Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_P16
         (871 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL032663-9|CAA21764.2|  187|Caenorhabditis elegans Hypothetical ...    28   7.5  
Z92838-2|CAB07408.1|  211|Caenorhabditis elegans Hypothetical pr...    28   10.0 

>AL032663-9|CAA21764.2|  187|Caenorhabditis elegans Hypothetical
           protein Y75B12B.1 protein.
          Length = 187

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 13/25 (52%), Positives = 15/25 (60%)
 Frame = +3

Query: 27  REFLXFLTVRFYGSDHEXCLDFSGA 101
           REF  F   RFY  DH+ CLD + A
Sbjct: 145 REF-DFWWNRFYNGDHDLCLDMTAA 168


>Z92838-2|CAB07408.1|  211|Caenorhabditis elegans Hypothetical
           protein T03D8.3 protein.
          Length = 211

 Score = 27.9 bits (59), Expect = 10.0
 Identities = 15/36 (41%), Positives = 23/36 (63%)
 Frame = -2

Query: 300 VGFHVCVAVLAGLDVEVLGDFVVLSFIADLVNVVEK 193
           V F V VA + GLD+E  GDFV+ S   D ++++ +
Sbjct: 8   VFFTVGVAAIYGLDLENAGDFVLPS--GDFIDLISR 41


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,634,551
Number of Sequences: 27780
Number of extensions: 213237
Number of successful extensions: 424
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 423
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 424
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2181923744
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)