Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_P21
         (914 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_06_0088 - 25453249-25453282,25453369-25453461,25454111-254541...    33   0.42 

>05_06_0088 -
           25453249-25453282,25453369-25453461,25454111-25454199,
           25454603-25454665,25454935-25455024,25455204-25455264,
           25455499-25455593,25455861-25455950,25456136-25456222,
           25456992-25457303
          Length = 337

 Score = 32.7 bits (71), Expect = 0.42
 Identities = 19/42 (45%), Positives = 27/42 (64%), Gaps = 2/42 (4%)
 Frame = +3

Query: 480 KTIAVNVSPEKTXQILT-SGSEN-EIYVNCVQAQCXPMTCSK 599
           KT+  NV+     +ILT S  EN E+YV+ VQA   P+TC++
Sbjct: 221 KTLRENVALSSFFKILTTSPDENGEVYVSTVQANKYPITCTQ 262


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,270,552
Number of Sequences: 37544
Number of extensions: 284203
Number of successful extensions: 484
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 449
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 484
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2600672280
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)