Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP03_F_A02
(853 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0381 + 17398972-17399014,17400823-17400981,17401066-174012... 85 7e-17
04_04_0724 + 27578337-27578371,27578492-27578607,27578717-275788... 83 2e-16
08_02_1600 + 28133818-28133900,28134240-28134345,28135169-281352... 65 8e-11
08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,336... 38 0.013
06_03_0500 + 21470681-21470952,21471049-21471089,21472322-214724... 31 1.5
08_01_0882 - 8663006-8663068,8663260-8663328,8663410-8663515,866... 29 3.6
07_03_0558 + 19461369-19462448 29 3.6
03_03_0061 - 14159354-14159547,14160898-14161021 29 4.7
02_04_0407 + 22645775-22645865,22645998-22646269 29 4.7
04_04_1354 - 32841778-32841983,32842079-32843093,32843184-328435... 29 6.2
01_06_1686 + 39188948-39190231 29 6.2
01_01_0387 + 2999222-2999495,2999834-2999934 29 6.2
12_02_0431 - 19000267-19000719 28 8.2
09_06_0277 - 21983049-21983080,21983250-21984788,21986619-219866... 28 8.2
08_02_1319 + 26117353-26117784 28 8.2
07_03_0594 - 19833967-19834557 28 8.2
04_01_0381 - 5061901-5061914,5062044-5062100,5062268-5063231 28 8.2
02_02_0240 + 8196140-8198248,8198381-8198650 28 8.2
>10_08_0381 +
17398972-17399014,17400823-17400981,17401066-17401241,
17401565-17401842,17401938-17402073,17402183-17402294,
17402421-17402515
Length = 332
Score = 85.0 bits (201), Expect = 7e-17
Identities = 41/75 (54%), Positives = 51/75 (68%)
Frame = +1
Query: 193 EPIRVVVTGAAGQIAYSLLYQIASGAVFGPQQPVFLHLLDIAPMMGVLEGVVMELADCAL 372
EP+RV+VTGAAGQI Y+L+ IA G + G QPV LH+LDI P L G+ MEL D A
Sbjct: 4 EPMRVLVTGAAGQIGYALVPMIARGVMLGADQPVILHMLDIPPATESLNGLKMELVDAAF 63
Query: 373 PLLAGVLPTANPEEA 417
PLL G++ T + EA
Sbjct: 64 PLLKGIVATTDVVEA 78
Score = 44.8 bits (101), Expect = 9e-05
Identities = 27/80 (33%), Positives = 40/80 (50%)
Frame = +2
Query: 404 ILKKLQDVAAAFLXGAMPRKEGMERKDLLAANVRXFKXKARLWTKRLVXM*RSLVVGHPT 583
+++ V A + G PRKEGMERKD+++ NV +K +A + LVV +P
Sbjct: 75 VVEACTGVNVAVMVGGFPRKEGMERKDVMSKNVSIYKSQASALEAHAAPNCKVLVVANPA 134
Query: 584 PIPNAPICSKICPPXFPKXN 643
NA I + P P+ N
Sbjct: 135 N-TNALILKEFA-PSIPEKN 152
>04_04_0724 +
27578337-27578371,27578492-27578607,27578717-27578875,
27578954-27579129,27580406-27580683,27580759-27580894,
27580984-27581095,27581177-27581268
Length = 367
Score = 83.4 bits (197), Expect = 2e-16
Identities = 40/75 (53%), Positives = 52/75 (69%)
Frame = +1
Query: 193 EPIRVVVTGAAGQIAYSLLYQIASGAVFGPQQPVFLHLLDIAPMMGVLEGVVMELADCAL 372
+P++V+VTGAAGQI Y+++ IA G + G QPV LHLLD+ L GV MEL D AL
Sbjct: 40 KPVKVLVTGAAGQIGYAIVAMIARGLMLGADQPVVLHLLDLPVAANALNGVRMELIDAAL 99
Query: 373 PLLAGVLPTANPEEA 417
PLL GV+ T++ EA
Sbjct: 100 PLLRGVVATSDEAEA 114
Score = 42.3 bits (95), Expect = 5e-04
Identities = 23/66 (34%), Positives = 35/66 (53%)
Frame = +2
Query: 425 VAAAFLXGAMPRKEGMERKDLLAANVRXFKXKARLWTKRLVXM*RSLVVGHPTPIPNAPI 604
V A + G PR++GMERKDL++ NV +K +A + + LVV +P NA +
Sbjct: 118 VNVAIVIGGWPRRDGMERKDLISKNVTIYKSQASALHQHAAPNCKVLVVANPAN-TNALV 176
Query: 605 CSKICP 622
+ P
Sbjct: 177 LKEFAP 182
>08_02_1600 +
28133818-28133900,28134240-28134345,28135169-28135255,
28135354-28135438,28135510-28135691,28135921-28135991,
28136078-28136168,28136250-28136324,28136436-28136537,
28136620-28136742,28136823-28136891,28136990-28137058,
28137158-28137211,28137315-28137368
Length = 416
Score = 64.9 bits (151), Expect = 8e-11
Identities = 33/64 (51%), Positives = 41/64 (64%)
Frame = +1
Query: 199 IRVVVTGAAGQIAYSLLYQIASGAVFGPQQPVFLHLLDIAPMMGVLEGVVMELADCALPL 378
+ V V+GAAG I+ LL+++ASG VFGP QP+ L LL + LEGV MEL D PL
Sbjct: 74 VNVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSIQALEGVAMELEDSLYPL 133
Query: 379 LAGV 390
L V
Sbjct: 134 LREV 137
>08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,
33643-34147,34250-34358,34436-34548,34619-34806,
35481-36129,36169-36691,36760-36911,37042-37141,
37301-37416
Length = 1530
Score = 37.5 bits (83), Expect = 0.013
Identities = 25/76 (32%), Positives = 28/76 (36%), Gaps = 1/76 (1%)
Frame = +2
Query: 578 PTPIPN-APICSKICPPXFPKXNFPGHDPXLDPKQGPXPQLXRLKIGXXPXKECLXXVIX 754
P P+P+ +P C PP P P P L P P P L G P I
Sbjct: 1146 PPPLPSDSPPCQPPLPPSPPPAT-PPPPPPLSPSLPPPPPPPPLPSGPPPQPAPPPLPIQ 1204
Query: 755 PGGXPXPPXPXXPEXL 802
P P PP P P L
Sbjct: 1205 PPPIPPPPVPSSPSSL 1220
>06_03_0500 +
21470681-21470952,21471049-21471089,21472322-21472485,
21472577-21472679,21472806-21472975,21473766-21474239
Length = 407
Score = 30.7 bits (66), Expect = 1.5
Identities = 25/89 (28%), Positives = 31/89 (34%), Gaps = 3/89 (3%)
Frame = -2
Query: 840 GGPPNQXGXGHXGXHSGXXGXGGXGXPPGXITXXK---HSLXGXXPIXSRXSWGXGPCFG 670
GG G G +SG GG G G + G +G P FG
Sbjct: 277 GGGHRSSYRGSGGGNSGSSSSGGYGGYGGGYRSAAAAYYGSTGYAGYGRGYGYGGNPAFG 336
Query: 669 SRXGSWPGKFXFGNXGGHILEHIGAFGIG 583
S GS G +G G + GA+G G
Sbjct: 337 SGFGSGYGGSMYGGPYGAYGAYGGAYGGG 365
>08_01_0882 -
8663006-8663068,8663260-8663328,8663410-8663515,
8663889-8663944,8664163-8664222,8664310-8664529,
8664561-8664655,8664757-8664882,8664954-8665008,
8666163-8666290
Length = 325
Score = 29.5 bits (63), Expect = 3.6
Identities = 16/55 (29%), Positives = 27/55 (49%)
Frame = +1
Query: 175 GNIKMAEPIRVVVTGAAGQIAYSLLYQIASGAVFGPQQPVFLHLLDIAPMMGVLE 339
G ++ E +R+ + Q Q+A GA FGP+ P L +DIA + + +
Sbjct: 187 GEPELLEAVRLTIINNMIQYHPEASSQLALGATFGPEPPTELVDVDIATHIDIYD 241
>07_03_0558 + 19461369-19462448
Length = 359
Score = 29.5 bits (63), Expect = 3.6
Identities = 30/95 (31%), Positives = 30/95 (31%), Gaps = 5/95 (5%)
Frame = -2
Query: 846 FWGGPPNQXGXGHXGXHSGXXGXG-----GXGXPPGXITXXKHSLXGXXPIXSRXSWGXG 682
F GG G GH G G G G G G G L G G G
Sbjct: 243 FGGGGGGGLGGGHGGGFGGGAGVGSGAGGGVGGGGGFGGGGGGGLGGGHGSGFGGGAGVG 302
Query: 681 PCFGSRXGSWPGKFXFGNXGGHILEHIGAFGIGVG 577
G G G F G GG H G FG G G
Sbjct: 303 GGAGGGVGGGGG-FGGGGGGGLGGGHGGGFGAGAG 336
>03_03_0061 - 14159354-14159547,14160898-14161021
Length = 105
Score = 29.1 bits (62), Expect = 4.7
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +3
Query: 474 RGRIFLLLMCASSRXRPGFGPSGS*XCEG 560
RGR +L L C R GF +GS C G
Sbjct: 48 RGRFYLQLRCGRRRGDDGFAGAGSESCAG 76
>02_04_0407 + 22645775-22645865,22645998-22646269
Length = 120
Score = 29.1 bits (62), Expect = 4.7
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = -2
Query: 840 GGPPNQXGXGHXGXHSGXXGXGGXGXPPG 754
G PP G G+ G G G GG G PG
Sbjct: 51 GYPPRGGGYGYPGRGYGYPGRGGGGGYPG 79
>04_04_1354 - 32841778-32841983,32842079-32843093,32843184-32843518,
32843590-32844019,32844155-32844214,32844531-32844651,
32845321-32846132
Length = 992
Score = 28.7 bits (61), Expect = 6.2
Identities = 15/47 (31%), Positives = 21/47 (44%), Gaps = 1/47 (2%)
Frame = +2
Query: 557 RSLVVGHPTPI-PNAPICSKICPPXFPKXNFPGHDPXLDPKQGPXPQ 694
+ V HP P+ PN + CPP + +P P QGP P+
Sbjct: 867 QGFVPRHPPPVLPNQGFFPRRCPPFAGQDLYPWR-PPFHANQGPFPR 912
>01_06_1686 + 39188948-39190231
Length = 427
Score = 28.7 bits (61), Expect = 6.2
Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = -3
Query: 449 HQXGKQQQHLEASSGFAVGRTPAKSGRAQS-ANSMTTPSSTPIIGAISRRWRK 294
H+ + HL ++ AV PA+ A+ A S T S++ G+++R WRK
Sbjct: 13 HRHARPAGHLRCAAD-AVSTAPAERTAARVIATSSRTASASAASGSVARVWRK 64
>01_01_0387 + 2999222-2999495,2999834-2999934
Length = 124
Score = 28.7 bits (61), Expect = 6.2
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -2
Query: 819 GXGHXGXHSGXXGXGGXGXPP 757
G GH G H G GG G PP
Sbjct: 30 GGGHGGGHGYEQGYGGHGYPP 50
>12_02_0431 - 19000267-19000719
Length = 150
Score = 28.3 bits (60), Expect = 8.2
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = +1
Query: 424 CCCCFPXWCYAQKGRYGEEGSSCC 495
CCCC C ++ R G +G C
Sbjct: 94 CCCCCVSACGGRRRRRGSDGEEVC 117
>09_06_0277 -
21983049-21983080,21983250-21984788,21986619-21986655,
21987612-21987665,21987781-21987893,21988272-21988660,
21988783-21988903,21989245-21989342,21989963-21990153
Length = 857
Score = 28.3 bits (60), Expect = 8.2
Identities = 22/76 (28%), Positives = 26/76 (34%)
Frame = +2
Query: 578 PTPIPNAPICSKICPPXFPKXNFPGHDPXLDPKQGPXPQLXRLKIGXXPXKECLXXVIXP 757
P P P +P C + PP P F P P P P + P L V+ P
Sbjct: 379 PPPPPMSPSC--LLPPIIPAPTFTYSSPPPPPLYYPPP--PDISPSPPPSVTPLPPVVYP 434
Query: 758 GGXPXPPXPXXPEXLP 805
P P PE P
Sbjct: 435 S--PPEVTPSPPEIAP 448
>08_02_1319 + 26117353-26117784
Length = 143
Score = 28.3 bits (60), Expect = 8.2
Identities = 22/53 (41%), Positives = 28/53 (52%), Gaps = 7/53 (13%)
Frame = -3
Query: 437 KQQQHLEASSGFAVGRT-PAKSGRAQSANSMTT----PSSTPIIG--AISRRW 300
K ++L+A S RT PAKSGR A+S T SSTP + SR+W
Sbjct: 91 KPDKYLKAKSDSVRPRTCPAKSGRPPGASSSRTVLGCSSSTPTAARWSTSRQW 143
>07_03_0594 - 19833967-19834557
Length = 196
Score = 28.3 bits (60), Expect = 8.2
Identities = 13/41 (31%), Positives = 16/41 (39%)
Frame = -2
Query: 843 WGGPPNQXGXGHXGXHSGXXGXGGXGXPPGXITXXKHSLXG 721
W P ++ G H G G G GG G KH + G
Sbjct: 57 WYAPSSEGGADHRGGGGGGGGGGGLEIGGGGWGGGKHKVGG 97
>04_01_0381 - 5061901-5061914,5062044-5062100,5062268-5063231
Length = 344
Score = 28.3 bits (60), Expect = 8.2
Identities = 21/73 (28%), Positives = 26/73 (35%), Gaps = 6/73 (8%)
Frame = +2
Query: 584 PIPNAPICSKICPPXFPKXNFPGHDPXLD------PKQGPXPQLXRLKIGXXPXKECLXX 745
P+P I P P PG P P P PQL ++I P + L
Sbjct: 78 PLPTIQIPGLPPLPQLPTIQIPGLPPLQPLPAIQIPGLPPLPQLPTIQIPGLPTLQPLPT 137
Query: 746 VIXPGGXPXPPXP 784
+ PG P P P
Sbjct: 138 IQIPGLPPLPQLP 150
>02_02_0240 + 8196140-8198248,8198381-8198650
Length = 792
Score = 28.3 bits (60), Expect = 8.2
Identities = 19/74 (25%), Positives = 28/74 (37%), Gaps = 1/74 (1%)
Frame = +2
Query: 578 PTPIPNAPICSKICPPXFPKX-NFPGHDPXLDPKQGPXPQLXRLKIGXXPXKECLXXVIX 754
P PIP P ++ P N P P +P P+ + P + ++
Sbjct: 596 PPPIPGQPQVIRMPGSMGPMPTNIPPPPPGQNPYMPGPPRPYSMP--PPPHMPTMATMVN 653
Query: 755 PGGXPXPPXPXXPE 796
P G P PP P P+
Sbjct: 654 PIGIPQPPPPLPPQ 667
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,029,188
Number of Sequences: 37544
Number of extensions: 460773
Number of successful extensions: 1269
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1176
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1267
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2373961368
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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