Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_P18
         (889 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_0235 - 1964981-1964997,1965545-1966325                           30   2.1  
07_03_1369 + 26087947-26088039,26088396-26089073                       29   3.7  
08_01_0490 + 4284192-4284740                                           29   4.9  
04_01_0610 - 7997406-7998047,7998379-7998426,8000719-8001143,800...    29   4.9  
09_02_0317 + 7186148-7186243,7186406-7186572,7186766-7186878,718...    29   6.5  
06_01_1057 + 8441881-8442278,8442464-8442548,8442637-8442867           28   8.6  

>01_01_0235 - 1964981-1964997,1965545-1966325
          Length = 265

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
 Frame = +3

Query: 207 TEVCLGCICQAISGCKQG-LQCEGETCGLFRITWGYWADAGKPTINGLSPDAP-DAYSSC 380
           T +CL  +   +  C +   +CE  TCG   + + +W   G P  N  +  +P  A +SC
Sbjct: 4   TLLCLPLLASLLLLCHRARAECEPATCGNLTVRYPFW--LGGPNFNQSNQSSPSSALASC 61


>07_03_1369 + 26087947-26088039,26088396-26089073
          Length = 256

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 16/43 (37%), Positives = 21/43 (48%)
 Frame = +3

Query: 123 MASAVIRFCALLLVAGVCFADVSELPPVTEVCLGCICQAISGC 251
           M  AV+   ALLL AGV  AD  +   + +   G  C   +GC
Sbjct: 1   MKLAVVAVAALLLAAGVASADEFDFFYLVQQWPGSFCDTQAGC 43


>08_01_0490 + 4284192-4284740
          Length = 182

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 12/21 (57%), Positives = 12/21 (57%)
 Frame = -2

Query: 222 RDTPPSQGGVPKHRRNRLRQP 160
           RD PP  GG P H    LRQP
Sbjct: 40  RDAPPETGGGPHHNAILLRQP 60


>04_01_0610 -
           7997406-7998047,7998379-7998426,8000719-8001143,
           8002301-8002589
          Length = 467

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 20/61 (32%), Positives = 30/61 (49%)
 Frame = -1

Query: 307 PHVMRKRPHVSPSHCRPCLHPEIAWQMQPRHTSVTGGSSETSAKQTPATNSNAQNLITAE 128
           PH  R R   SP+H RP LH  +     PR T  TG ++ T  ++    N  ++ L+ + 
Sbjct: 412 PHTPRPRSPHSPTHPRPRLHHPL-----PRPTR-TGVANVTDDRRGEECNGGSRPLLPSR 465

Query: 127 A 125
           A
Sbjct: 466 A 466


>09_02_0317 +
           7186148-7186243,7186406-7186572,7186766-7186878,
           7187059-7187133,7187215-7187328,7187545-7187612,
           7187690-7187773,7187966-7188019,7188104-7188184,
           7188279-7188372,7188501-7188574,7188656-7188766,
           7188976-7189032,7189119-7189223,7189584-7189687,
           7190021-7190186,7190279-7190416
          Length = 566

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 13/37 (35%), Positives = 18/37 (48%)
 Frame = +3

Query: 330 PTINGLSPDAPDAYSSCTVDPYCAAQTVQNYMRRFGQ 440
           P + G +       S+ T+DP CA   VQ +   FGQ
Sbjct: 29  PCLEGKAIRVEFGDSTTTIDPTCANMVVQEFPNTFGQ 65


>06_01_1057 + 8441881-8442278,8442464-8442548,8442637-8442867
          Length = 237

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
 Frame = -1

Query: 265 CRPCLHPEIAWQMQPRHTSVTGGSSETSAK-QTPATNSNAQNLITAEAIAS 116
           CR  L P + ++++PR  + T  S+  SA  +  ATN+   +L +A   AS
Sbjct: 66  CRRHLQPCLRFRLRPRQPAATYTSTSASASPRLLATNTTEASLTSATDCAS 116


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,420,163
Number of Sequences: 37544
Number of extensions: 461219
Number of successful extensions: 1249
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1211
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1248
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2495239620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)