Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_P14
         (912 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF063021-4|AAC16248.1|   93|Anopheles gambiae unknown protein.         24   5.6  
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript...    23   9.7  

>AF063021-4|AAC16248.1|   93|Anopheles gambiae unknown protein.
          Length = 93

 Score = 24.2 bits (50), Expect = 5.6
 Identities = 14/33 (42%), Positives = 17/33 (51%), Gaps = 2/33 (6%)
 Frame = +1

Query: 718 ICLKCAGRGARLLPKRRILSE*HR--GRPKENC 810
           +C  CA R AR  P R IL+   R   RP  +C
Sbjct: 1   MCTSCAWRCARASPSRPILTTRGRRWPRPPTSC 33


>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 23.4 bits (48), Expect = 9.7
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +2

Query: 518 PLTHSLHVFKRSDHQV 565
           P T  +H F RSDHQ+
Sbjct: 206 PETWEVHEFARSDHQL 221


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 817,397
Number of Sequences: 2352
Number of extensions: 16065
Number of successful extensions: 31
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 98814789
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)