Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_P15
         (908 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_01_0444 + 3141018-3141503,3141967-3142066,3142940-3142980           31   1.3  
03_01_0286 - 2208242-2208249,2208399-2208506,2209482-2210226           28   8.9  

>06_01_0444 + 3141018-3141503,3141967-3142066,3142940-3142980
          Length = 208

 Score = 31.1 bits (67), Expect = 1.3
 Identities = 24/108 (22%), Positives = 44/108 (40%), Gaps = 2/108 (1%)
 Frame = +3

Query: 468 DDGRPAYGDGXDKTSPRVSWKLIALWENNKVYFKILNTERNQYLVL-GVGTNWNGDHMAF 644
           DD R       D+ S   +W +  L  N      + +    +YL       +WN + +  
Sbjct: 24  DDDRSGVSLQQDRASVHAAWAVHILHFNGGDVLMLHSAANGRYLAAYRAEGSWNVERL-- 81

Query: 645 GVNSVDSFRAQWYLQPAKYDNDVLF-YIYNREYSKALTLSRTVEPSGS 785
            +N + S    WY   ++Y +DVL  +  +  + +AL     +  SG+
Sbjct: 82  NLNRLPSLTFSWYALGSRYGDDVLLRHFKSMFFLRALFRRDRISNSGA 129


>03_01_0286 - 2208242-2208249,2208399-2208506,2209482-2210226
          Length = 286

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 14/36 (38%), Positives = 19/36 (52%)
 Frame = +3

Query: 738 YSKALTLSRTVEPSGSPHGLGIHGQSXRKSRTLRLG 845
           Y +   +S +  P G PHG GI GQ   K+  + LG
Sbjct: 226 YLEKCYISYSYYPHGIPHGGGIGGQQTAKTVAIVLG 261


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,442,787
Number of Sequences: 37544
Number of extensions: 366716
Number of successful extensions: 1003
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 980
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1003
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2577242800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)