Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_P14
         (912 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_9823| Best HMM Match : No HMM Matches (HMM E-Value=.)               31   0.98 
SB_44253| Best HMM Match : rve (HMM E-Value=8.4e-10)                   29   5.2  
SB_54154| Best HMM Match : HA2 (HMM E-Value=3.5e-22)                   29   6.9  
SB_37336| Best HMM Match : Peptidase_S7 (HMM E-Value=2.7)              28   9.1  

>SB_9823| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1329

 Score = 31.5 bits (68), Expect = 0.98
 Identities = 15/42 (35%), Positives = 23/42 (54%)
 Frame = -2

Query: 791 PRCYSESIRRFGSKRAPRPAHLRQILSHXKSSNTXVQNRVFS 666
           PRC  E++ RFGSK + +P     + SH K+S      ++ S
Sbjct: 817 PRCLEEAVMRFGSKSSKQPC-CTVVDSHGKASVVLTYGKLLS 857


>SB_44253| Best HMM Match : rve (HMM E-Value=8.4e-10)
          Length = 589

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
 Frame = +2

Query: 707 GVRGFALNAQG-VVHACFQNGVYSLNNTEVGLKKIVSVDDAFGVAFDKXNNLI 862
           G R   + AQG  +  C Q  + +L  T + LK++   D  +  AFDK  + I
Sbjct: 246 GARKIPIKAQGPTIQEC-QTDMQTLQTTSLSLKRLFQWDANYQEAFDKIKHSI 297


>SB_54154| Best HMM Match : HA2 (HMM E-Value=3.5e-22)
          Length = 354

 Score = 28.7 bits (61), Expect = 6.9
 Identities = 15/53 (28%), Positives = 24/53 (45%)
 Frame = +3

Query: 42  FXLLVIRXTQKHMXEMKLFLLMXSVIVTQAGTLRGXCKGVEINGVTYEXEXLY 200
           F L++IR       ++KL L+  ++      T  G C  + I G TY  +  Y
Sbjct: 105 FLLIIIRDLLPRRPDLKLVLMSATLNAEIFSTYFGKCPMLHIPGFTYPVKEFY 157


>SB_37336| Best HMM Match : Peptidase_S7 (HMM E-Value=2.7)
          Length = 481

 Score = 28.3 bits (60), Expect = 9.1
 Identities = 18/57 (31%), Positives = 29/57 (50%)
 Frame = +2

Query: 644 SLQTEXGY*RRGFVRXCLKISGVRGFALNAQGVVHACFQNGVYSLNNTEVGLKKIVS 814
           SL++   Y +  FV+ C+K+ G   F      +  A F + + + N+   GL KIVS
Sbjct: 400 SLRSYPFYEKHFFVKECIKLLGADAFKQAYDYLKDARFSDELRNENSIMDGLGKIVS 456


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,657,777
Number of Sequences: 59808
Number of extensions: 505568
Number of successful extensions: 1214
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1046
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1213
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2633701421
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)