Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_P14
         (912 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    25   0.62 
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    24   1.4  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    24   1.9  
AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein p...    24   1.9  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    24   1.9  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    22   7.6  

>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 25.4 bits (53), Expect = 0.62
 Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 5/57 (8%)
 Frame = +3

Query: 258 FSYSIDNDEDSSATARYNLDTKK-FTTI----EGVNNGFAQTVDPTTQTVYIGGSDG 413
           F Y  +N +    + R+NL   K F  +    +    G    +DP+ + V+IGG+ G
Sbjct: 117 FPYYRENKQGWQNSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSAEDVFIGGTTG 173


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 7/21 (33%), Positives = 11/21 (52%)
 Frame = -1

Query: 759 WKQACTTPCAFKANPLTPEIF 697
           W+  C  P   + NP+ P +F
Sbjct: 334 WRSYCIQPPCGQLNPINPNVF 354


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 23.8 bits (49), Expect = 1.9
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +2

Query: 620 HFLHEYLWSLQTEXGY 667
           HFLHE  + L+ + GY
Sbjct: 129 HFLHENKYQLEVDSGY 144


>AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein
           protein.
          Length = 210

 Score = 23.8 bits (49), Expect = 1.9
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +2

Query: 620 HFLHEYLWSLQTEXGY 667
           HFLHE  + L+ + GY
Sbjct: 129 HFLHENKYQLEVDSGY 144


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 23.8 bits (49), Expect = 1.9
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +2

Query: 620 HFLHEYLWSLQTEXGY 667
           HFLHE  + L+ + GY
Sbjct: 129 HFLHENKYQLEVDSGY 144


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.8 bits (44), Expect = 7.6
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = +1

Query: 475 YGPYSTKTCCISQRTPHTFSTRFQ 546
           Y   + K C + +R PH +  RF+
Sbjct: 221 YQNATRKVCGVWKRIPHDYRKRFR 244


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 184,668
Number of Sequences: 336
Number of extensions: 3640
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 25444518
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)