Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_A01
         (802 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943...    31   1.1  
06_02_0257 - 13533689-13533714,13533799-13533925,13534013-135341...    29   5.7  
03_01_0164 - 1326002-1326409,1326410-1326428,1326523-1326647,132...    29   5.7  
07_03_1136 + 24218601-24218734,24218769-24219906                       28   7.5  
01_07_0270 - 42417782-42417850,42418207-42418342,42418826-424191...    28   9.9  

>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
            9435445-9435526,9435610-9435660,9435749-9435829,
            9435965-9436006,9436117-9436215,9438130-9438201,
            9438557-9438680,9438850-9439723,9440274-9440456,
            9440941-9442741,9442825-9443049,9443117-9443814,
            9444519-9444591
          Length = 1541

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 23/67 (34%), Positives = 23/67 (34%)
 Frame = +3

Query: 258  PXKXGGGGXPXEKKXPPPGFXSXEKNFPPRGGF*KFXXGGXXKKKFGGXPXXXPPPPXXK 437
            P   G GG P     PP G        PP  GF     GG       G     PPPP   
Sbjct: 1140 PLPEGIGGVPPP---PPVGGLGGPPAPPPPAGF----RGGTPPPNAHGGVAPPPPPPRGH 1192

Query: 438  XGGGGXP 458
             G GG P
Sbjct: 1193 GGVGGPP 1199


>06_02_0257 -
           13533689-13533714,13533799-13533925,13534013-13534121,
           13534193-13534272,13534758-13534979,13536070-13536318,
           13537032-13537484,13539834-13540556
          Length = 662

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 17/56 (30%), Positives = 21/56 (37%)
 Frame = +3

Query: 291 EKKXPPPGFXSXEKNFPPRGGF*KFXXGGXXKKKFGGXPXXXPPPPXXKXGGGGXP 458
           +++  P    S  +  PP GG      GG         P   PPPP     GGG P
Sbjct: 27  DRRGGPNPNNSYHRRGPPGGGGGD-RRGGFQLPPDAAPPPPPPPPPSSAAAGGGGP 81


>03_01_0164 -
           1326002-1326409,1326410-1326428,1326523-1326647,
           1327482-1327530,1328834-1328855,1328969-1329071
          Length = 241

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 15/48 (31%), Positives = 20/48 (41%)
 Frame = +3

Query: 213 PLXWGNPPKXXXXXGPXKXGGGGXPXEKKXPPPGFXSXEKNFPPRGGF 356
           P   G PP      G  +  GG  P     PPPG    + ++PP  G+
Sbjct: 193 PPAQGYPPAAYPPAGYPQ--GGAYPPPGSYPPPGSYPPQGSYPPPQGY 238


>07_03_1136 + 24218601-24218734,24218769-24219906
          Length = 423

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 18/54 (33%), Positives = 19/54 (35%), Gaps = 2/54 (3%)
 Frame = +3

Query: 339 PPRGGF*KFXXGGXXKKKFGGXPXXXPP--PPXXKXGGGGXPXXXXXXXXGXXP 494
           PP GG      GG   +  GG     PP  PP    GGG  P        G  P
Sbjct: 91  PPGGGGAPGPLGGGGARPPGGGGGGGPPSLPPGAGGGGGARPPAPGGGGGGGAP 144



 Score = 28.3 bits (60), Expect = 7.5
 Identities = 20/61 (32%), Positives = 21/61 (34%)
 Frame = +3

Query: 270 GGGGXPXEKKXPPPGFXSXEKNFPPRGGF*KFXXGGXXKKKFGGXPXXXPPPPXXKXGGG 449
           GGGG       PP G        PP GG      GG  +   GG     P       GGG
Sbjct: 149 GGGGGGGALARPPGGGRGGALGRPPGGG---GGGGGPGRAPGGGGGGGGPGRAPGGGGGG 205

Query: 450 G 452
           G
Sbjct: 206 G 206


>01_07_0270 -
           42417782-42417850,42418207-42418342,42418826-42419108,
           42419459-42419507,42419614-42419616
          Length = 179

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 21/72 (29%), Positives = 26/72 (36%), Gaps = 7/72 (9%)
 Frame = +3

Query: 258 PXKXGGGGXPXEKKXPPPGFXSXEKNFPPRGGF*KFXXG--GXXKKKFGGXPXXXPPP-- 425
           P +  G G P ++   PP F      F  R G+     G  G    + GG P    P   
Sbjct: 98  PSRPFGSGPPGDRPRGPPRFEGDRPRFGDRDGYRGGPRGAPGDFGGEKGGAPAEFQPSFR 157

Query: 426 ---PXXKXGGGG 452
              P    GGGG
Sbjct: 158 GSRPGFGRGGGG 169


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,559,651
Number of Sequences: 37544
Number of extensions: 447100
Number of successful extensions: 1090
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 530
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 855
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2174172540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)