Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP02_F_P24
(1395 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33) 38 0.014
SB_6280| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.077
SB_1800| Best HMM Match : LEA_4 (HMM E-Value=7.4) 36 0.10
SB_55818| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.18
SB_53582| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.18
SB_20869| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.23
SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.31
SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.54
SB_51674| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.72
SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05) 33 0.72
SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013) 33 0.72
SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10) 32 0.95
SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.95
SB_48634| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 1.2
SB_52222| Best HMM Match : SAPS (HMM E-Value=2.1e-37) 32 1.2
SB_33909| Best HMM Match : FH2 (HMM E-Value=0) 32 1.2
SB_26646| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 1.2
SB_11420| Best HMM Match : MBOAT (HMM E-Value=6.9e-06) 26 1.6
SB_2292| Best HMM Match : Extensin_2 (HMM E-Value=0.033) 31 1.7
SB_18739| Best HMM Match : YhhN (HMM E-Value=7.3) 25 1.7
SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 2.2
SB_32451| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 2.2
SB_28644| Best HMM Match : zf-CCCH (HMM E-Value=1.5e-05) 31 2.2
SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1) 31 2.2
SB_5678| Best HMM Match : Rick_17kDa_Anti (HMM E-Value=1.3) 30 3.8
SB_15225| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.8
SB_48719| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 5.0
SB_16095| Best HMM Match : Podocalyxin (HMM E-Value=1) 30 5.0
SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.7
SB_9057| Best HMM Match : Nucleoplasmin (HMM E-Value=3.6) 24 7.6
SB_15263| Best HMM Match : Jun (HMM E-Value=1.8) 29 8.8
SB_28396| Best HMM Match : RRM_1 (HMM E-Value=0.00035) 29 8.8
>SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33)
Length = 457
Score = 38.3 bits (85), Expect = 0.014
Identities = 18/54 (33%), Positives = 19/54 (35%)
Frame = +2
Query: 1229 PPPPPPXPXXXSXRXSPPSRTXXRXXXVAPXXXPTKXPPRXHNPATPXXPPXTP 1390
PPPPPP P PP + P P PP P P PP P
Sbjct: 368 PPPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPP 421
Score = 37.9 bits (84), Expect = 0.019
Identities = 18/54 (33%), Positives = 18/54 (33%)
Frame = +2
Query: 1229 PPPPPPXPXXXSXRXSPPSRTXXRXXXVAPXXXPTKXPPRXHNPATPXXPPXTP 1390
PPPPPP P PP P P PP P P PP P
Sbjct: 367 PPPPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAP 420
Score = 37.9 bits (84), Expect = 0.019
Identities = 18/54 (33%), Positives = 19/54 (35%)
Frame = +2
Query: 1229 PPPPPPXPXXXSXRXSPPSRTXXRXXXVAPXXXPTKXPPRXHNPATPXXPPXTP 1390
PP PPP P PP + P P PP PA P PP P
Sbjct: 375 PPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPPP 428
Score = 37.9 bits (84), Expect = 0.019
Identities = 18/54 (33%), Positives = 18/54 (33%)
Frame = +2
Query: 1229 PPPPPPXPXXXSXRXSPPSRTXXRXXXVAPXXXPTKXPPRXHNPATPXXPPXTP 1390
PPPPPP P PP P P PP P P PP P
Sbjct: 379 PPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPPPPPPP 432
Score = 37.5 bits (83), Expect = 0.025
Identities = 18/51 (35%), Positives = 18/51 (35%)
Frame = +2
Query: 1229 PPPPPPXPXXXSXRXSPPSRTXXRXXXVAPXXXPTKXPPRXHNPATPXXPP 1381
PPPPPP P S PP P P PP P P PP
Sbjct: 366 PPPPPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPP 416
Score = 35.5 bits (78), Expect = 0.10
Identities = 17/54 (31%), Positives = 18/54 (33%)
Frame = +2
Query: 1229 PPPPPPXPXXXSXRXSPPSRTXXRXXXVAPXXXPTKXPPRXHNPATPXXPPXTP 1390
PPPPPP P P + P P PP P P PP P
Sbjct: 371 PPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPP 424
Score = 35.1 bits (77), Expect = 0.13
Identities = 17/53 (32%), Positives = 17/53 (32%)
Frame = +2
Query: 1232 PPPPPXPXXXSXRXSPPSRTXXRXXXVAPXXXPTKXPPRXHNPATPXXPPXTP 1390
PPPPP P PP P P PP P P PP P
Sbjct: 365 PPPPPPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPP 417
Score = 34.7 bits (76), Expect = 0.18
Identities = 17/54 (31%), Positives = 17/54 (31%)
Frame = +2
Query: 1229 PPPPPPXPXXXSXRXSPPSRTXXRXXXVAPXXXPTKXPPRXHNPATPXXPPXTP 1390
PPP PP P PP P P PP P P PP P
Sbjct: 374 PPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPP 427
>SB_6280| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 35.9 bits (79), Expect = 0.077
Identities = 35/123 (28%), Positives = 37/123 (30%)
Frame = -1
Query: 1389 GVXGGXXGVAGLXXRGGXLVGXXXGATXXXRXXVREGGEXRXEXFXGXGGGGGGRXXXXX 1210
G GG G G GG G GAT GG GGGGG
Sbjct: 245 GATGGGGGATG---GGGGATGGGGGATGGGGGATGGGGGATGGGGGATGGGGGATGGGGG 301
Query: 1209 RXVXXGXXQWXXXGRGGRVXGXEXRXXRAXGXXGGGSAGG*GXRXXXMVFXXGFXXGVGG 1030
G G G G A G GG + GG G + G G GG
Sbjct: 302 ATGGGGGATGVGGGATGGGGGATGGGVGATGGGGGATGGGGG-----VTGGGGGATGGGG 356
Query: 1029 GXG 1021
G G
Sbjct: 357 GPG 359
Score = 33.5 bits (73), Expect = 0.41
Identities = 31/119 (26%), Positives = 32/119 (26%)
Frame = -1
Query: 1377 GXXGVAGLXXRGGXLVGXXXGATXXXRXXVREGGEXRXEXFXGXGGGGGGRXXXXXRXVX 1198
G G G GG G GAT GG GGGGG
Sbjct: 239 GRLGGGGATGGGGGATGGGGGATGGGGGATGGGGGATGGGGGATGGGGGATGGGGGATGG 298
Query: 1197 XGXXQWXXXGRGGRVXGXEXRXXRAXGXXGGGSAGG*GXRXXXMVFXXGFXXGVGGGXG 1021
G G G G A G G + GG G G GGG G
Sbjct: 299 GGGATGGGGGATGVGGGATGGGGGATGGGVGATGGGGGATGGGGGVTGGGGGATGGGGG 357
>SB_1800| Best HMM Match : LEA_4 (HMM E-Value=7.4)
Length = 186
Score = 35.5 bits (78), Expect = 0.10
Identities = 29/104 (27%), Positives = 31/104 (29%), Gaps = 2/104 (1%)
Frame = -1
Query: 1389 GVXGGXXGVAG--LXXRGGXLVGXXXGATXXXRXXVREGGEXRXEXFXGXGGGGGGRXXX 1216
G GG G G GG G GAT GG + GGGGG
Sbjct: 48 GATGGGGGATGGGATGGGGGATGGGGGATGGHGGATGGGGGATGDGGGATGGGGGATGGG 107
Query: 1215 XXRXVXXGXXQWXXXGRGGRVXGXEXRXXRAXGXXGGGSAGG*G 1084
G G G G A G GG + GG G
Sbjct: 108 GGATGGHGGATGGGVGATGGHGGATGGHGGATGGHGGATGGGGG 151
Score = 30.3 bits (65), Expect = 3.8
Identities = 33/123 (26%), Positives = 34/123 (27%)
Frame = -1
Query: 1389 GVXGGXXGVAGLXXRGGXLVGXXXGATXXXRXXVREGGEXRXEXFXGXGGGGGGRXXXXX 1210
G GG G G GG G GAT GG GGGGG
Sbjct: 41 GATGGHGGATG---GGGGATGG--GATGGGGGATGGGGGATGGHGGATGGGGGATGDGGG 95
Query: 1209 RXVXXGXXQWXXXGRGGRVXGXEXRXXRAXGXXGGGSAGG*GXRXXXMVFXXGFXXGVGG 1030
G G G G A G GG + G G G GG
Sbjct: 96 ATGGGGGATGGGGGATGGHGGATGGGVGATGGHGGATGGHGGATGGHGGATGGGGGATGG 155
Query: 1029 GXG 1021
G G
Sbjct: 156 GGG 158
Score = 29.5 bits (63), Expect = 6.7
Identities = 32/109 (29%), Positives = 34/109 (31%), Gaps = 7/109 (6%)
Frame = -1
Query: 1389 GVXGGXXGVAGLXXRGGXLVGXXXGATXXXRXXVREGGEXRXEXFXGXGGGGG---GRXX 1219
G GG G G GG G GAT +GG GGGGG G
Sbjct: 60 GATGGGGGATG---GGGGATGGHGGATGGGGGATGDGGGATGGGGGATGGGGGATGGHGG 116
Query: 1218 XXXRXVXX-GXXQWXXXGRGGRVXGXEXRXXR---AXGXXGGGSAGG*G 1084
V G G GG G A G GG + GG G
Sbjct: 117 ATGGGVGATGGHGGATGGHGGATGGHGGATGGGGGATGGGGGATGGGGG 165
>SB_55818| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 145
Score = 34.7 bits (76), Expect = 0.18
Identities = 19/54 (35%), Positives = 20/54 (37%)
Frame = +2
Query: 1229 PPPPPPXPXXXSXRXSPPSRTXXRXXXVAPXXXPTKXPPRXHNPATPXXPPXTP 1390
PPPPPP P + PP P P PP PA P PP P
Sbjct: 50 PPPPPPSPPAAAPAAPPP-----------PAAAPAAPPPPAAPPAAPPPPPPLP 92
Score = 31.9 bits (69), Expect = 1.2
Identities = 17/55 (30%), Positives = 18/55 (32%), Gaps = 1/55 (1%)
Frame = +2
Query: 1229 PPPPPPXPXXXSXRXSPPSRTXXR-XXXVAPXXXPTKXPPRXHNPATPXXPPXTP 1390
PPPPP P PP+ AP P PP P P P P
Sbjct: 51 PPPPPSPPAAAPAAPPPPAAAPAAPPPPAAPPAAPPPPPPLPAPPPPPAQPAPQP 105
Score = 31.5 bits (68), Expect = 1.7
Identities = 17/53 (32%), Positives = 19/53 (35%)
Frame = +2
Query: 1232 PPPPPXPXXXSXRXSPPSRTXXRXXXVAPXXXPTKXPPRXHNPATPXXPPXTP 1390
PPPPP + +PP P P PP PA P PP P
Sbjct: 50 PPPPPPSPPAAAPAAPPPPAAAPAAPPPPAAPPAAPPPPPPLPA-PPPPPAQP 101
>SB_53582| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 393
Score = 34.7 bits (76), Expect = 0.18
Identities = 17/51 (33%), Positives = 17/51 (33%)
Frame = +2
Query: 1229 PPPPPPXPXXXSXRXSPPSRTXXRXXXVAPXXXPTKXPPRXHNPATPXXPP 1381
PPPPPP P PP T V PP P P PP
Sbjct: 102 PPPPPPPPPPPPPPPPPPPITLHHEQHVVSHVMHPAPPPPPPPPPAPCMPP 152
>SB_20869| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1212
Score = 34.3 bits (75), Expect = 0.23
Identities = 17/51 (33%), Positives = 19/51 (37%)
Frame = +2
Query: 1229 PPPPPPXPXXXSXRXSPPSRTXXRXXXVAPXXXPTKXPPRXHNPATPXXPP 1381
P PPP P +PP R P P + P NPA P PP
Sbjct: 1055 PIPPPRKPSPPPSEPAPPPRQPPPPSTSQPVPPPRQPDPIPTNPAHPTEPP 1105
Score = 30.3 bits (65), Expect = 3.8
Identities = 16/55 (29%), Positives = 18/55 (32%)
Frame = +2
Query: 1226 RPPPPPPXPXXXSXRXSPPSRTXXRXXXVAPXXXPTKXPPRXHNPATPXXPPXTP 1390
+P PP S + PP R P P K P PA P P P
Sbjct: 1025 QPVPPKRKASPPSAQPLPPPRKPSPPPSAVPIPPPRKPSPPPSEPAPPPRQPPPP 1079
>SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 158
Score = 33.9 bits (74), Expect = 0.31
Identities = 16/54 (29%), Positives = 20/54 (37%)
Frame = +2
Query: 1229 PPPPPPXPXXXSXRXSPPSRTXXRXXXVAPXXXPTKXPPRXHNPATPXXPPXTP 1390
P P P P + + P+ + A PTK P H P TP TP
Sbjct: 69 PTPATPTPTTPTPKTPTPTTSTLTKPTPATTPTPTKPTPTAHTPTTPTPTAHTP 122
>SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 290
Score = 33.1 bits (72), Expect = 0.54
Identities = 19/55 (34%), Positives = 21/55 (38%)
Frame = +2
Query: 1229 PPPPPPXPXXXSXRXSPPSRTXXRXXXVAPXXXPTKXPPRXHNPATPXXPPXTPR 1393
PPP PP P + PP AP P PP NP P PP P+
Sbjct: 189 PPPNPPYPPPPNAPNPPPPNPPYPPPPNAP-NPPYPPPPNAPNP--PYPPPPNPQ 240
Score = 31.9 bits (69), Expect = 1.2
Identities = 17/53 (32%), Positives = 18/53 (33%)
Frame = +2
Query: 1232 PPPPPXPXXXSXRXSPPSRTXXRXXXVAPXXXPTKXPPRXHNPATPXXPPXTP 1390
PPPP P + PP P P PP NP P PP P
Sbjct: 162 PPPPNPPPPNAPYPPPPYPPPPNPPYPPPPNPPYPPPPNAPNP-PPPNPPYPP 213
Score = 31.1 bits (67), Expect = 2.2
Identities = 16/53 (30%), Positives = 18/53 (33%)
Frame = +2
Query: 1232 PPPPPXPXXXSXRXSPPSRTXXRXXXVAPXXXPTKXPPRXHNPATPXXPPXTP 1390
PPPPP P + PP P P P +P P PP P
Sbjct: 103 PPPPPYPPPPNPPYPPPPNAPY-PPPPNPPYPPPPNAPYPPSPNAPYPPPPNP 154
Score = 31.1 bits (67), Expect = 2.2
Identities = 17/52 (32%), Positives = 18/52 (34%), Gaps = 1/52 (1%)
Frame = +2
Query: 1229 PPPPPPXPXXXSXRXSPPSRTXXRXXXVAPXXXPTKXP-PRXHNPATPXXPP 1381
P PPPP P + PP AP P P P N P PP
Sbjct: 173 PYPPPPYPPPPNPPYPPPPNPPYPPPPNAPNPPPPNPPYPPPPNAPNPPYPP 224
Score = 30.7 bits (66), Expect = 2.9
Identities = 18/54 (33%), Positives = 19/54 (35%)
Frame = +2
Query: 1229 PPPPPPXPXXXSXRXSPPSRTXXRXXXVAPXXXPTKXPPRXHNPATPXXPPXTP 1390
PPP PP P + PP P P PP NP P PP P
Sbjct: 181 PPPNPPYPPPPNPPYPPPPNA----PNPPPPNPPYPPPPNAPNPPYP-PPPNAP 229
Score = 30.3 bits (65), Expect = 3.8
Identities = 15/50 (30%), Positives = 16/50 (32%)
Frame = +2
Query: 1232 PPPPPXPXXXSXRXSPPSRTXXRXXXVAPXXXPTKXPPRXHNPATPXXPP 1381
PPPP P PP+ P P PP P P PP
Sbjct: 149 PPPPNPPYPPPLYPPPPNPPPPNAPYPPPPYPPPPNPPYPPPPNPPYPPP 198
Score = 29.9 bits (64), Expect = 5.0
Identities = 16/54 (29%), Positives = 17/54 (31%)
Frame = +2
Query: 1229 PPPPPPXPXXXSXRXSPPSRTXXRXXXVAPXXXPTKXPPRXHNPATPXXPPXTP 1390
PPP P P + PP P P PP P P PP P
Sbjct: 134 PPPNAPYPPSPNAPYPPPPNPPYPPPLYPP--PPNPPPPNAPYPPPPYPPPPNP 185
Score = 29.5 bits (63), Expect = 6.7
Identities = 15/51 (29%), Positives = 15/51 (29%)
Frame = +2
Query: 1229 PPPPPPXPXXXSXRXSPPSRTXXRXXXVAPXXXPTKXPPRXHNPATPXXPP 1381
P PPPP P PP P P P P P PP
Sbjct: 147 PYPPPPNPPYPPPLYPPPPNPPPPNAPYPPPPYPPPPNPPYPPPPNPPYPP 197
>SB_51674| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 833
Score = 32.7 bits (71), Expect = 0.72
Identities = 15/51 (29%), Positives = 19/51 (37%)
Frame = +2
Query: 1229 PPPPPPXPXXXSXRXSPPSRTXXRXXXVAPXXXPTKXPPRXHNPATPXXPP 1381
PPPPPP + R P + P P P + P+ P PP
Sbjct: 777 PPPPPPPTKPATPRVPPNIPSRPPGARPTPPPPPPGKPTKPTKPSLPPVPP 827
>SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05)
Length = 480
Score = 32.7 bits (71), Expect = 0.72
Identities = 16/50 (32%), Positives = 18/50 (36%)
Frame = +2
Query: 1232 PPPPPXPXXXSXRXSPPSRTXXRXXXVAPXXXPTKXPPRXHNPATPXXPP 1381
PPPPP S R P T AP + PP P + PP
Sbjct: 215 PPPPPPGRGPSQRSLAPPPTGSSRPLPAPPPGENRPPPPMRGPTSGGEPP 264
Score = 29.9 bits (64), Expect = 5.0
Identities = 17/54 (31%), Positives = 19/54 (35%)
Frame = +2
Query: 1232 PPPPPXPXXXSXRXSPPSRTXXRXXXVAPXXXPTKXPPRXHNPATPXXPPXTPR 1393
PPPPP PP R +AP P PP A P P P+
Sbjct: 318 PPPPPPSRDQVPLPPPPLR-----GQIAPPPPPISKPPTSTRSAPPPPPGRAPQ 366
>SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013)
Length = 392
Score = 32.7 bits (71), Expect = 0.72
Identities = 16/50 (32%), Positives = 18/50 (36%)
Frame = +2
Query: 1232 PPPPPXPXXXSXRXSPPSRTXXRXXXVAPXXXPTKXPPRXHNPATPXXPP 1381
PPPPP S R P T AP + PP P + PP
Sbjct: 127 PPPPPPGRGPSQRSLAPPPTGSSRPLPAPPPGENRPPPPMRGPTSGGEPP 176
Score = 29.9 bits (64), Expect = 5.0
Identities = 17/54 (31%), Positives = 19/54 (35%)
Frame = +2
Query: 1232 PPPPPXPXXXSXRXSPPSRTXXRXXXVAPXXXPTKXPPRXHNPATPXXPPXTPR 1393
PPPPP PP R +AP P PP A P P P+
Sbjct: 230 PPPPPPSRDQVPLPPPPLR-----GQIAPPPPPISKPPTSTRSAPPPPPGRAPQ 278
>SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10)
Length = 514
Score = 32.3 bits (70), Expect = 0.95
Identities = 19/54 (35%), Positives = 20/54 (37%), Gaps = 2/54 (3%)
Frame = +2
Query: 1235 PPPPXPXXXSXRXSPPSR--TXXRXXXVAPXXXPTKXPPRXHNPATPXXPPXTP 1390
PPPP P S R PPSR +AP PP P PP P
Sbjct: 326 PPPPPPSRSSQRPPPPSRGAPPPPSMGMAPPPVGGAAPPPPPPPPVGGPPPPPP 379
>SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 32.3 bits (70), Expect = 0.95
Identities = 18/58 (31%), Positives = 20/58 (34%), Gaps = 4/58 (6%)
Frame = +2
Query: 1229 PPPP----PPXPXXXSXRXSPPSRTXXRXXXVAPXXXPTKXPPRXHNPATPXXPPXTP 1390
PPPP PP P + PP T P P PP + P P P P
Sbjct: 357 PPPPTNNTPPPPPPTNKPPPPPPPTNGPPPPPPPTNGPPPPPPPTNGPPPPPPPTNGP 414
Score = 30.3 bits (65), Expect = 3.8
Identities = 17/53 (32%), Positives = 19/53 (35%)
Frame = +2
Query: 1232 PPPPPXPXXXSXRXSPPSRTXXRXXXVAPXXXPTKXPPRXHNPATPXXPPXTP 1390
PPPPP + SPP T P P PP + P P P P
Sbjct: 346 PPPPPT----NNPPSPPPPTNNTPPPPPPTNKPPPPPPPTNGPPPPPPPTNGP 394
Score = 30.3 bits (65), Expect = 3.8
Identities = 17/57 (29%), Positives = 19/57 (33%), Gaps = 3/57 (5%)
Frame = +2
Query: 1229 PPP---PPPXPXXXSXRXSPPSRTXXRXXXVAPXXXPTKXPPRXHNPATPXXPPXTP 1390
PPP PP P + PP T P P PP + P P P P
Sbjct: 348 PPPTNNPPSPPPPTNNTPPPPPPTNKPPPPPPPTNGPPPPPPPTNGPPPPPPPTNGP 404
>SB_48634| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1066
Score = 26.6 bits (56), Expect(2) = 1.2
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +2
Query: 1229 PPPPPPXPXXXSXRXSPP 1282
PPPPPP P S S P
Sbjct: 876 PPPPPPPPPPASSTGSTP 893
Score = 23.8 bits (49), Expect(2) = 1.2
Identities = 9/20 (45%), Positives = 9/20 (45%)
Frame = +2
Query: 1193 PXXTXRXXXXXRPPPPPPXP 1252
P R PPPPPP P
Sbjct: 860 PRPRPRRPPPPPPPPPPPPP 879
>SB_52222| Best HMM Match : SAPS (HMM E-Value=2.1e-37)
Length = 1063
Score = 31.9 bits (69), Expect = 1.2
Identities = 28/100 (28%), Positives = 29/100 (29%)
Frame = -1
Query: 1389 GVXGGXXGVAGLXXRGGXLVGXXXGATXXXRXXVREGGEXRXEXFXGXGGGGGGRXXXXX 1210
G GG G G GG G G +GG G GG GGG
Sbjct: 776 GGDGGGGGDGGGGGGGGGGGGGGGGGGDGGGYGDGDGGGGGGGGGGGGGGDGGGYGDGGG 835
Query: 1209 RXVXXGXXQWXXXGRGGRVXGXEXRXXRAXGXXGGGSAGG 1090
G G GG G G GGG GG
Sbjct: 836 FGDGGGYADGDGGGGGGGGGGGGGGGGGGGGGGGGGGGGG 875
Score = 30.3 bits (65), Expect = 3.8
Identities = 22/73 (30%), Positives = 24/73 (32%)
Frame = -1
Query: 1245 GGGGGGRXXXXXRXVXXGXXQWXXXGRGGRVXGXEXRXXRAXGXXGGGSAGG*GXRXXXM 1066
GGGGGG G G GG G + GGG GG G
Sbjct: 769 GGGGGGDGGDGGGGGDGGGGGGGGGGGGGGGGGGDGGGYGDGDGGGGGGGGGGGGGGDGG 828
Query: 1065 VFXXGFXXGVGGG 1027
+ G G GGG
Sbjct: 829 GYGDGGGFGDGGG 841
Score = 29.9 bits (64), Expect = 5.0
Identities = 27/87 (31%), Positives = 29/87 (33%)
Frame = -1
Query: 1281 GGEXRXEXFXGXGGGGGGRXXXXXRXVXXGXXQWXXXGRGGRVXGXEXRXXRAXGXXGGG 1102
GG+ G GGGGGG G G GG G G GGG
Sbjct: 773 GGDGGDGGGGGDGGGGGGGGGGGGGGGGGGDGGGYGDGDGGGGGG-------GGGGGGGG 825
Query: 1101 SAGG*GXRXXXMVFXXGFXXGVGGGXG 1021
GG G G+ G GGG G
Sbjct: 826 DGGGYGD-GGGFGDGGGYADGDGGGGG 851
>SB_33909| Best HMM Match : FH2 (HMM E-Value=0)
Length = 1063
Score = 31.9 bits (69), Expect = 1.2
Identities = 16/54 (29%), Positives = 17/54 (31%)
Frame = +2
Query: 1229 PPPPPPXPXXXSXRXSPPSRTXXRXXXVAPXXXPTKXPPRXHNPATPXXPPXTP 1390
PPPPPP P S P + P PP P PP P
Sbjct: 677 PPPPPPLPVIEGSSLSVPPPPPPPPPPLLSGTLPMPPPPPPPPPGCAGLPPPPP 730
>SB_26646| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 152
Score = 31.9 bits (69), Expect = 1.2
Identities = 24/77 (31%), Positives = 25/77 (32%)
Frame = -1
Query: 1251 GXGGGGGGRXXXXXRXVXXGXXQWXXXGRGGRVXGXEXRXXRAXGXXGGGSAGG*GXRXX 1072
G GGGGG V G GG G G GG+AG G
Sbjct: 37 GGVGGGGGNGGGAGNGVGAGGCGCGGGNDGGNGGGGAGNGGGGGGAGNGGAAGAAGAGAG 96
Query: 1071 XMVFXXGFXXGVGGGXG 1021
V G GVGG G
Sbjct: 97 GNV-GGGGSGGVGGNGG 112
>SB_11420| Best HMM Match : MBOAT (HMM E-Value=6.9e-06)
Length = 628
Score = 25.8 bits (54), Expect(2) = 1.6
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +2
Query: 1229 PPPPPPXPXXXSXRXSPPSRT 1291
PPPPPP P + R P+ T
Sbjct: 216 PPPPPPPPPMLARRWYYPAFT 236
Score = 24.2 bits (50), Expect(2) = 1.6
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +2
Query: 1226 RPPPPPPXP 1252
+PPPPPP P
Sbjct: 210 KPPPPPPPP 218
>SB_2292| Best HMM Match : Extensin_2 (HMM E-Value=0.033)
Length = 867
Score = 31.5 bits (68), Expect = 1.7
Identities = 18/51 (35%), Positives = 19/51 (37%)
Frame = +2
Query: 1229 PPPPPPXPXXXSXRXSPPSRTXXRXXXVAPXXXPTKXPPRXHNPATPXXPP 1381
PPPPP P PPS + R P P PPR P PP
Sbjct: 205 PPPPPRPPPSPPPPPPPPSPSPPR-----PPPPPPPSPPRPLAAKLPEPPP 250
Score = 31.1 bits (67), Expect = 2.2
Identities = 19/53 (35%), Positives = 20/53 (37%)
Frame = +2
Query: 1229 PPPPPPXPXXXSXRXSPPSRTXXRXXXVAPXXXPTKXPPRXHNPATPXXPPXT 1387
PPPPPP P R PP A P PP + P P PP T
Sbjct: 215 PPPPPPPPSPSPPRPPPPPPPSPPRPLAAKLPEP---PPIPNMP--PTLPPPT 262
>SB_18739| Best HMM Match : YhhN (HMM E-Value=7.3)
Length = 306
Score = 25.4 bits (53), Expect(2) = 1.7
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +2
Query: 1226 RPPPPPPXP 1252
RPPPPPP P
Sbjct: 251 RPPPPPPPP 259
Score = 24.6 bits (51), Expect(2) = 1.7
Identities = 9/21 (42%), Positives = 10/21 (47%)
Frame = +2
Query: 1229 PPPPPPXPXXXSXRXSPPSRT 1291
PPPPPP P + P T
Sbjct: 254 PPPPPPPPSDYNVSVGPHDLT 274
>SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2870
Score = 31.1 bits (67), Expect = 2.2
Identities = 16/54 (29%), Positives = 20/54 (37%)
Frame = +2
Query: 1229 PPPPPPXPXXXSXRXSPPSRTXXRXXXVAPXXXPTKXPPRXHNPATPXXPPXTP 1390
PP PPP P + R + P+ + P P PAT PP P
Sbjct: 920 PPLPPPPPPIQTTRPTVPTTPTTQASTTRPTPPPPTSALPPPIPATQVPPPPLP 973
>SB_32451| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 924
Score = 31.1 bits (67), Expect = 2.2
Identities = 23/67 (34%), Positives = 24/67 (35%), Gaps = 1/67 (1%)
Frame = -1
Query: 1281 GGEXRXEXFXGXGGGGGGRXXXXXRXVXXGXXQWXXXG-RGGRVXGXEXRXXRAXGXXGG 1105
GG + G GGGG G R G G RGG G R G GG
Sbjct: 721 GGWQKDYQRGGRGGGGYGGGYNDRRMQQGGYGNRSGGGYRGGGGYGGGGGGYRGGGGYGG 780
Query: 1104 GSAGG*G 1084
G GG G
Sbjct: 781 GHRGGGG 787
>SB_28644| Best HMM Match : zf-CCCH (HMM E-Value=1.5e-05)
Length = 267
Score = 31.1 bits (67), Expect = 2.2
Identities = 21/56 (37%), Positives = 22/56 (39%)
Frame = -1
Query: 1170 GRGGRVXGXEXRXXRAXGXXGGGSAGG*GXRXXXMVFXXGFXXGVGGGXG*XSPPA 1003
GRGG G G GGG GG G GF G GGG G + PA
Sbjct: 82 GRGGGFGGGGGFGGGGGGGFGGGGGGGFGGGGGG---GGGFGGGGGGGFGSRARPA 134
>SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1)
Length = 305
Score = 31.1 bits (67), Expect = 2.2
Identities = 20/60 (33%), Positives = 20/60 (33%), Gaps = 6/60 (10%)
Frame = +2
Query: 1229 PPPPPPXPXXXSXRXSPPSRTXXRXXXVAPXXXPT------KXPPRXHNPATPXXPPXTP 1390
PPPPP P S SPP P P PP PAT PP P
Sbjct: 110 PPPPPRAPETPSQAPSPPPPPTSPATRAPPPPPPIAPATGGPPPPPPIAPATGGPPPPPP 169
Score = 31.1 bits (67), Expect = 2.2
Identities = 16/54 (29%), Positives = 16/54 (29%)
Frame = +2
Query: 1229 PPPPPPXPXXXSXRXSPPSRTXXRXXXVAPXXXPTKXPPRXHNPATPXXPPXTP 1390
PPPPP P PP A PP P P PP P
Sbjct: 152 PPPPPIAPATGGPPPPPPIAPAATVPAPAVPLAAASPPPPSGGPPPPPPPPPPP 205
>SB_5678| Best HMM Match : Rick_17kDa_Anti (HMM E-Value=1.3)
Length = 292
Score = 30.3 bits (65), Expect = 3.8
Identities = 32/122 (26%), Positives = 41/122 (33%), Gaps = 2/122 (1%)
Frame = -1
Query: 1386 VXGGXXGVAGLXXRGGXLVGXXX-GATXXXRXXVREGGEXRXEXFXGXGGG-GGGRXXXX 1213
+ GG G+ G GG + G G + GG GGG GGG
Sbjct: 127 IEGGEGGMGGGMSMGGGMGGGMSMGGMGGGMGGMMGGGSMGGGMMSMAGGGMGGGMGGGM 186
Query: 1212 XRXVXXGXXQWXXXGRGGRVXGXEXRXXRAXGXXGGGSAGG*GXRXXXMVFXXGFXXGVG 1033
+ G GG + G + G GGG GG G + G G+G
Sbjct: 187 GGGMEGGMG-------GGMMEGMQGMGSMGGGMMGGGMGGGMGFNG---MEDGGKEGGMG 236
Query: 1032 GG 1027
GG
Sbjct: 237 GG 238
>SB_15225| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 246
Score = 30.3 bits (65), Expect = 3.8
Identities = 31/118 (26%), Positives = 36/118 (30%), Gaps = 1/118 (0%)
Frame = -1
Query: 1377 GXXGVAGLXXRGGXLVGXXXGATXXXRXXVREGG-EXRXEXFXGXGGGGGGRXXXXXRXV 1201
G G+AG GG + G G + GG G G G G +
Sbjct: 54 GRGGMAGEGMGGGGMAGEGMGRGGMAGEGMGGGGMAGEGMGRGGIAGEGMGGGGMAGEGM 113
Query: 1200 XXGXXQWXXXGRGGRVXGXEXRXXRAXGXXGGGSAGG*GXRXXXMVFXXGFXXGVGGG 1027
G GRGG R A GGG G G M G+GGG
Sbjct: 114 SRGGIAGEGMGRGGMAGEGMGRGGMAGEGMGGGGMAGEGMGGGGMA-----GEGMGGG 166
>SB_48719| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1880
Score = 29.9 bits (64), Expect = 5.0
Identities = 18/56 (32%), Positives = 19/56 (33%)
Frame = -1
Query: 1251 GXGGGGGGRXXXXXRXVXXGXXQWXXXGRGGRVXGXEXRXXRAXGXXGGGSAGG*G 1084
G GG GR G + GRGG G R G GG GG G
Sbjct: 127 GGRGGWRGRGGGEGNGAGGGIGRGGGRGRGGGEGGWGGRGGNGGGRGGGEGGGGRG 182
Score = 29.5 bits (63), Expect = 6.7
Identities = 28/90 (31%), Positives = 28/90 (31%), Gaps = 4/90 (4%)
Frame = -1
Query: 1278 GEXRXEXFXGXGGGG---GGRXXXXXRXVXXGXXQWXXXGRGG-RVXGXEXRXXRAXGXX 1111
G R G GG GGR R G GRGG R G G
Sbjct: 109 GAKRENGMEGWRRGGVQRGGRGGWRGRGGGEGNGAGGGIGRGGGRGRGGGEGGWGGRGGN 168
Query: 1110 GGGSAGG*GXRXXXMVFXXGFXXGVGGGXG 1021
GGG GG G G G G G G
Sbjct: 169 GGGRGGGEGGGGRGRGTGGGSRGGGGDGRG 198
>SB_16095| Best HMM Match : Podocalyxin (HMM E-Value=1)
Length = 768
Score = 29.9 bits (64), Expect = 5.0
Identities = 17/51 (33%), Positives = 18/51 (35%)
Frame = +2
Query: 1229 PPPPPPXPXXXSXRXSPPSRTXXRXXXVAPXXXPTKXPPRXHNPATPXXPP 1381
PPPPPP P +PP AP PP A P PP
Sbjct: 660 PPPPPPPPPGGQAGGAPPPPPPPLPGGAAP-----PPPPPIGGGAPPPPPP 705
>SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1597
Score = 29.5 bits (63), Expect = 6.7
Identities = 19/53 (35%), Positives = 19/53 (35%), Gaps = 2/53 (3%)
Frame = +2
Query: 1229 PPPPPPXPXXXSXRXSPPSRTXXRXXXVAPXXXPTKXP--PRXHNPATPXXPP 1381
PPPPPP P S PP T AP P P NP PP
Sbjct: 693 PPPPPPPPPQPSTPPPPPPSTPPVQQSGAP-GSPAGSPSGTSAGNPQQQPPPP 744
>SB_9057| Best HMM Match : Nucleoplasmin (HMM E-Value=3.6)
Length = 479
Score = 23.8 bits (49), Expect(2) = 7.6
Identities = 9/20 (45%), Positives = 9/20 (45%)
Frame = +2
Query: 1193 PXXTXRXXXXXRPPPPPPXP 1252
P R PPPPPP P
Sbjct: 413 PNRRRRRSLVQPPPPPPPAP 432
Score = 23.8 bits (49), Expect(2) = 7.6
Identities = 8/17 (47%), Positives = 9/17 (52%)
Frame = +2
Query: 1229 PPPPPPXPXXXSXRXSP 1279
PPPPPP P + P
Sbjct: 434 PPPPPPPPQPTTALPDP 450
>SB_15263| Best HMM Match : Jun (HMM E-Value=1.8)
Length = 315
Score = 29.1 bits (62), Expect = 8.8
Identities = 18/52 (34%), Positives = 18/52 (34%), Gaps = 1/52 (1%)
Frame = +2
Query: 1238 PPPXPXXXSXRXSPPSRTXXRXXXVAPXXXPTKXPPRXHNPATPXXP-PXTP 1390
PPP P R PP P P PPR P P P P TP
Sbjct: 181 PPPIPPIDPPRTQPPPIPPIDPPRTQPPPIPPIDPPRTQPP--PIFPQPTTP 230
>SB_28396| Best HMM Match : RRM_1 (HMM E-Value=0.00035)
Length = 258
Score = 29.1 bits (62), Expect = 8.8
Identities = 29/88 (32%), Positives = 32/88 (36%), Gaps = 1/88 (1%)
Frame = -1
Query: 1281 GGEXRXEXFXGXGGGGGG-RXXXXXRXVXXGXXQWXXXGRGGRVXGXEXRXXRAXGXXGG 1105
GG R + G GGGGG R R G + G G R G G GG
Sbjct: 124 GGGRRGGGYGGGRGGGGGYRSGGGYR----GGGGYRGGGGGYRGRGRGGGGYGGGGYGGG 179
Query: 1104 GSAGG*GXRXXXMVFXXGFXXGVGGGXG 1021
G GG G + G G GGG G
Sbjct: 180 GYGGG-GHGGGG--YGGGGYGGGGGGYG 204
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,134,211
Number of Sequences: 59808
Number of extensions: 177854
Number of successful extensions: 3186
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 674
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1740
length of database: 16,821,457
effective HSP length: 85
effective length of database: 11,737,777
effective search space used: 4448617483
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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