Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_P16
         (871 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    35   7e-04
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    27   0.19 

>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 35.1 bits (77), Expect = 7e-04
 Identities = 22/77 (28%), Positives = 31/77 (40%)
 Frame = +1

Query: 334 LPKNLEFSIFYEKMRXXAXALFKLFYYAXXFECFYKTACYARVYMNXAXFLXXXXXXXXX 513
           L ++  FS+F  K R  A  L  +F      +     A YAR  +N   F          
Sbjct: 74  LERDANFSLFIPKHRRIAGRLIDIFLGMRNVDDLLSVAVYARDRVNPYLFSYALSVAILH 133

Query: 514 RSDTASFVLPAPYEAYP 564
           R DT    LP+  E++P
Sbjct: 134 RQDTQDIDLPSFIESFP 150



 Score = 25.8 bits (54), Expect = 0.44
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = +2

Query: 728 EDRXAYLTXXVGLNAYYYYFHSHLPF 805
           E R AY    +G+N +++++H   PF
Sbjct: 191 EHRLAYFREDLGINLHHWHWHLVYPF 216


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 27.1 bits (57), Expect = 0.19
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = +2

Query: 722 NNEDRXAYLTXXVGLNAYYYYFHSHLPF 805
           + E R AY    +GLN +++++H   PF
Sbjct: 189 DEEHRVAYWREDIGLNLHHWHWHLVYPF 216


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,421
Number of Sequences: 336
Number of extensions: 2408
Number of successful extensions: 6
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 23996456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)