Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP02_F_P13
(910 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P99027 Cluster: 60S acidic ribosomal protein P2; n=85; ... 94 5e-18
UniRef50_P05387 Cluster: 60S acidic ribosomal protein P2; n=16; ... 94 5e-18
UniRef50_P42037 Cluster: 60S acidic ribosomal protein P2; n=13; ... 89 1e-16
UniRef50_P42038 Cluster: 60S acidic ribosomal protein P2; n=10; ... 87 8e-16
UniRef50_Q9LXM8 Cluster: 60S acidic ribosomal protein P2-4; n=33... 83 7e-15
UniRef50_Q96UQ7 Cluster: 60S acidic ribosomal protein P2; n=3; E... 83 1e-14
UniRef50_O01504 Cluster: 60S acidic ribosomal protein P2; n=3; C... 79 1e-13
UniRef50_Q38M67 Cluster: Putative uncharacterized protein; n=1; ... 75 2e-12
UniRef50_P05319 Cluster: 60S acidic ribosomal protein P2-alpha; ... 75 3e-12
UniRef50_Q4UE75 Cluster: 60S acidic ribosomal protein p2, putati... 67 7e-10
UniRef50_Q9GPU2 Cluster: 60S acidic ribosomal protein P2; n=3; E... 63 1e-08
UniRef50_UPI0000F2E68D Cluster: PREDICTED: similar to Wdr89 prot... 61 4e-08
UniRef50_A1Z2Q4 Cluster: Putative uncharacterized protein; n=1; ... 60 6e-08
UniRef50_A0EAT4 Cluster: Chromosome undetermined scaffold_87, wh... 59 2e-07
UniRef50_O00806 Cluster: 60S acidic ribosomal protein P2; n=7; E... 57 5e-07
UniRef50_UPI0000DD7D25 Cluster: PREDICTED: similar to 60S acidic... 56 9e-07
UniRef50_Q7QU70 Cluster: GLP_226_29574_29942; n=1; Giardia lambl... 56 1e-06
UniRef50_Q8H6Y5 Cluster: Ribosomal protein; n=1; Phytophthora in... 56 2e-06
UniRef50_Q06382 Cluster: 60S acidic ribosomal protein P2-2; n=6;... 56 2e-06
UniRef50_Q6ZL73 Cluster: Putative 60S acidic ribosomal protein; ... 55 3e-06
UniRef50_P26795 Cluster: 60S acidic ribosomal protein P2-B; n=15... 53 9e-06
UniRef50_UPI000049954E Cluster: hypothetical protein 12.t00059; ... 52 2e-05
UniRef50_A2FPV1 Cluster: 60s Acidic ribosomal protein; n=4; Tric... 48 3e-04
UniRef50_UPI00006126C6 Cluster: PREDICTED: hypothetical protein;... 47 8e-04
UniRef50_P23632 Cluster: 60S acidic ribosomal protein P2-A; n=9;... 46 0.002
UniRef50_UPI0000F2D663 Cluster: PREDICTED: hypothetical protein;... 44 0.005
UniRef50_A3BIA4 Cluster: Putative uncharacterized protein; n=1; ... 42 0.016
UniRef50_UPI0001509D32 Cluster: 60s Acidic ribosomal protein; n=... 42 0.022
UniRef50_P08570 Cluster: 60S acidic ribosomal protein P1; n=15; ... 39 0.20
UniRef50_P50344 Cluster: 60S acidic ribosomal protein P1; n=14; ... 38 0.35
UniRef50_UPI00015BB266 Cluster: Protein of unknown function DUF5... 37 0.82
UniRef50_UPI000049A172 Cluster: hypothetical protein 154.t00025;... 37 0.82
UniRef50_Q8CHJ1-2 Cluster: Isoform 2 of Q8CHJ1 ; n=1; Rattus nor... 37 0.82
UniRef50_A0EGR2 Cluster: Chromosome undetermined scaffold_96, wh... 36 1.1
UniRef50_P10622 Cluster: 60S acidic ribosomal protein P1-beta; n... 36 1.1
UniRef50_UPI000155BA8E Cluster: PREDICTED: hypothetical protein;... 36 1.4
UniRef50_UPI0000F2D36E Cluster: PREDICTED: hypothetical protein;... 34 4.4
UniRef50_Q9HFQ7 Cluster: 60S acidic ribosomal protein P1-A; n=11... 34 5.8
UniRef50_Q7R992 Cluster: Acidic ribosomal protein P1-hydromedusa... 33 7.6
UniRef50_Q7QU71 Cluster: GLP_226_29764_29144; n=1; Giardia lambl... 33 7.6
UniRef50_A0CRF6 Cluster: Chromosome undetermined scaffold_25, wh... 33 7.6
>UniRef50_P99027 Cluster: 60S acidic ribosomal protein P2; n=85;
Eukaryota|Rep: 60S acidic ribosomal protein P2 - Mus
musculus (Mouse)
Length = 115
Score = 93.9 bits (223), Expect = 5e-18
Identities = 53/110 (48%), Positives = 67/110 (60%), Gaps = 6/110 (5%)
Frame = +3
Query: 156 LAVLGGKXTPAAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLISAGREXLSSMPVG 335
LA LGG +P+A D++KIL SVGIEAD ++L KVI+ELNGK++E +I+ G L+S+P G
Sbjct: 9 LAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQGVGKLASVPAG 68
Query: 336 G------GXXXXXXXXXXXXXXXEEKKEXXKEXXXXXSESDDDMGFGLFD 467
G EEKK+ KE ESDDDMGFGLFD
Sbjct: 69 GAVAVSAAPGSAAPAAGSAPAAAEEKKDEKKE---ESEESDDDMGFGLFD 115
>UniRef50_P05387 Cluster: 60S acidic ribosomal protein P2; n=16;
Bilateria|Rep: 60S acidic ribosomal protein P2 - Homo
sapiens (Human)
Length = 115
Score = 93.9 bits (223), Expect = 5e-18
Identities = 53/110 (48%), Positives = 67/110 (60%), Gaps = 6/110 (5%)
Frame = +3
Query: 156 LAVLGGKXTPAAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLISAGREXLSSMPVG 335
LA LGG +P+A D++KIL SVGIEAD ++L KVI+ELNGK++E +I+ G L+S+P G
Sbjct: 9 LAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQGIGKLASVPAG 68
Query: 336 G------GXXXXXXXXXXXXXXXEEKKEXXKEXXXXXSESDDDMGFGLFD 467
G EEKK+ KE ESDDDMGFGLFD
Sbjct: 69 GAVAVSAAPGSAAPAAGSAPAAAEEKKDEKKE---ESEESDDDMGFGLFD 115
>UniRef50_P42037 Cluster: 60S acidic ribosomal protein P2; n=13;
Eukaryota|Rep: 60S acidic ribosomal protein P2 -
Alternaria alternata (Alternaria rot fungus)
Length = 113
Score = 89.0 bits (211), Expect = 1e-16
Identities = 45/102 (44%), Positives = 63/102 (61%), Gaps = 1/102 (0%)
Frame = +3
Query: 165 LGGKXTPAAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLISAGREXLSSMPVGG-G 341
LGG +P+AADV+ +L SVGIEAD+++L K+I+EL GKD+ +LI++G E L+S+P GG G
Sbjct: 12 LGGNTSPSAADVKAVLESVGIEADSDRLDKLISELEGKDINELIASGSEKLASVPSGGAG 71
Query: 342 XXXXXXXXXXXXXXXEEKKEXXKEXXXXXSESDDDMGFGLFD 467
+ + ESD+DMGFGLFD
Sbjct: 72 GAAASGGAAAAGGSAQAEAAPEAAKEEEKEESDEDMGFGLFD 113
>UniRef50_P42038 Cluster: 60S acidic ribosomal protein P2; n=10;
Eukaryota|Rep: 60S acidic ribosomal protein P2 -
Cladosporium herbarum (Davidiella tassiana)
Length = 111
Score = 86.6 bits (205), Expect = 8e-16
Identities = 46/102 (45%), Positives = 61/102 (59%), Gaps = 1/102 (0%)
Frame = +3
Query: 165 LGGKXTPAAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLISAGREXLSSMPVGG-G 341
L G +P+A D++ +LSSVGI+AD E+L ++ EL GKD+ +LIS+G + L+S+P GG G
Sbjct: 12 LAGNSSPSAEDIKTVLSSVGIDADEERLSSLLKELEGKDINELISSGSQKLASVPSGGSG 71
Query: 342 XXXXXXXXXXXXXXXEEKKEXXKEXXXXXSESDDDMGFGLFD 467
E E KE ESDDDMGFGLFD
Sbjct: 72 AAPSAGGAAAAGGATEAAPEAAKE--EEKEESDDDMGFGLFD 111
>UniRef50_Q9LXM8 Cluster: 60S acidic ribosomal protein P2-4; n=33;
Eukaryota|Rep: 60S acidic ribosomal protein P2-4 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 111
Score = 83.4 bits (197), Expect = 7e-15
Identities = 44/106 (41%), Positives = 64/106 (60%), Gaps = 2/106 (1%)
Frame = +3
Query: 156 LAVLGGKXTPAAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLISAGREXLSSMPVG 335
LAVLGG P+A +++ I+ +VG + D E ++ ++ E++GKD+ +LI++GRE L+S+P G
Sbjct: 9 LAVLGGNANPSADNIKDIIGAVGADVDGESIELLLKEVSGKDIAELIASGREKLASVPSG 68
Query: 336 GG--XXXXXXXXXXXXXXXEEKKEXXKEXXXXXSESDDDMGFGLFD 467
GG EKKE KE ESDDDMGF LF+
Sbjct: 69 GGVAVSAAPSSGGGGAAAPAEKKEAKKE---EKEESDDDMGFSLFE 111
>UniRef50_Q96UQ7 Cluster: 60S acidic ribosomal protein P2; n=3;
Eukaryota|Rep: 60S acidic ribosomal protein P2 -
Rhodotorula glutinis (Yeast)
Length = 110
Score = 82.6 bits (195), Expect = 1e-14
Identities = 44/104 (42%), Positives = 60/104 (57%)
Frame = +3
Query: 156 LAVLGGKXTPAAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLISAGREXLSSMPVG 335
L V G +P+A DV+K+L++ I+AD E+L +I EL GKDV ++I+ G + L+S+P G
Sbjct: 9 LLVSAGNTSPSAEDVKKVLAAADIQADEERLSVLIKELEGKDVNEVIAEGSKKLASVPSG 68
Query: 336 GGXXXXXXXXXXXXXXXEEKKEXXKEXXXXXSESDDDMGFGLFD 467
G EEK E + ESDDDMGFGLFD
Sbjct: 69 GAAPAAAAGGAAAGGAAEEKAE--DKPAEKDEESDDDMGFGLFD 110
>UniRef50_O01504 Cluster: 60S acidic ribosomal protein P2; n=3;
Chromadorea|Rep: 60S acidic ribosomal protein P2 -
Caenorhabditis elegans
Length = 107
Score = 79.4 bits (187), Expect = 1e-13
Identities = 45/105 (42%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Frame = +3
Query: 156 LAVLGGKXTPAAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLISAGREXLSSMPVG 335
LA LGG +P+A DV K+L + G++ D E V+ L GK + ++I+ G+ LSS+P G
Sbjct: 9 LATLGGNASPSAQDVLKVLEAGGLDCDMENANSVVDALKGKTISEVIAQGKVKLSSVPSG 68
Query: 336 GGXXXXXXXXXXXXXXXEE-KKEXXKEXXXXXSESDDDMGFGLFD 467
G EE KKE KE ESDDDMGFGLFD
Sbjct: 69 GSAPAAAAPSGGAAPKAEEKKKEEPKE------ESDDDMGFGLFD 107
>UniRef50_Q38M67 Cluster: Putative uncharacterized protein; n=1;
Solanum tuberosum|Rep: Putative uncharacterized protein
- Solanum tuberosum (Potato)
Length = 162
Score = 75.4 bits (177), Expect = 2e-12
Identities = 32/62 (51%), Positives = 51/62 (82%)
Frame = +3
Query: 156 LAVLGGKXTPAAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLISAGREXLSSMPVG 335
LAVLGG P+ D++KIL+SVG EAD ++++ ++++++GKD+ +LI+AGRE L+S+P G
Sbjct: 9 LAVLGGNTCPSEKDLKKILASVGAEADDDRIQLLLSQVDGKDITELIAAGREKLASVPAG 68
Query: 336 GG 341
GG
Sbjct: 69 GG 70
>UniRef50_P05319 Cluster: 60S acidic ribosomal protein P2-alpha;
n=19; Eukaryota|Rep: 60S acidic ribosomal protein
P2-alpha - Saccharomyces cerevisiae (Baker's yeast)
Length = 106
Score = 74.9 bits (176), Expect = 3e-12
Identities = 42/105 (40%), Positives = 56/105 (53%)
Frame = +3
Query: 153 YLAVLGGKXTPAAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLISAGREXLSSMPV 332
YL + TP A ++ IL SVGIE + EK+ V++ L GK V++LI+ G E L+++P
Sbjct: 7 YLLLNAAGNTPDATKIKAILESVGIEIEDEKVSSVLSALEGKSVDELITEGNEKLAAVPA 66
Query: 333 GGGXXXXXXXXXXXXXXXEEKKEXXKEXXXXXSESDDDMGFGLFD 467
G EE+KE ESDDDMGFGLFD
Sbjct: 67 AGPASAGGAAAASGDAAAEEEKEEEAA-----EESDDDMGFGLFD 106
>UniRef50_Q4UE75 Cluster: 60S acidic ribosomal protein p2, putative;
n=2; Theileria|Rep: 60S acidic ribosomal protein p2,
putative - Theileria annulata
Length = 110
Score = 66.9 bits (156), Expect = 7e-10
Identities = 39/104 (37%), Positives = 55/104 (52%)
Frame = +3
Query: 156 LAVLGGKXTPAAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLISAGREXLSSMPVG 335
LAV G +P+ DV +L+SVG E D + L + ++GK V + ISAG + L ++P G
Sbjct: 11 LAVTCGNESPSKDDVRDVLNSVGSEVDEDALSAFFSAVSGKVVHETISAGLDKLQTLPAG 70
Query: 336 GGXXXXXXXXXXXXXXXEEKKEXXKEXXXXXSESDDDMGFGLFD 467
GG E+++E KE E +DDMGF LFD
Sbjct: 71 GG--VSVASTVQASGSSEKQEEAKKE--AEPEEEEDDMGFSLFD 110
>UniRef50_Q9GPU2 Cluster: 60S acidic ribosomal protein P2; n=3;
Euplotes|Rep: 60S acidic ribosomal protein P2 - Euplotes
raikovi
Length = 113
Score = 62.9 bits (146), Expect = 1e-08
Identities = 34/99 (34%), Positives = 53/99 (53%)
Frame = +3
Query: 156 LAVLGGKXTPAAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLISAGREXLSSMPVG 335
L VLGG +P+A DV+K+L SVG++++ +KL ++ L GK + +LI AG +SS+ G
Sbjct: 9 LLVLGGNSSPSADDVKKVLKSVGVDSEQDKLDALLKNLEGKQLHELIEAGSSKVSSLSAG 68
Query: 336 GGXXXXXXXXXXXXXXXEEKKEXXKEXXXXXSESDDDMG 452
G E +KE + E+D +MG
Sbjct: 69 AGPSGGAAAAGADAGAAEAEKEEEPQ----EEEADVNMG 103
>UniRef50_UPI0000F2E68D Cluster: PREDICTED: similar to Wdr89
protein; n=4; Monodelphis domestica|Rep: PREDICTED:
similar to Wdr89 protein - Monodelphis domestica
Length = 72
Score = 60.9 bits (141), Expect = 4e-08
Identities = 31/61 (50%), Positives = 41/61 (67%)
Frame = +3
Query: 153 YLAVLGGKXTPAAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLISAGREXLSSMPV 332
+LAVLG +P + DV+KIL ++ I+AD E+L KVI N K++E LIS G L SMP
Sbjct: 5 FLAVLGSNDSPNSKDVKKILGNINIKADEERL-KVIGNFNSKNIEDLISQGSNKLDSMPN 63
Query: 333 G 335
G
Sbjct: 64 G 64
>UniRef50_A1Z2Q4 Cluster: Putative uncharacterized protein; n=1;
Pectinaria gouldii|Rep: Putative uncharacterized protein
- Pectinaria gouldii (Trumpet worm) (Ice-cream cone
worm)
Length = 118
Score = 60.5 bits (140), Expect = 6e-08
Identities = 32/61 (52%), Positives = 42/61 (68%)
Frame = +3
Query: 156 LAVLGGKXTPAAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLISAGREXLSSMPVG 335
LA LGG A ++ IL SVGI+AD EKL KVI EL GKD+ ++I+A + L+S+P G
Sbjct: 9 LAALGGNNNVDAKAIKGILGSVGIDADDEKLNKVIAELKGKDIAEVIAADAK-LASVPSG 67
Query: 336 G 338
G
Sbjct: 68 G 68
>UniRef50_A0EAT4 Cluster: Chromosome undetermined scaffold_87, whole
genome shotgun sequence; n=6; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_87,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 113
Score = 58.8 bits (136), Expect = 2e-07
Identities = 32/105 (30%), Positives = 50/105 (47%), Gaps = 1/105 (0%)
Frame = +3
Query: 156 LAVLGGKXTPAAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLISAGREXLSSMPVG 335
L VLGG P D+ K+L G+E+ A +K V++ L GK++ +I G++ L+S+ VG
Sbjct: 9 LLVLGGNNAPTEDDITKLLKEAGVESVAADVKNVVSTLKGKNLNDVIKEGQKQLTSLSVG 68
Query: 336 GGXXXXXXXXXXXXXXXEEKKEXXKEXXXXXSESDDDMGF-GLFD 467
GG + E E ++D+ GLFD
Sbjct: 69 GGAQQSSAPAPQATTAAQTAPAAKVEPPKKAEEPEEDVDMGGLFD 113
>UniRef50_O00806 Cluster: 60S acidic ribosomal protein P2; n=7;
Eukaryota|Rep: 60S acidic ribosomal protein P2 -
Plasmodium falciparum
Length = 112
Score = 57.2 bits (132), Expect = 5e-07
Identities = 30/103 (29%), Positives = 49/103 (47%)
Frame = +3
Query: 156 LAVLGGKXTPAAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLISAGREXLSSMPVG 335
+ VLGG P+ +V+ +L +V + + E L I L GK +LI+ G + L + +G
Sbjct: 11 MCVLGGNENPSTKEVKNVLGAVNADVEDEVLNNFIDSLKGKSCHELITDGLKKLQN--IG 68
Query: 336 GGXXXXXXXXXXXXXXXEEKKEXXKEXXXXXSESDDDMGFGLF 464
GG +K++ +E E +DD+GF LF
Sbjct: 69 GGVAAAPAGAAAVETAEAKKEDKKEEKKEEEEEEEDDLGFSLF 111
>UniRef50_UPI0000DD7D25 Cluster: PREDICTED: similar to 60S acidic
ribosomal protein P2 (NY-REN-44 antigen); n=5;
Mammalia|Rep: PREDICTED: similar to 60S acidic ribosomal
protein P2 (NY-REN-44 antigen) - Homo sapiens
Length = 81
Score = 56.4 bits (130), Expect = 9e-07
Identities = 26/51 (50%), Positives = 38/51 (74%)
Frame = +3
Query: 186 AAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLISAGREXLSSMPVGG 338
+A D++KIL VG+EA + L KVI+ELNGK++E +I+ G L+S+P GG
Sbjct: 7 SAKDIKKILDRVGMEATDDWLNKVISELNGKNIEDIIAQGIGELASVPAGG 57
>UniRef50_Q7QU70 Cluster: GLP_226_29574_29942; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_226_29574_29942 - Giardia lamblia
ATCC 50803
Length = 122
Score = 56.0 bits (129), Expect = 1e-06
Identities = 28/63 (44%), Positives = 42/63 (66%), Gaps = 2/63 (3%)
Frame = +3
Query: 156 LAVLGGKXTPAAADVEKILSSVGIEADAEKLKKVITEL--NGKDVEQLISAGREXLSSMP 329
LA +GGK PA AD+EKI+++VG DA+ K V+ ++ G VE L+S G++ ++SMP
Sbjct: 9 LAKMGGKNEPAVADIEKIIAAVGGTTDADLAKTVVEKVGAGGLSVEDLMSLGKKRMASMP 68
Query: 330 VGG 338
G
Sbjct: 69 AVG 71
>UniRef50_Q8H6Y5 Cluster: Ribosomal protein; n=1; Phytophthora
infestans|Rep: Ribosomal protein - Phytophthora
infestans (Potato late blight fungus)
Length = 135
Score = 55.6 bits (128), Expect = 2e-06
Identities = 28/61 (45%), Positives = 36/61 (59%)
Frame = +3
Query: 156 LAVLGGKXTPAAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLISAGREXLSSMPVG 335
LAVLGG TP DVEKIL S +E D ++ VI + GK E++I+AG E L+
Sbjct: 9 LAVLGGHTTPTENDVEKILKSSDVEVDKARVAAVIKAMEGKTAEEVIAAGSEKLAKFGSA 68
Query: 336 G 338
G
Sbjct: 69 G 69
>UniRef50_Q06382 Cluster: 60S acidic ribosomal protein P2-2; n=6;
Eukaryota|Rep: 60S acidic ribosomal protein P2-2 -
Leishmania infantum
Length = 111
Score = 55.6 bits (128), Expect = 2e-06
Identities = 33/98 (33%), Positives = 45/98 (45%)
Frame = +3
Query: 174 KXTPAAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLISAGREXLSSMPVGGGXXXX 353
K +P+ ADVE I +V I+ D L V+ + G+DV LI+ G +S+MP
Sbjct: 16 KASPSQADVEAICKAVHIDVDQATLAFVMESVTGRDVATLIAEGAAKMSAMPAASSGAAA 75
Query: 354 XXXXXXXXXXXEEKKEXXKEXXXXXSESDDDMGFGLFD 467
K+ E+DDDMGFGLFD
Sbjct: 76 GVTASAAGDAAPAAAAAKKD--EPEEEADDDMGFGLFD 111
>UniRef50_Q6ZL73 Cluster: Putative 60S acidic ribosomal protein;
n=4; Oryza sativa|Rep: Putative 60S acidic ribosomal
protein - Oryza sativa subsp. japonica (Rice)
Length = 167
Score = 54.8 bits (126), Expect = 3e-06
Identities = 32/104 (30%), Positives = 50/104 (48%)
Frame = +3
Query: 156 LAVLGGKXTPAAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLISAGREXLSSMPVG 335
+A +GG +P DV IL +VG + D +KL + ++ GKD+ ++++AG E L+
Sbjct: 67 MATIGGNASPTKDDVRAILGAVGADIDEDKLGYLFDQVAGKDLAEILAAGSEMLAFGAAP 126
Query: 336 GGXXXXXXXXXXXXXXXEEKKEXXKEXXXXXSESDDDMGFGLFD 467
EE+K KE E +DD+ F LFD
Sbjct: 127 AAAAATAGGAAAAGEKEEEEKVEEKE-----KEGEDDIVFSLFD 165
>UniRef50_P26795 Cluster: 60S acidic ribosomal protein P2-B; n=15;
Eukaryota|Rep: 60S acidic ribosomal protein P2-B -
Trypanosoma cruzi
Length = 112
Score = 53.2 bits (122), Expect = 9e-06
Identities = 31/98 (31%), Positives = 44/98 (44%)
Frame = +3
Query: 174 KXTPAAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLISAGREXLSSMPVGGGXXXX 353
K TP AADVE I + GIE +++ L V+ + G+ V L++ G +S++ V
Sbjct: 16 KPTPGAADVEAICKACGIEVESDALSFVMESIAGRSVATLVAEGAAKMSAVAVSAAPAAG 75
Query: 354 XXXXXXXXXXXEEKKEXXKEXXXXXSESDDDMGFGLFD 467
+ E DDDMGFGLFD
Sbjct: 76 DAAAPAAAAGG-AAAPAAADAKKEEEEEDDDMGFGLFD 112
>UniRef50_UPI000049954E Cluster: hypothetical protein 12.t00059;
n=3; Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
protein 12.t00059 - Entamoeba histolytica HM-1:IMSS
Length = 106
Score = 52.0 bits (119), Expect = 2e-05
Identities = 34/102 (33%), Positives = 49/102 (48%)
Frame = +3
Query: 153 YLAVLGGKXTPAAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLISAGREXLSSMPV 332
Y+ G A V++IL++ G E D K+K+V +NGK+V ++I AG++ + SM V
Sbjct: 7 YILCTIGHENAEEAKVKEILTAAGAEIDEAKIKQVFDAMNGKNVWEVIEAGKKQMGSMAV 66
Query: 333 GGGXXXXXXXXXXXXXXXEEKKEXXKEXXXXXSESDDDMGFG 458
EEKKE KE E +D GFG
Sbjct: 67 AAA-APAAGAAAQTETKAEEKKEEKKE----EEEEEDFGGFG 103
>UniRef50_A2FPV1 Cluster: 60s Acidic ribosomal protein; n=4;
Trichomonas vaginalis G3|Rep: 60s Acidic ribosomal
protein - Trichomonas vaginalis G3
Length = 106
Score = 48.4 bits (110), Expect = 3e-04
Identities = 26/86 (30%), Positives = 42/86 (48%)
Frame = +3
Query: 156 LAVLGGKXTPAAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLISAGREXLSSMPVG 335
L+ G P V+KIL + G+E DA +L+ V+T+++ K V++L+ G+ ++ VG
Sbjct: 9 LSKAAGNEKPTQEQVKKILEAAGVEVDAAQLEAVVTKMSEKSVDELVETGKTEMNK--VG 66
Query: 336 GGXXXXXXXXXXXXXXXEEKKEXXKE 413
G E KE KE
Sbjct: 67 GAAPAAGAAAAAPAAAAEAPKEEAKE 92
>UniRef50_UPI00006126C6 Cluster: PREDICTED: hypothetical protein;
n=1; Gallus gallus|Rep: PREDICTED: hypothetical protein
- Gallus gallus
Length = 138
Score = 46.8 bits (106), Expect = 8e-04
Identities = 21/35 (60%), Positives = 27/35 (77%)
Frame = +3
Query: 156 LAVLGGKXTPAAADVEKILSSVGIEADAEKLKKVI 260
LAVLGG +P + D++KIL SVGIE D E+L KV+
Sbjct: 9 LAVLGGNESPTSKDLKKILDSVGIETDDERLNKVV 43
>UniRef50_P23632 Cluster: 60S acidic ribosomal protein P2-A; n=9;
Trypanosomatidae|Rep: 60S acidic ribosomal protein P2-A
- Trypanosoma cruzi
Length = 107
Score = 45.6 bits (103), Expect = 0.002
Identities = 27/96 (28%), Positives = 39/96 (40%)
Frame = +3
Query: 180 TPAAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLISAGREXLSSMPVGGGXXXXXX 359
TP+ + VE +L + G+ D ++ + E GKD + + + G+ L VGG
Sbjct: 16 TPSKSAVEAVLKAAGVPVDPSRVDALFAEFAGKDFDTVCTEGKSKL----VGGVTRPNAA 71
Query: 360 XXXXXXXXXEEKKEXXKEXXXXXSESDDDMGFGLFD 467
E DDDMGFGLFD
Sbjct: 72 TASAPTAAAAASSGAAAPAAAAEEEEDDDMGFGLFD 107
>UniRef50_UPI0000F2D663 Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 74
Score = 44.0 bits (99), Expect = 0.005
Identities = 26/57 (45%), Positives = 36/57 (63%)
Frame = +3
Query: 156 LAVLGGKXTPAAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLISAGREXLSSM 326
LAVL +P ++KILSS+G EA+AE L KVI + N K+ E++I L+SM
Sbjct: 9 LAVLSSNKSPNCRHLKKILSSIGTEAEAEWL-KVIGKFNIKNTEEVILQESSKLASM 64
>UniRef50_A3BIA4 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 102
Score = 42.3 bits (95), Expect = 0.016
Identities = 17/49 (34%), Positives = 31/49 (63%)
Frame = +3
Query: 156 LAVLGGKXTPAAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLISA 302
+A +GG +P DV IL +VG + D +KL + ++ GKD+ ++++A
Sbjct: 9 MATIGGNASPTKDDVRAILGAVGADVDEDKLGYLFDQVAGKDLSEILAA 57
>UniRef50_UPI0001509D32 Cluster: 60s Acidic ribosomal protein; n=1;
Tetrahymena thermophila SB210|Rep: 60s Acidic ribosomal
protein - Tetrahymena thermophila SB210
Length = 131
Score = 41.9 bits (94), Expect = 0.022
Identities = 31/104 (29%), Positives = 45/104 (43%)
Frame = +3
Query: 156 LAVLGGKXTPAAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLISAGREXLSSMPVG 335
L L G P+ ADV+ ++ SV DA KL + + GK++E +I AG + + +G
Sbjct: 32 LLALNGSQ-PSEADVKALIESVNGTVDATKLSSFMNVIKGKNIEDVIKAGLSKVGN--IG 88
Query: 336 GGXXXXXXXXXXXXXXXEEKKEXXKEXXXXXSESDDDMGFGLFD 467
G E KKE K+ E D + LFD
Sbjct: 89 GA--APAAAPAAATKAPEAKKEEPKKEEPKKEEDDFEGAGDLFD 130
>UniRef50_P08570 Cluster: 60S acidic ribosomal protein P1; n=15;
Eukaryota|Rep: 60S acidic ribosomal protein P1 -
Drosophila melanogaster (Fruit fly)
Length = 112
Score = 38.7 bits (86), Expect = 0.20
Identities = 26/90 (28%), Positives = 38/90 (42%)
Frame = +3
Query: 198 VEKILSSVGIEADAEKLKKVITELNGKDVEQLISAGREXLSSMPVGGGXXXXXXXXXXXX 377
+ IL + +E + L G +V+ LI+ + + P GG
Sbjct: 28 INTILKAANVEVEPYWPGLFAKALEGINVKDLITNIGSGVGAAPAGGAAPAAAAAAPAAE 87
Query: 378 XXXEEKKEXXKEXXXXXSESDDDMGFGLFD 467
EEKK+ + +SDDDMGFGLFD
Sbjct: 88 SKKEEKKKEEES-----DQSDDDMGFGLFD 112
>UniRef50_P50344 Cluster: 60S acidic ribosomal protein P1; n=14;
Dikarya|Rep: 60S acidic ribosomal protein P1 -
Cladosporium herbarum (Davidiella tassiana)
Length = 110
Score = 37.9 bits (84), Expect = 0.35
Identities = 27/67 (40%), Positives = 30/67 (44%)
Frame = +3
Query: 267 LNGKDVEQLISAGREXLSSMPVGGGXXXXXXXXXXXXXXXEEKKEXXKEXXXXXSESDDD 446
L GKDV+ L+ + P GG EEK E KE ESDDD
Sbjct: 51 LEGKDVKDLLLNVGSGGGAAPAAGGAAAGGAAAVLDAPA-EEKAEEEKE------ESDDD 103
Query: 447 MGFGLFD 467
MGFGLFD
Sbjct: 104 MGFGLFD 110
>UniRef50_UPI00015BB266 Cluster: Protein of unknown function DUF54;
n=1; Ignicoccus hospitalis KIN4/I|Rep: Protein of
unknown function DUF54 - Ignicoccus hospitalis KIN4/I
Length = 147
Score = 36.7 bits (81), Expect = 0.82
Identities = 23/60 (38%), Positives = 33/60 (55%)
Frame = +3
Query: 159 AVLGGKXTPAAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLISAGREXLSSMPVGG 338
A G + A DVE L ++ +E +AE +KKVI L GK+ E +GR+ SS+ G
Sbjct: 91 AAYAGTPSLAEEDVESPLGAITVEVEAEDVKKVIAWLTGKEGE---VSGRDEDSSVRQNG 147
>UniRef50_UPI000049A172 Cluster: hypothetical protein 154.t00025;
n=1; Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
protein 154.t00025 - Entamoeba histolytica HM-1:IMSS
Length = 109
Score = 36.7 bits (81), Expect = 0.82
Identities = 19/52 (36%), Positives = 29/52 (55%)
Frame = +3
Query: 153 YLAVLGGKXTPAAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLISAGR 308
Y+ G A V++ILS+ G E D K+K+V +NGK+V ++I R
Sbjct: 7 YILCTIGHEHAEEAKVKEILSAAGAEIDEAKIKEVFDAMNGKNVWEVIELER 58
>UniRef50_Q8CHJ1-2 Cluster: Isoform 2 of Q8CHJ1 ; n=1; Rattus
norvegicus|Rep: Isoform 2 of Q8CHJ1 - Rattus norvegicus
(Rat)
Length = 107
Score = 36.7 bits (81), Expect = 0.82
Identities = 15/33 (45%), Positives = 24/33 (72%)
Frame = +3
Query: 165 LGGKXTPAAADVEKILSSVGIEADAEKLKKVIT 263
L G +P+A D++KIL S+GI+ ++L KV+T
Sbjct: 45 LRGNSSPSAKDIKKILDSMGIKVGGDQLNKVVT 77
>UniRef50_A0EGR2 Cluster: Chromosome undetermined scaffold_96, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_96,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 124
Score = 36.3 bits (80), Expect = 1.1
Identities = 17/51 (33%), Positives = 28/51 (54%)
Frame = +3
Query: 156 LAVLGGKXTPAAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLISAGR 308
L +LGG +P DV +L IE + +++ +I L KD+ Q+I G+
Sbjct: 66 LLLLGGNKSPTMYDVAYVLRQADIEPNLPEIEALIKSLKYKDLNQVIKEGK 116
>UniRef50_P10622 Cluster: 60S acidic ribosomal protein P1-beta;
n=21; Ascomycota|Rep: 60S acidic ribosomal protein
P1-beta - Saccharomyces cerevisiae (Baker's yeast)
Length = 106
Score = 36.3 bits (80), Expect = 1.1
Identities = 24/67 (35%), Positives = 32/67 (47%)
Frame = +3
Query: 267 LNGKDVEQLISAGREXLSSMPVGGGXXXXXXXXXXXXXXXEEKKEXXKEXXXXXSESDDD 446
L GKD+++++S ++ PV G EE+KE ESDDD
Sbjct: 48 LEGKDLKEILSGFH---NAGPVAGAGAASGAAAAGGDAAAEEEKEEEAA-----EESDDD 99
Query: 447 MGFGLFD 467
MGFGLFD
Sbjct: 100 MGFGLFD 106
>UniRef50_UPI000155BA8E Cluster: PREDICTED: hypothetical protein;
n=1; Ornithorhynchus anatinus|Rep: PREDICTED:
hypothetical protein - Ornithorhynchus anatinus
Length = 108
Score = 35.9 bits (79), Expect = 1.4
Identities = 18/27 (66%), Positives = 19/27 (70%)
Frame = +3
Query: 387 EEKKEXXKEXXXXXSESDDDMGFGLFD 467
EEKKE K+ ESDDDMGFGLFD
Sbjct: 84 EEKKEEAKKEES--EESDDDMGFGLFD 108
>UniRef50_UPI0000F2D36E Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 88
Score = 34.3 bits (75), Expect = 4.4
Identities = 16/34 (47%), Positives = 22/34 (64%)
Frame = +3
Query: 156 LAVLGGKXTPAAADVEKILSSVGIEADAEKLKKV 257
LAVLG P + D++KI + G+EAD E LK +
Sbjct: 9 LAVLGSNDCPNSKDLKKIQDNFGLEADEEWLKAI 42
>UniRef50_Q9HFQ7 Cluster: 60S acidic ribosomal protein P1-A; n=11;
Eukaryota|Rep: 60S acidic ribosomal protein P1-A -
Candida albicans (Yeast)
Length = 106
Score = 33.9 bits (74), Expect = 5.8
Identities = 18/27 (66%), Positives = 19/27 (70%)
Frame = +3
Query: 387 EEKKEXXKEXXXXXSESDDDMGFGLFD 467
EEK+E KE ESDDDMGFGLFD
Sbjct: 86 EEKEEEAKE------ESDDDMGFGLFD 106
>UniRef50_Q7R992 Cluster: Acidic ribosomal protein P1-hydromedusa;
n=5; Plasmodium|Rep: Acidic ribosomal protein
P1-hydromedusa - Plasmodium yoelii yoelii
Length = 119
Score = 33.5 bits (73), Expect = 7.6
Identities = 23/66 (34%), Positives = 30/66 (45%)
Frame = +3
Query: 267 LNGKDVEQLISAGREXLSSMPVGGGXXXXXXXXXXXXXXXEEKKEXXKEXXXXXSESDDD 446
L GKD+E L LS++ VGGG + KK+ KE E +DD
Sbjct: 61 LKGKDIEGL-------LSNLSVGGGAPAAAAQVATENAD-DGKKDSKKEEKVEEEEEEDD 112
Query: 447 MGFGLF 464
+GF LF
Sbjct: 113 LGFSLF 118
>UniRef50_Q7QU71 Cluster: GLP_226_29764_29144; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_226_29764_29144 - Giardia lamblia
ATCC 50803
Length = 206
Score = 33.5 bits (73), Expect = 7.6
Identities = 21/52 (40%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Frame = -1
Query: 304 PAEISCSTSLPLSSVITFLSFSASASI--PTELRIFSTSAAAGVXLPPSTAK 155
P + ST P + + F+ SAS+ PT IFS SA AG LPP A+
Sbjct: 5 PRLMRSSTERPPAPTFSTTVFARSASVVPPTAAIIFSMSATAGSFLPPILAR 56
>UniRef50_A0CRF6 Cluster: Chromosome undetermined scaffold_25, whole
genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_25,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 151
Score = 33.5 bits (73), Expect = 7.6
Identities = 28/103 (27%), Positives = 38/103 (36%), Gaps = 1/103 (0%)
Frame = +3
Query: 162 VLGGKXTPAAAD-VEKILSSVGIEADAEKLKKVITELNGKDVEQLISAGREXLSSMPVGG 338
+L G TP AD VEK+ G+ + + GKD+ L+S G GG
Sbjct: 59 LLAGSNTPLTADNVEKLTKKAGVNVPKQLAAAFVKAFEGKDILSLLSVG---------GG 109
Query: 339 GXXXXXXXXXXXXXXXEEKKEXXKEXXXXXSESDDDMGFGLFD 467
E + ++ E D DMG GLFD
Sbjct: 110 QGSAPAAQTTQAAAKPAEAPKAVEKPKDPEPEEDVDMG-GLFD 151
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 470,831,015
Number of Sequences: 1657284
Number of extensions: 6078074
Number of successful extensions: 14685
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 14180
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14651
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 82801539422
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -