Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_P22
         (926 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_1380 + 29747187-29747267,29747349-29747481,29747758-297477...    29   6.9  

>06_03_1380 +
           29747187-29747267,29747349-29747481,29747758-29747770,
           29748027-29748118,29749011-29749831,29750375-29750677
          Length = 480

 Score = 28.7 bits (61), Expect = 6.9
 Identities = 12/25 (48%), Positives = 14/25 (56%)
 Frame = +3

Query: 438 ELWRLFAVVVRMLGXVGXWPLKIVT 512
           ELWRL     +  G +G WP K VT
Sbjct: 319 ELWRLIDQQGKAPGVIGWWPAKAVT 343


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,005,538
Number of Sequences: 37544
Number of extensions: 165407
Number of successful extensions: 970
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 506
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 864
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2647531240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)