Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_A03
         (919 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           27   0.16 
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        23   3.3  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    22   5.8  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      22   7.7  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      22   7.7  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    22   7.7  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    22   7.7  

>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 27.5 bits (58), Expect = 0.16
 Identities = 14/42 (33%), Positives = 15/42 (35%), Gaps = 1/42 (2%)
 Frame = +2

Query: 449 GXGAPPXPXXRATXPSPPPXXPXXP-PPPFXTPXXXPPQXPT 571
           G    P P    T P P P  P  P P P  +P    P   T
Sbjct: 66  GWQVTPLPSDGTTSPEPDPEIPVAPEPAPLASPLVQEPGSST 107


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 10/24 (41%), Positives = 10/24 (41%)
 Frame = +3

Query: 699 PXXPPPXPTPTPPXXPXXXXPPPP 770
           P   P   TPTPP  P      PP
Sbjct: 411 PNVSPHYVTPTPPEAPLFQNVLPP 434


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 22.2 bits (45), Expect = 5.8
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = +3

Query: 36  LKIFITVLTGRAVLFYMLVL 95
           L IF+  L+G + +F ML++
Sbjct: 81  LLIFVVSLSGNSAVFIMLII 100


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.8 bits (44), Expect = 7.7
 Identities = 8/19 (42%), Positives = 8/19 (42%)
 Frame = +2

Query: 752 PXPPPPXXXPPPXPXXAXP 808
           P PP P   PP  P    P
Sbjct: 736 PPPPHPHHQPPRNPVGTNP 754



 Score = 21.8 bits (44), Expect = 7.7
 Identities = 8/18 (44%), Positives = 8/18 (44%)
 Frame = +3

Query: 708 PPPXPTPTPPXXPXXXXP 761
           PPP P   PP  P    P
Sbjct: 737 PPPHPHHQPPRNPVGTNP 754


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.8 bits (44), Expect = 7.7
 Identities = 8/19 (42%), Positives = 8/19 (42%)
 Frame = +2

Query: 752 PXPPPPXXXPPPXPXXAXP 808
           P PP P   PP  P    P
Sbjct: 628 PPPPHPHHQPPRNPVGTNP 646



 Score = 21.8 bits (44), Expect = 7.7
 Identities = 8/18 (44%), Positives = 8/18 (44%)
 Frame = +3

Query: 708 PPPXPTPTPPXXPXXXXP 761
           PPP P   PP  P    P
Sbjct: 629 PPPHPHHQPPRNPVGTNP 646


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 21.8 bits (44), Expect = 7.7
 Identities = 6/17 (35%), Positives = 12/17 (70%)
 Frame = +3

Query: 144 FFSIAYSLNLNCCAIVF 194
           +F   +S  L+CC+++F
Sbjct: 90  YFEEVFSSLLSCCSVIF 106


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 21.8 bits (44), Expect = 7.7
 Identities = 6/17 (35%), Positives = 12/17 (70%)
 Frame = +3

Query: 144 FFSIAYSLNLNCCAIVF 194
           +F   +S  L+CC+++F
Sbjct: 90  YFEEVFSSLLSCCSVIF 106


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,445
Number of Sequences: 336
Number of extensions: 3762
Number of successful extensions: 22
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 25651384
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)