Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_P18
         (889 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC069570-1|AAH69570.1|  456|Homo sapiens chromosome 6 open readi...    31   7.4  
BC069567-1|AAH69567.1|  307|Homo sapiens C6orf192 protein protein.     31   7.4  
AL137783-1|CAI19370.1|  456|Homo sapiens protein ( Human DNA seq...    31   7.4  
AL032821-1|CAI95705.1|  456|Homo sapiens protein ( Human DNA seq...    31   7.4  
AK123191-1|BAC85553.1|  221|Homo sapiens protein ( Homo sapiens ...    30   9.8  

>BC069570-1|AAH69570.1|  456|Homo sapiens chromosome 6 open reading
           frame 192 protein.
          Length = 456

 Score = 30.7 bits (66), Expect = 7.4
 Identities = 22/64 (34%), Positives = 31/64 (48%)
 Frame = +3

Query: 153 LLLVAGVCFADVSELPPVTEVCLGCICQAISGCKQGLQCEGETCGLFRITWGYWADAGKP 332
           L+LV     A +S +P   E+ L C  +  +G ++GL   G   GLF   W   A  G P
Sbjct: 337 LILVVSGLSAGMSIIPTFPEI-LSCAHE--NGFEEGLSTLGLVSGLFSAMWSIGAFMG-P 392

Query: 333 TING 344
           T+ G
Sbjct: 393 TLGG 396


>BC069567-1|AAH69567.1|  307|Homo sapiens C6orf192 protein protein.
          Length = 307

 Score = 30.7 bits (66), Expect = 7.4
 Identities = 22/64 (34%), Positives = 31/64 (48%)
 Frame = +3

Query: 153 LLLVAGVCFADVSELPPVTEVCLGCICQAISGCKQGLQCEGETCGLFRITWGYWADAGKP 332
           L+LV     A +S +P   E+ L C  +  +G ++GL   G   GLF   W   A  G P
Sbjct: 188 LILVVSGLSAGMSIIPTFPEI-LSCAHE--NGFEEGLSTLGLVSGLFSAMWSIGAFMG-P 243

Query: 333 TING 344
           T+ G
Sbjct: 244 TLGG 247


>AL137783-1|CAI19370.1|  456|Homo sapiens protein ( Human DNA
           sequence from clone RP5-1181K21 on chromosome 6 Contains
            the 5' end of the gene for a novel protein, the RPS12
           gene for  ).
          Length = 456

 Score = 30.7 bits (66), Expect = 7.4
 Identities = 22/64 (34%), Positives = 31/64 (48%)
 Frame = +3

Query: 153 LLLVAGVCFADVSELPPVTEVCLGCICQAISGCKQGLQCEGETCGLFRITWGYWADAGKP 332
           L+LV     A +S +P   E+ L C  +  +G ++GL   G   GLF   W   A  G P
Sbjct: 337 LILVVSGLSAGMSIIPTFPEI-LSCAHE--NGFEEGLSTLGLVSGLFSAMWSIGAFMG-P 392

Query: 333 TING 344
           T+ G
Sbjct: 393 TLGG 396


>AL032821-1|CAI95705.1|  456|Homo sapiens protein ( Human DNA
           sequence from clone RP1-55C23 on chromosome 6q22.3-23.3 
           Contains a pseudogene similar to part of hepatic
           leukemia factor  ).
          Length = 456

 Score = 30.7 bits (66), Expect = 7.4
 Identities = 22/64 (34%), Positives = 31/64 (48%)
 Frame = +3

Query: 153 LLLVAGVCFADVSELPPVTEVCLGCICQAISGCKQGLQCEGETCGLFRITWGYWADAGKP 332
           L+LV     A +S +P   E+ L C  +  +G ++GL   G   GLF   W   A  G P
Sbjct: 337 LILVVSGLSAGMSIIPTFPEI-LSCAHE--NGFEEGLSTLGLVSGLFSAMWSIGAFMG-P 392

Query: 333 TING 344
           T+ G
Sbjct: 393 TLGG 396


>AK123191-1|BAC85553.1|  221|Homo sapiens protein ( Homo sapiens
           cDNA FLJ41197 fis, clone BRACE2045947. ).
          Length = 221

 Score = 30.3 bits (65), Expect = 9.8
 Identities = 18/58 (31%), Positives = 25/58 (43%)
 Frame = -1

Query: 295 RKRPHVSPSHCRPCLHPEIAWQMQPRHTSVTGGSSETSAKQTPATNSNAQNLITAEAI 122
           R+RP  S  HC+ C      W  +PR +S     S T  +      +  Q LI  EA+
Sbjct: 115 RQRPAASRPHCQQC-----PWPSEPRRSSTPSRPSSTPPRPAGQGQALPQILIGREAL 167


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,930,198
Number of Sequences: 237096
Number of extensions: 2413740
Number of successful extensions: 5113
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 4870
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5113
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11381686510
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)