP
Sbjct: 539 PPPPPVGMANGGPPPPPP 556
Score = 29.1 bits (62), Expect = 4.7
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -2
Query: 543 PPPPXXXXXXGGXPPPPP 490
PPPP G PPPPP
Sbjct: 538 PPPPPPVGMANGGPPPPP 555
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 31.5 bits (68), Expect = 0.88
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -2
Query: 543 PPPPXXXXXXGGXPPPPP 490
PPPP GG PPPPP
Sbjct: 335 PPPPPGMRYPGGMPPPPP 352
Score = 28.3 bits (60), Expect = 8.2
Identities = 12/22 (54%), Positives = 12/22 (54%), Gaps = 2/22 (9%)
Frame = -2
Query: 543 PPPPXXXXXXG--GXPPPPPXG 484
PPPP G G PPPPP G
Sbjct: 319 PPPPSRFGPPGMGGMPPPPPPG 340
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 31.5 bits (68), Expect = 0.88
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -2
Query: 543 PPPPXXXXXXGGXPPPPP 490
PPPP GG PPPPP
Sbjct: 345 PPPPPGMRYPGGMPPPPP 362
Score = 28.3 bits (60), Expect = 8.2
Identities = 12/22 (54%), Positives = 12/22 (54%), Gaps = 2/22 (9%)
Frame = -2
Query: 543 PPPPXXXXXXG--GXPPPPPXG 484
PPPP G G PPPPP G
Sbjct: 329 PPPPSRFGPPGMGGMPPPPPPG 350
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 31.5 bits (68), Expect = 0.88
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -2
Query: 543 PPPPXXXXXXGGXPPPPP 490
PPPP GG PPPPP
Sbjct: 577 PPPPPPPPMLGGPPPPPP 594
Score = 30.3 bits (65), Expect = 2.0
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = -2
Query: 543 PPPPXXXXXXGGXPPPPPXG 484
PPPP G PPPPP G
Sbjct: 578 PPPPPPPMLGGPPPPPPPPG 597
Score = 29.1 bits (62), Expect = 4.7
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -2
Query: 543 PPPPXXXXXXGGXPPPPP 490
PPPP G PPPPP
Sbjct: 563 PPPPPLPQNLSGAPPPPP 580
Score = 29.1 bits (62), Expect = 4.7
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -2
Query: 543 PPPPXXXXXXGGXPPPPP 490
PPPP G PPPPP
Sbjct: 564 PPPPLPQNLSGAPPPPPP 581
>Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical
protein C33B4.3b protein.
Length = 993
Score = 29.1 bits (62), Expect = 4.7
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -2
Query: 543 PPPPXXXXXXGGXPPPPP 490
PPPP G PPPPP
Sbjct: 795 PPPPPLPPISSGAPPPPP 812
Score = 29.1 bits (62), Expect = 4.7
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -2
Query: 543 PPPPXXXXXXGGXPPPPP 490
PPPP G PPPPP
Sbjct: 796 PPPPLPPISSGAPPPPPP 813
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical
protein C33B4.3a protein.
Length = 1110
Score = 29.1 bits (62), Expect = 4.7
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -2
Query: 543 PPPPXXXXXXGGXPPPPP 490
PPPP G PPPPP
Sbjct: 795 PPPPPLPPISSGAPPPPP 812
Score = 29.1 bits (62), Expect = 4.7
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -2
Query: 543 PPPPXXXXXXGGXPPPPP 490
PPPP G PPPPP
Sbjct: 796 PPPPLPPISSGAPPPPPP 813
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 29.1 bits (62), Expect = 4.7
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -2
Query: 543 PPPPXXXXXXGGXPPPPP 490
PPPP G PPPPP
Sbjct: 125 PPPPRKSRAGGSSPPPPP 142
Score = 28.7 bits (61), Expect = 6.2
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -3
Query: 542 PPPPXXXXXGGGXXPPPP 489
PPPP GG PPPP
Sbjct: 124 PPPPPRKSRAGGSSPPPP 141
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 29.1 bits (62), Expect = 4.7
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -2
Query: 543 PPPPXXXXXXGGXPPPPP 490
PPPP G PPPPP
Sbjct: 234 PPPPPLPPVGAGAPPPPP 251
Score = 29.1 bits (62), Expect = 4.7
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -2
Query: 543 PPPPXXXXXXGGXPPPPP 490
PPPP G PPPPP
Sbjct: 235 PPPPLPPVGAGAPPPPPP 252
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 29.1 bits (62), Expect = 4.7
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -2
Query: 543 PPPPXXXXXXGGXPPPPP 490
PPPP G PPPPP
Sbjct: 220 PPPPPLPPVGAGAPPPPP 237
Score = 29.1 bits (62), Expect = 4.7
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -2
Query: 543 PPPPXXXXXXGGXPPPPP 490
PPPP G PPPPP
Sbjct: 221 PPPPLPPVGAGAPPPPPP 238
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 29.1 bits (62), Expect = 4.7
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -2
Query: 543 PPPPXXXXXXGGXPPPPP 490
PPPP G PPPPP
Sbjct: 220 PPPPPLPPVGAGAPPPPP 237
Score = 29.1 bits (62), Expect = 4.7
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -2
Query: 543 PPPPXXXXXXGGXPPPPP 490
PPPP G PPPPP
Sbjct: 221 PPPPLPPVGAGAPPPPPP 238
>Z78013-8|CAN99686.1| 373|Caenorhabditis elegans Hypothetical
protein F15B9.10 protein.
Length = 373
Score = 28.3 bits (60), Expect = 8.2
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +1
Query: 484 PXGGGGXXPPPXXXXXGGGG 543
P GGGG P P GGGG
Sbjct: 264 PMGGGGGYPQPPPQQGGGGG 283
>AF016446-2|AAC24165.1| 70|Caenorhabditis elegans Hypothetical
protein C02E7.6 protein.
Length = 70
Score = 28.3 bits (60), Expect = 8.2
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -3
Query: 542 PPPPXXXXXGGGXXPPP 492
PPPP GGG PPP
Sbjct: 31 PPPPPACGCGGGAAPPP 47
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,825,421
Number of Sequences: 27780
Number of extensions: 133167
Number of successful extensions: 1123
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 242
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 711
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2381234086
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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