Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_P13
         (910 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U97194-7|AAB52450.2|  107|Caenorhabditis elegans Hypothetical pr...    79   3e-15
AL132865-1|CAB60595.1|  110|Caenorhabditis elegans Hypothetical ...    79   4e-15
U89307-1|AAB48625.1|  111|Caenorhabditis elegans ribosomal prote...    38   0.013
AC087079-6|AAK27864.1|  111|Caenorhabditis elegans Ribosomal pro...    37   0.017
Z79754-9|CAB02098.1|  312|Caenorhabditis elegans Hypothetical pr...    31   0.86 
Z70752-5|CAA94758.1|  901|Caenorhabditis elegans Hypothetical pr...    31   0.86 
Z70750-16|CAA94750.1|  901|Caenorhabditis elegans Hypothetical p...    31   0.86 

>U97194-7|AAB52450.2|  107|Caenorhabditis elegans Hypothetical
           protein C37A2.7 protein.
          Length = 107

 Score = 79.4 bits (187), Expect = 3e-15
 Identities = 45/105 (42%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
 Frame = +3

Query: 156 LAVLGGKXTPAAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLISAGREXLSSMPVG 335
           LA LGG  +P+A DV K+L + G++ D E    V+  L GK + ++I+ G+  LSS+P G
Sbjct: 9   LATLGGNASPSAQDVLKVLEAGGLDCDMENANSVVDALKGKTISEVIAQGKVKLSSVPSG 68

Query: 336 GGXXXXXXXXXXXXXXXEE-KKEXXKEXXXXXSESDDDMGFGLFD 467
           G                EE KKE  KE      ESDDDMGFGLFD
Sbjct: 69  GSAPAAAAPSGGAAPKAEEKKKEEPKE------ESDDDMGFGLFD 107


>AL132865-1|CAB60595.1|  110|Caenorhabditis elegans Hypothetical
           protein Y62E10A.1 protein.
          Length = 110

 Score = 79.0 bits (186), Expect = 4e-15
 Identities = 45/104 (43%), Positives = 56/104 (53%)
 Frame = +3

Query: 156 LAVLGGKXTPAAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLISAGREXLSSMPVG 335
           LAVLGG   P   D++ ILS+VG++ADAE  K V++ L GK VE+LI+ G   L S+  G
Sbjct: 9   LAVLGGNANPKVDDLKNILSAVGVDADAETAKLVVSRLAGKTVEELIAEGSAGLVSVSGG 68

Query: 336 GGXXXXXXXXXXXXXXXEEKKEXXKEXXXXXSESDDDMGFGLFD 467
                             + K   KE      ESDDDMGFGLFD
Sbjct: 69  AAPAAAAAPAAGGAAPAADSKPAKKE--EPKEESDDDMGFGLFD 110


>U89307-1|AAB48625.1|  111|Caenorhabditis elegans ribosomal protein
           P1 homolog protein.
          Length = 111

 Score = 37.5 bits (83), Expect = 0.013
 Identities = 27/90 (30%), Positives = 36/90 (40%)
 Frame = +3

Query: 198 VEKILSSVGIEADAEKLKKVITELNGKDVEQLISAGREXLSSMPVGGGXXXXXXXXXXXX 377
           +  +L +  +E +          L G DV+ LI++      S P                
Sbjct: 28  IATLLKAANVEFEPNWPGLFAKALEGVDVKNLITSVSSGAGSGPAPAAAAAAPAAGGAAP 87

Query: 378 XXXEEKKEXXKEXXXXXSESDDDMGFGLFD 467
               +KKE  KE      ESDDDMGFGLFD
Sbjct: 88  AAETKKKEEPKE------ESDDDMGFGLFD 111


>AC087079-6|AAK27864.1|  111|Caenorhabditis elegans Ribosomal
           protein, acidic protein 1 protein.
          Length = 111

 Score = 37.1 bits (82), Expect = 0.017
 Identities = 25/67 (37%), Positives = 29/67 (43%)
 Frame = +3

Query: 267 LNGKDVEQLISAGREXLSSMPVGGGXXXXXXXXXXXXXXXEEKKEXXKEXXXXXSESDDD 446
           L G DV+ LI++      S P                    +KKE  KE      ESDDD
Sbjct: 51  LEGVDVKNLITSVSSGAGSGPAPAAAAAAPAAGGAAPAAETKKKEEPKE------ESDDD 104

Query: 447 MGFGLFD 467
           MGFGLFD
Sbjct: 105 MGFGLFD 111


>Z79754-9|CAB02098.1|  312|Caenorhabditis elegans Hypothetical
           protein F25H2.10 protein.
          Length = 312

 Score = 31.5 bits (68), Expect = 0.86
 Identities = 17/25 (68%), Positives = 17/25 (68%)
 Frame = +3

Query: 393 KKEXXKEXXXXXSESDDDMGFGLFD 467
           KKE  KE      ESDDDMGFGLFD
Sbjct: 294 KKEEPKE------ESDDDMGFGLFD 312


>Z70752-5|CAA94758.1|  901|Caenorhabditis elegans Hypothetical
           protein F25B3.1 protein.
          Length = 901

 Score = 31.5 bits (68), Expect = 0.86
 Identities = 16/40 (40%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
 Frame = +3

Query: 180 TPAAADVEKILSSVGIEADAEKLKKVITEL-NGKDVEQLI 296
           TPA+A   +I  + GI    EK+  +ITE+ N KD+E+ +
Sbjct: 445 TPASASDHRISRTFGINESEEKVVAMITEIRNQKDLEEAV 484


>Z70750-16|CAA94750.1|  901|Caenorhabditis elegans Hypothetical
           protein F25B3.1 protein.
          Length = 901

 Score = 31.5 bits (68), Expect = 0.86
 Identities = 16/40 (40%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
 Frame = +3

Query: 180 TPAAADVEKILSSVGIEADAEKLKKVITEL-NGKDVEQLI 296
           TPA+A   +I  + GI    EK+  +ITE+ N KD+E+ +
Sbjct: 445 TPASASDHRISRTFGINESEEKVVAMITEIRNQKDLEEAV 484


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,717,372
Number of Sequences: 27780
Number of extensions: 147835
Number of successful extensions: 349
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 341
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 347
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2318293978
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)