Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_P20
         (921 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g52310.1 68414.m05902 protein kinase family protein / C-type ...    42   6e-04
At3g14720.1 68416.m01861 mitogen-activated protein kinase, putat...    30   1.9  
At5g15150.1 68418.m01775 homeobox-leucine zipper protein 7 (HAT7...    28   7.6  
At5g02330.1 68418.m00156 DC1 domain-containing protein contains ...    28   7.6  

>At1g52310.1 68414.m05902 protein kinase family protein / C-type
           lectin domain-containing protein contains protein kinase
           domain, Pfam:PF00069, PF00059 Lectin C-type domain
          Length = 552

 Score = 41.9 bits (94), Expect = 6e-04
 Identities = 22/92 (23%), Positives = 44/92 (47%)
 Frame = +2

Query: 440 NCILMYPDGNFADVNCTDTFQYVCYKKKTSTVAMSSCGSVDSEYTLSKQTGNCYKFHKVP 619
           +C+ +    +   ++C  T     +KK++ TV   SC     ++ +      CY + K  
Sbjct: 17  SCLALLCLASLDTISCESTQNATDFKKRSQTV---SC---PPDWIIGPNQTKCYAYFKNS 70

Query: 620 RTWSRAYMTCLAEGGYLTIINSQQEATFLKXL 715
            +W ++ M C   GG+L  + S +E +F++ L
Sbjct: 71  TSWEKSEMFCRTYGGHLASLASSKELSFVQKL 102


>At3g14720.1 68416.m01861 mitogen-activated protein kinase, putative
           / MAPK, putative (MPK19) identical to mitogen-activated
           protein kinase (MAPK)(AtMPK19), PMID:12119167;
          Length = 586

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 25/84 (29%), Positives = 36/84 (42%), Gaps = 3/84 (3%)
 Frame = +2

Query: 332 HALFSXGXFRSIEGVPLAKIPHDWADYEPDNAGGDENCILMYPDGNFADVNCTDTFQYVC 511
           H  F     R+++ +  A + H   D +P N   + NC L   D   A V+  DT   V 
Sbjct: 116 HQFFLYQMLRALKYMHTANVYH--RDLKPKNILANANCKLKVCDFGLARVSFNDTPTTVF 173

Query: 512 YKKKTST---VAMSSCGSVDSEYT 574
           +    +T    A   CGS  S+YT
Sbjct: 174 WTDYVATRWYRAPELCGSFCSKYT 197


>At5g15150.1 68418.m01775 homeobox-leucine zipper protein 7 (HAT7) /
           HD-ZIP protein 7 / HD-ZIP protein (HB-3) identical to
           homeobox-leucine zipper protein HAT7 (HD-ZIP protein 7)
           (HD-ZIP protein ATHB-3) (SP:Q00466) [Arabidopsis
           thaliana]
          Length = 314

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 20/86 (23%), Positives = 35/86 (40%)
 Frame = +2

Query: 383 AKIPHDWADYEPDNAGGDENCILMYPDGNFADVNCTDTFQYVCYKKKTSTVAMSSCGSVD 562
           AKI  ++A+    N G  EN      + N +D N     + +      S  A ++   +D
Sbjct: 216 AKIKREFAEASWSNNGSTEN----NHNNNSSDANHVSMIKDLFPSSIRSATATTTSTHID 271

Query: 563 SEYTLSKQTGNCYKFHKVPRTWSRAY 640
            +    +  G C  F+ +  T S +Y
Sbjct: 272 HQIVQDQDQGFCNMFNGIDETTSASY 297


>At5g02330.1 68418.m00156 DC1 domain-containing protein contains
           Pfam profile PF03107: DC1 domain
          Length = 656

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 16/53 (30%), Positives = 21/53 (39%)
 Frame = -2

Query: 563 CLHCHRKT*QQLKSFSYSKRTGTYQCN*HRRSFHQDTSGYNFRHLQHYLVHNR 405
           C H HR       SF+ S  +G + C   R+    +   Y      HY VH R
Sbjct: 289 CRHQHRI------SFTSSLPSGKWSCGVCRKKVDNNCGAYTCNKCSHYFVHTR 335


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,768,513
Number of Sequences: 28952
Number of extensions: 264644
Number of successful extensions: 514
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 509
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 514
length of database: 12,070,560
effective HSP length: 81
effective length of database: 9,725,448
effective search space used: 2188225800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)