Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP02_F_P13
(910 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M17887-1|AAA36472.1| 115|Homo sapiens protein ( Human acidic ri... 94 7e-19
CR542248-1|CAG47044.1| 115|Homo sapiens RPLP2 protein. 94 7e-19
CR542212-1|CAG47008.1| 115|Homo sapiens RPLP2 protein. 94 7e-19
BC062314-1|AAH62314.1| 115|Homo sapiens ribosomal protein, larg... 94 7e-19
BC007573-1|AAH07573.1| 115|Homo sapiens ribosomal protein, larg... 94 7e-19
BC005920-1|AAH05920.1| 115|Homo sapiens ribosomal protein, larg... 94 7e-19
BC005354-1|AAH05354.1| 115|Homo sapiens ribosomal protein, larg... 94 7e-19
AB061837-1|BAB79475.1| 115|Homo sapiens ribosomal protein P2 pr... 94 7e-19
M17886-1|AAA36471.1| 114|Homo sapiens protein ( Human acidic ri... 33 1.4
CR542209-1|CAG47005.1| 114|Homo sapiens RPLP1 protein. 33 1.4
CR450339-1|CAG29335.1| 114|Homo sapiens RPLP1 protein. 33 1.4
BC007590-1|AAH07590.1| 114|Homo sapiens ribosomal protein, larg... 33 1.4
BC003369-1|AAH03369.1| 114|Homo sapiens ribosomal protein, larg... 33 1.4
AB061836-1|BAB79474.1| 114|Homo sapiens ribosomal protein P1 pr... 33 1.4
AK126665-1|BAC86634.1| 1012|Homo sapiens protein ( Homo sapiens ... 32 3.3
AB127405-1|BAD03968.1| 1183|Homo sapiens SNAP-25-interacting pro... 32 3.3
AB051471-1|BAB21775.1| 762|Homo sapiens KIAA1684 protein protein. 32 3.3
AY303789-1|AAP68820.1| 113|Homo sapiens acidic ribosomal phosph... 31 7.6
AB046769-1|BAB13375.2| 1865|Homo sapiens KIAA1549 protein protein. 31 7.6
>M17887-1|AAA36472.1| 115|Homo sapiens protein ( Human acidic
ribosomal phosphoprotein P2 mRNA, complete cds. ).
Length = 115
Score = 93.9 bits (223), Expect = 7e-19
Identities = 53/110 (48%), Positives = 67/110 (60%), Gaps = 6/110 (5%)
Frame = +3
Query: 156 LAVLGGKXTPAAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLISAGREXLSSMPVG 335
LA LGG +P+A D++KIL SVGIEAD ++L KVI+ELNGK++E +I+ G L+S+P G
Sbjct: 9 LAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQGIGKLASVPAG 68
Query: 336 G------GXXXXXXXXXXXXXXXEEKKEXXKEXXXXXSESDDDMGFGLFD 467
G EEKK+ KE ESDDDMGFGLFD
Sbjct: 69 GAVAVSAAPGSAAPAAGSAPAAAEEKKDEKKE---ESEESDDDMGFGLFD 115
>CR542248-1|CAG47044.1| 115|Homo sapiens RPLP2 protein.
Length = 115
Score = 93.9 bits (223), Expect = 7e-19
Identities = 53/110 (48%), Positives = 67/110 (60%), Gaps = 6/110 (5%)
Frame = +3
Query: 156 LAVLGGKXTPAAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLISAGREXLSSMPVG 335
LA LGG +P+A D++KIL SVGIEAD ++L KVI+ELNGK++E +I+ G L+S+P G
Sbjct: 9 LAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQGIGKLASVPAG 68
Query: 336 G------GXXXXXXXXXXXXXXXEEKKEXXKEXXXXXSESDDDMGFGLFD 467
G EEKK+ KE ESDDDMGFGLFD
Sbjct: 69 GAVAVSAAPGSAAPAAGSAPAAAEEKKDEKKE---ESEESDDDMGFGLFD 115
>CR542212-1|CAG47008.1| 115|Homo sapiens RPLP2 protein.
Length = 115
Score = 93.9 bits (223), Expect = 7e-19
Identities = 53/110 (48%), Positives = 67/110 (60%), Gaps = 6/110 (5%)
Frame = +3
Query: 156 LAVLGGKXTPAAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLISAGREXLSSMPVG 335
LA LGG +P+A D++KIL SVGIEAD ++L KVI+ELNGK++E +I+ G L+S+P G
Sbjct: 9 LAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQGIGKLASVPAG 68
Query: 336 G------GXXXXXXXXXXXXXXXEEKKEXXKEXXXXXSESDDDMGFGLFD 467
G EEKK+ KE ESDDDMGFGLFD
Sbjct: 69 GAVAVSAAPGSAAPAAGSAPAAAEEKKDEKKE---ESEESDDDMGFGLFD 115
>BC062314-1|AAH62314.1| 115|Homo sapiens ribosomal protein, large,
P2 protein.
Length = 115
Score = 93.9 bits (223), Expect = 7e-19
Identities = 53/110 (48%), Positives = 67/110 (60%), Gaps = 6/110 (5%)
Frame = +3
Query: 156 LAVLGGKXTPAAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLISAGREXLSSMPVG 335
LA LGG +P+A D++KIL SVGIEAD ++L KVI+ELNGK++E +I+ G L+S+P G
Sbjct: 9 LAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQGIGKLASVPAG 68
Query: 336 G------GXXXXXXXXXXXXXXXEEKKEXXKEXXXXXSESDDDMGFGLFD 467
G EEKK+ KE ESDDDMGFGLFD
Sbjct: 69 GAVAVSAAPGSAAPAAGSAPAAAEEKKDEKKE---ESEESDDDMGFGLFD 115
>BC007573-1|AAH07573.1| 115|Homo sapiens ribosomal protein, large,
P2 protein.
Length = 115
Score = 93.9 bits (223), Expect = 7e-19
Identities = 53/110 (48%), Positives = 67/110 (60%), Gaps = 6/110 (5%)
Frame = +3
Query: 156 LAVLGGKXTPAAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLISAGREXLSSMPVG 335
LA LGG +P+A D++KIL SVGIEAD ++L KVI+ELNGK++E +I+ G L+S+P G
Sbjct: 9 LAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQGIGKLASVPAG 68
Query: 336 G------GXXXXXXXXXXXXXXXEEKKEXXKEXXXXXSESDDDMGFGLFD 467
G EEKK+ KE ESDDDMGFGLFD
Sbjct: 69 GAVAVSAAPGSAAPAAGSAPAAAEEKKDEKKE---ESEESDDDMGFGLFD 115
>BC005920-1|AAH05920.1| 115|Homo sapiens ribosomal protein, large,
P2 protein.
Length = 115
Score = 93.9 bits (223), Expect = 7e-19
Identities = 53/110 (48%), Positives = 67/110 (60%), Gaps = 6/110 (5%)
Frame = +3
Query: 156 LAVLGGKXTPAAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLISAGREXLSSMPVG 335
LA LGG +P+A D++KIL SVGIEAD ++L KVI+ELNGK++E +I+ G L+S+P G
Sbjct: 9 LAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQGIGKLASVPAG 68
Query: 336 G------GXXXXXXXXXXXXXXXEEKKEXXKEXXXXXSESDDDMGFGLFD 467
G EEKK+ KE ESDDDMGFGLFD
Sbjct: 69 GAVAVSAAPGSAAPAAGSAPAAAEEKKDEKKE---ESEESDDDMGFGLFD 115
>BC005354-1|AAH05354.1| 115|Homo sapiens ribosomal protein, large,
P2 protein.
Length = 115
Score = 93.9 bits (223), Expect = 7e-19
Identities = 53/110 (48%), Positives = 67/110 (60%), Gaps = 6/110 (5%)
Frame = +3
Query: 156 LAVLGGKXTPAAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLISAGREXLSSMPVG 335
LA LGG +P+A D++KIL SVGIEAD ++L KVI+ELNGK++E +I+ G L+S+P G
Sbjct: 9 LAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQGIGKLASVPAG 68
Query: 336 G------GXXXXXXXXXXXXXXXEEKKEXXKEXXXXXSESDDDMGFGLFD 467
G EEKK+ KE ESDDDMGFGLFD
Sbjct: 69 GAVAVSAAPGSAAPAAGSAPAAAEEKKDEKKE---ESEESDDDMGFGLFD 115
>AB061837-1|BAB79475.1| 115|Homo sapiens ribosomal protein P2
protein.
Length = 115
Score = 93.9 bits (223), Expect = 7e-19
Identities = 53/110 (48%), Positives = 67/110 (60%), Gaps = 6/110 (5%)
Frame = +3
Query: 156 LAVLGGKXTPAAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLISAGREXLSSMPVG 335
LA LGG +P+A D++KIL SVGIEAD ++L KVI+ELNGK++E +I+ G L+S+P G
Sbjct: 9 LAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQGIGKLASVPAG 68
Query: 336 G------GXXXXXXXXXXXXXXXEEKKEXXKEXXXXXSESDDDMGFGLFD 467
G EEKK+ KE ESDDDMGFGLFD
Sbjct: 69 GAVAVSAAPGSAAPAAGSAPAAAEEKKDEKKE---ESEESDDDMGFGLFD 115
>M17886-1|AAA36471.1| 114|Homo sapiens protein ( Human acidic
ribosomal phosphoprotein P1 mRNA, complete cds. ).
Length = 114
Score = 33.1 bits (72), Expect = 1.4
Identities = 17/27 (62%), Positives = 18/27 (66%)
Frame = +3
Query: 387 EEKKEXXKEXXXXXSESDDDMGFGLFD 467
EEKK K+ ESDDDMGFGLFD
Sbjct: 90 EEKKVEAKKEES--EESDDDMGFGLFD 114
>CR542209-1|CAG47005.1| 114|Homo sapiens RPLP1 protein.
Length = 114
Score = 33.1 bits (72), Expect = 1.4
Identities = 17/27 (62%), Positives = 18/27 (66%)
Frame = +3
Query: 387 EEKKEXXKEXXXXXSESDDDMGFGLFD 467
EEKK K+ ESDDDMGFGLFD
Sbjct: 90 EEKKVEAKKEES--EESDDDMGFGLFD 114
>CR450339-1|CAG29335.1| 114|Homo sapiens RPLP1 protein.
Length = 114
Score = 33.1 bits (72), Expect = 1.4
Identities = 17/27 (62%), Positives = 18/27 (66%)
Frame = +3
Query: 387 EEKKEXXKEXXXXXSESDDDMGFGLFD 467
EEKK K+ ESDDDMGFGLFD
Sbjct: 90 EEKKVEAKKEES--EESDDDMGFGLFD 114
>BC007590-1|AAH07590.1| 114|Homo sapiens ribosomal protein, large,
P1 protein.
Length = 114
Score = 33.1 bits (72), Expect = 1.4
Identities = 17/27 (62%), Positives = 18/27 (66%)
Frame = +3
Query: 387 EEKKEXXKEXXXXXSESDDDMGFGLFD 467
EEKK K+ ESDDDMGFGLFD
Sbjct: 90 EEKKVEAKKEES--EESDDDMGFGLFD 114
>BC003369-1|AAH03369.1| 114|Homo sapiens ribosomal protein, large,
P1 protein.
Length = 114
Score = 33.1 bits (72), Expect = 1.4
Identities = 17/27 (62%), Positives = 18/27 (66%)
Frame = +3
Query: 387 EEKKEXXKEXXXXXSESDDDMGFGLFD 467
EEKK K+ ESDDDMGFGLFD
Sbjct: 90 EEKKVEAKKEES--EESDDDMGFGLFD 114
>AB061836-1|BAB79474.1| 114|Homo sapiens ribosomal protein P1
protein.
Length = 114
Score = 33.1 bits (72), Expect = 1.4
Identities = 17/27 (62%), Positives = 18/27 (66%)
Frame = +3
Query: 387 EEKKEXXKEXXXXXSESDDDMGFGLFD 467
EEKK K+ ESDDDMGFGLFD
Sbjct: 90 EEKKVEAKKEES--EESDDDMGFGLFD 114
>AK126665-1|BAC86634.1| 1012|Homo sapiens protein ( Homo sapiens
cDNA FLJ44709 fis, clone BRACE3019570, highly similar
to Rattus norvegicus SNAP-25-interacting protein (SNIP).
).
Length = 1012
Score = 31.9 bits (69), Expect = 3.3
Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = +3
Query: 171 GKXTPAAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLISAGR-EXLSSMP 329
G TP V+K +S E D E+ + +T+ + KD+ +L+ + E L ++P
Sbjct: 765 GLDTPGKRSVDKAVSVEAAERDWEEKRAALTQYSAKDINRLLEETQAELLKAIP 818
>AB127405-1|BAD03968.1| 1183|Homo sapiens SNAP-25-interacting protein
protein.
Length = 1183
Score = 31.9 bits (69), Expect = 3.3
Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = +3
Query: 171 GKXTPAAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLISAGR-EXLSSMP 329
G TP V+K +S E D E+ + +T+ + KD+ +L+ + E L ++P
Sbjct: 893 GLDTPGKRSVDKAVSVEAAERDWEEKRAALTQYSAKDINRLLEETQAELLKAIP 946
>AB051471-1|BAB21775.1| 762|Homo sapiens KIAA1684 protein protein.
Length = 762
Score = 31.9 bits (69), Expect = 3.3
Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = +3
Query: 171 GKXTPAAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLISAGR-EXLSSMP 329
G TP V+K +S E D E+ + +T+ + KD+ +L+ + E L ++P
Sbjct: 472 GLDTPGKRSVDKAVSVEAAERDWEEKRAALTQYSAKDINRLLEETQAELLKAIP 525
>AY303789-1|AAP68820.1| 113|Homo sapiens acidic ribosomal
phosphoprotein P1 protein.
Length = 113
Score = 30.7 bits (66), Expect = 7.6
Identities = 16/26 (61%), Positives = 17/26 (65%)
Frame = +3
Query: 387 EEKKEXXKEXXXXXSESDDDMGFGLF 464
EEKK K+ ESDDDMGFGLF
Sbjct: 90 EEKKVEAKKEES--EESDDDMGFGLF 113
>AB046769-1|BAB13375.2| 1865|Homo sapiens KIAA1549 protein protein.
Length = 1865
Score = 30.7 bits (66), Expect = 7.6
Identities = 22/61 (36%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Frame = -1
Query: 337 PPTGIDDSXSRPAEISCSTSLPLSSVITFLSFSASASIPTELRIFSTS--AAAGVXLPPS 164
PP + S S P+E S SL LS + F S S S + T +F +S ++ + LP S
Sbjct: 561 PPLELSGSISSPSEAPASLSLMLSDLSPFTSQSFSPLVET-FTLFDSSDLQSSQLSLPSS 619
Query: 163 T 161
T
Sbjct: 620 T 620
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,142,760
Number of Sequences: 237096
Number of extensions: 936831
Number of successful extensions: 1637
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1564
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1629
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11770329464
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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