Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP02_F_P12
(916 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62841 Cluster: 40S ribosomal protein S15; n=46; cellul... 196 7e-49
UniRef50_Q01855 Cluster: 40S ribosomal protein S15; n=140; Eukar... 153 6e-36
UniRef50_Q9FML6 Cluster: 40S ribosomal protein S15-6; n=9; Eukar... 143 6e-33
UniRef50_Q7QTT8 Cluster: GLP_191_11250_10813; n=1; Giardia lambl... 117 4e-25
UniRef50_UPI00006CD29C Cluster: hypothetical protein TTHERM_0026... 110 4e-23
UniRef50_Q975I5 Cluster: 30S ribosomal protein S19P; n=8; Archae... 108 2e-22
UniRef50_Q9HIR3 Cluster: 30S ribosomal protein S19P; n=8; Euryar... 103 5e-21
UniRef50_Q3LWF2 Cluster: Ribosomal protein L15; n=1; Bigelowiell... 103 6e-21
UniRef50_P15010 Cluster: 30S ribosomal protein S19P; n=5; Euryar... 101 3e-20
UniRef50_A2DVD8 Cluster: Ribosomal protein S19, putative; n=1; T... 100 4e-20
UniRef50_Q8ZWL4 Cluster: 30S ribosomal protein S19P; n=7; Archae... 100 4e-20
UniRef50_Q6LX07 Cluster: 30S ribosomal protein S19P; n=9; Euryar... 100 6e-20
UniRef50_Q8SRE7 Cluster: RIBOSOMAL PROTEIN S15; n=1; Encephalito... 99 1e-19
UniRef50_Q74MZ5 Cluster: 30S ribosomal protein S19P; n=1; Nanoar... 95 3e-18
UniRef50_Q8PV46 Cluster: 30S ribosomal protein S19P; n=9; Archae... 93 1e-17
UniRef50_Q2QAS7 Cluster: Ribosomal protein S19; n=3; Archaea|Rep... 89 2e-16
UniRef50_UPI0000DD8522 Cluster: PREDICTED: similar to 40S riboso... 87 4e-16
UniRef50_Q00XN5 Cluster: Homology to unknown gene; n=2; Ostreoco... 86 1e-15
UniRef50_A7QFV7 Cluster: Chromosome undetermined scaffold_89, wh... 66 2e-09
UniRef50_P94271 Cluster: 30S ribosomal protein S19; n=66; cellul... 60 6e-08
UniRef50_Q8M1F9 Cluster: Ribosomal protein S19; n=1; Chaetosphae... 56 2e-06
UniRef50_O66435 Cluster: 30S ribosomal protein S19; n=32; Bacter... 55 2e-06
UniRef50_Q9AIN5 Cluster: Ribosomal protein S19; n=1; Candidatus ... 55 3e-06
UniRef50_Q4URE3 Cluster: 30S ribosomal protein S19; n=18; cellul... 55 3e-06
UniRef50_A6S058 Cluster: Mitochondrial ribosome small subunit co... 54 7e-06
UniRef50_UPI00015BD7EF Cluster: UPI00015BD7EF related cluster; n... 53 9e-06
UniRef50_A6QU02 Cluster: Predicted protein; n=1; Ajellomyces cap... 53 1e-05
UniRef50_Q9US30 Cluster: Probable mitochondrial ribosomal protei... 52 2e-05
UniRef50_P56808 Cluster: Chloroplast 30S ribosomal protein S19; ... 52 3e-05
UniRef50_P0A4B5 Cluster: 30S ribosomal protein S19; n=47; Bacter... 51 4e-05
UniRef50_Q2GUS0 Cluster: Putative uncharacterized protein; n=1; ... 49 1e-04
UniRef50_Q5GSU8 Cluster: Ribosomal protein S19; n=10; Rickettsia... 49 2e-04
UniRef50_Q8D208 Cluster: 30S ribosomal protein S19; n=14; cellul... 49 2e-04
UniRef50_P0A7U6 Cluster: 30S ribosomal protein S19; n=263; cellu... 49 2e-04
UniRef50_Q8LWZ8 Cluster: Ribosomal protein S19; n=16; stramenopi... 48 3e-04
UniRef50_Q2EEV9 Cluster: Ribosomal protein S19; n=1; Helicospori... 48 3e-04
UniRef50_Q6A6N0 Cluster: 30S ribosomal protein S19; n=75; cellul... 48 3e-04
UniRef50_P53733 Cluster: Mitochondrial 37S ribosomal protein S19... 48 3e-04
UniRef50_P50893 Cluster: Mitochondrial ribosomal protein S19; n=... 48 3e-04
UniRef50_Q9G868 Cluster: Ribosomal protein S19; n=2; Eukaryota|R... 48 4e-04
UniRef50_Q6YR17 Cluster: 30S ribosomal protein S19; n=72; cellul... 48 4e-04
UniRef50_A1DE43 Cluster: Mitochondrial ribosomal protein S19, pu... 47 6e-04
UniRef50_P39697 Cluster: 40S ribosomal protein S19, mitochondria... 47 6e-04
UniRef50_P26874 Cluster: Mitochondrial ribosomal protein S19; n=... 46 0.001
UniRef50_A6YEB0 Cluster: Ribosomal protein S19; n=1; Chlorokybus... 46 0.001
UniRef50_Q6CDN4 Cluster: Yarrowia lipolytica chromosome B of str... 46 0.002
UniRef50_Q0CW10 Cluster: Putative uncharacterized protein; n=1; ... 45 0.002
UniRef50_Q9TAJ3 Cluster: Ribosomal protein S19; n=1; Cafeteria r... 44 0.005
UniRef50_A6BM61 Cluster: Ribosomal protein S19; n=1; Gnetum parv... 42 0.017
UniRef50_Q6E790 Cluster: Ribosomal protein S19; n=6; Oomycetes|R... 42 0.022
UniRef50_P0C478 Cluster: Chloroplast 30S ribosomal protein S19; ... 41 0.038
UniRef50_P34772 Cluster: Plastid 30S ribosomal protein S19; n=1;... 41 0.038
UniRef50_Q6UVU3 Cluster: Ribosomal protein S19; n=1; Pseudendocl... 40 0.067
UniRef50_Q23889 Cluster: Ribosomal protein S19; n=2; Dictyosteli... 40 0.089
UniRef50_Q06FM4 Cluster: Ribosomal protein S19; n=1; Pelargonium... 40 0.12
UniRef50_A7QBJ9 Cluster: Chromosome chr13 scaffold_74, whole gen... 40 0.12
UniRef50_Q0QIR8 Cluster: Ribosomal protein S19; n=1; Oltmannsiel... 39 0.15
UniRef50_A2DH24 Cluster: Putative uncharacterized protein; n=1; ... 35 2.5
UniRef50_Q6HT65 Cluster: ComE operon protein 1; n=22; Bacillus|R... 34 4.4
UniRef50_Q9G8T6 Cluster: Ribosomal protein S19; n=1; Rhodomonas ... 34 4.4
UniRef50_Q8IB15 Cluster: Putative uncharacterized protein MAL8P1... 33 7.7
>UniRef50_P62841 Cluster: 40S ribosomal protein S15; n=46; cellular
organisms|Rep: 40S ribosomal protein S15 - Homo sapiens
(Human)
Length = 145
Score = 196 bits (478), Expect = 7e-49
Identities = 91/120 (75%), Positives = 103/120 (85%)
Frame = +1
Query: 166 LXMPNEQLMELMHXXXXXXXXXGLKRKPMALVKKLRRAKKEAPPNEKPEIVKTHLRNMII 345
L M EQLM+L GL+RK +L+K+LR+AKKEAPP EKPE+VKTHLR+MII
Sbjct: 26 LDMSYEQLMQLYSARQRRRLNRGLRRKQHSLLKRLRKAKKEAPPMEKPEVVKTHLRDMII 85
Query: 346 VPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGRPGIGATHSSRFIPLK 525
+PEMVGS+VG+YNGKTFNQVEIKPEMIGHYLGEFS+TYKPVKHGRPGIGATHSSRFIPLK
Sbjct: 86 LPEMVGSMVGVYNGKTFNQVEIKPEMIGHYLGEFSITYKPVKHGRPGIGATHSSRFIPLK 145
Score = 43.2 bits (97), Expect = 0.010
Identities = 19/20 (95%), Positives = 19/20 (95%)
Frame = +3
Query: 108 KKKRIFRKFTYRGVDLDQLL 167
KKKR FRKFTYRGVDLDQLL
Sbjct: 7 KKKRTFRKFTYRGVDLDQLL 26
>UniRef50_Q01855 Cluster: 40S ribosomal protein S15; n=140;
Eukaryota|Rep: 40S ribosomal protein S15 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 142
Score = 153 bits (371), Expect = 6e-36
Identities = 79/140 (56%), Positives = 95/140 (67%)
Frame = +1
Query: 106 SRKSVFSGSSLTGELISISSLXMPNEQLMELMHXXXXXXXXXGLKRKPMALVKKLRRAKK 285
++K VF S G + L M E ++L G+ KP +KKLR AK
Sbjct: 7 AKKRVFKTHSYRGVDLE-KLLEMSTEDFVKLAPARVRRRFARGMTSKPAGFMKKLRAAKL 65
Query: 286 EAPPNEKPEIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKP 465
AP NEKP V+TH+RNMIIVPEM+GS+VGIYNGK FNQVEI+PEM+GHYLGEFS+TY P
Sbjct: 66 AAPENEKPAPVRTHMRNMIIVPEMIGSVVGIYNGKAFNQVEIRPEMLGHYLGEFSITYTP 125
Query: 466 VKHGRPGIGATHSSRFIPLK 525
V+HGR GAT +SRFIPLK
Sbjct: 126 VRHGR--AGAT-TSRFIPLK 142
>UniRef50_Q9FML6 Cluster: 40S ribosomal protein S15-6; n=9;
Eukaryota|Rep: 40S ribosomal protein S15-6 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 160
Score = 143 bits (346), Expect = 6e-33
Identities = 76/146 (52%), Positives = 96/146 (65%), Gaps = 6/146 (4%)
Frame = +1
Query: 106 SRKSVFSGSSLTGELISISSLXMPNEQLMELMHXXXXXXXXXGLKRKPMALVKKLRRAKK 285
++K F S G + + L M N L +L + GLK++P+ L+KKLRRAKK
Sbjct: 16 TKKRTFKKFSFRGFNVD-ALLKMSNVDLAKLFNARVRRRFYRGLKKQPLILIKKLRRAKK 74
Query: 286 EAPPNEK--PEIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTY 459
EA K PE+VKTHLRNMIIVPEM+GS+VG++NGK FN++ IKPEMIGHYL EFS+T
Sbjct: 75 EASDENKMKPEVVKTHLRNMIIVPEMIGSVVGVHNGKKFNEIVIKPEMIGHYLAEFSMTC 134
Query: 460 KPVKHGRPGIGA----THSSRFIPLK 525
K V H RP I S+RFIPL+
Sbjct: 135 KKVNHHRPRICGCCCFRRSTRFIPLR 160
>UniRef50_Q7QTT8 Cluster: GLP_191_11250_10813; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_191_11250_10813 - Giardia lamblia
ATCC 50803
Length = 145
Score = 117 bits (282), Expect = 4e-25
Identities = 54/98 (55%), Positives = 73/98 (74%)
Frame = +1
Query: 232 GLKRKPMALVKKLRRAKKEAPPNEKPEIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEI 411
GL K + V KLR ++ A P++KP+IV+THLR+MII PEM+G V +YNG+ F VEI
Sbjct: 49 GLSMKHLRFVNKLR-LRRAAQPSQKPKIVRTHLRDMIIFPEMIGMTVSVYNGRQFIPVEI 107
Query: 412 KPEMIGHYLGEFSVTYKPVKHGRPGIGATHSSRFIPLK 525
KP M+G L E+S++YK V HG+ GIGAT SS+F+PL+
Sbjct: 108 KPPMVGRALREYSMSYKIVSHGKVGIGATRSSKFVPLR 145
>UniRef50_UPI00006CD29C Cluster: hypothetical protein
TTHERM_00266390; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00266390 - Tetrahymena
thermophila SB210
Length = 144
Score = 110 bits (265), Expect = 4e-23
Identities = 57/133 (42%), Positives = 80/133 (60%), Gaps = 4/133 (3%)
Frame = +1
Query: 100 KPSRKSVFSGSSLTGELISISS----LXMPNEQLMELMHXXXXXXXXXGLKRKPMALVKK 267
K +K F G L EL +++S + +++L L G+ K V K
Sbjct: 6 KSIKKFTFRGKGLE-ELTALASGSNSEKLISDELAALFDAKTRRRVKRGISEKYAKFVNK 64
Query: 268 LRRAKKEAPPNEKPEIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEF 447
+RR+K++ P EKP VKTH R+MI++PE+VG IVG+YNGK F VE+K +MIG YL EF
Sbjct: 65 VRRSKEKCPAGEKPVPVKTHYRSMIVIPELVGGIVGVYNGKEFVNVEVKFDMIGKYLAEF 124
Query: 448 SVTYKPVKHGRPG 486
++TYKP HG+ G
Sbjct: 125 AMTYKPTTHGKTG 137
>UniRef50_Q975I5 Cluster: 30S ribosomal protein S19P; n=8;
Archaea|Rep: 30S ribosomal protein S19P - Sulfolobus
tokodaii
Length = 140
Score = 108 bits (260), Expect = 2e-22
Identities = 52/120 (43%), Positives = 77/120 (64%)
Frame = +1
Query: 166 LXMPNEQLMELMHXXXXXXXXXGLKRKPMALVKKLRRAKKEAPPNEKPEIVKTHLRNMII 345
L MP ++ ++L+ G K L++K+R+ +E + + +KTH+R+MII
Sbjct: 23 LNMPMDEFIKLLPSRQRRSLKKGFSDKQRRLLEKIRKYVREG---KYSKTIKTHVRDMII 79
Query: 346 VPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGRPGIGATHSSRFIPLK 525
+PEMVG +YNGK F + ++ PEMIGHYLGEFS+T K V+HG PG+ AT SS F+ +K
Sbjct: 80 LPEMVGLKFAVYNGKEFVEFQVVPEMIGHYLGEFSITTKKVEHGEPGLKATRSSLFLAMK 139
>UniRef50_Q9HIR3 Cluster: 30S ribosomal protein S19P; n=8;
Euryarchaeota|Rep: 30S ribosomal protein S19P -
Thermoplasma acidophilum
Length = 151
Score = 103 bits (248), Expect = 5e-21
Identities = 46/72 (63%), Positives = 58/72 (80%)
Frame = +1
Query: 310 EIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGRPGI 489
E VKTH+R++II+P VG IV +YNG ++ + EIKPEMIGHYLGEF +T K VKH PG+
Sbjct: 80 EDVKTHVRDVIILPNYVGKIVEVYNGNSYFKFEIKPEMIGHYLGEFVMTRKEVKHSGPGV 139
Query: 490 GATHSSRFIPLK 525
GAT SS+F+PLK
Sbjct: 140 GATRSSKFMPLK 151
>UniRef50_Q3LWF2 Cluster: Ribosomal protein L15; n=1; Bigelowiella
natans|Rep: Ribosomal protein L15 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 151
Score = 103 bits (247), Expect = 6e-21
Identities = 42/70 (60%), Positives = 57/70 (81%)
Frame = +1
Query: 316 VKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGRPGIGA 495
+KTH+RN II P M+ + +YNG +++ +E++ M+G +LGEFS+TYKPVKHG PGIGA
Sbjct: 82 LKTHVRNCIITPSMINKKIYVYNGNSYSYIELQTLMLGKFLGEFSLTYKPVKHGNPGIGA 141
Query: 496 THSSRFIPLK 525
THSSRFIPL+
Sbjct: 142 THSSRFIPLR 151
>UniRef50_P15010 Cluster: 30S ribosomal protein S19P; n=5;
Euryarchaeota|Rep: 30S ribosomal protein S19P -
Halobacterium salinarium (Halobacterium halobium)
Length = 140
Score = 101 bits (241), Expect = 3e-20
Identities = 49/118 (41%), Positives = 71/118 (60%)
Frame = +1
Query: 172 MPNEQLMELMHXXXXXXXXXGLKRKPMALVKKLRRAKKEAPPNEKPEIVKTHLRNMIIVP 351
M E + EL+ GL + ++ + R + E N ++THLR+M ++P
Sbjct: 26 MSLEDVAELLPARQRRTITRGLSEEHHKVLAEARESGTEETANNP---IRTHLRDMPVLP 82
Query: 352 EMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGRPGIGATHSSRFIPLK 525
E VG +Y G+ F +VE++PEMIGHYLGEF +T V+HG+ GIGAT SS+F+PLK
Sbjct: 83 EFVGLTFAVYTGQEFERVEVQPEMIGHYLGEFQLTRSSVEHGQAGIGATRSSKFVPLK 140
>UniRef50_A2DVD8 Cluster: Ribosomal protein S19, putative; n=1;
Trichomonas vaginalis G3|Rep: Ribosomal protein S19,
putative - Trichomonas vaginalis G3
Length = 144
Score = 100 bits (240), Expect = 4e-20
Identities = 46/96 (47%), Positives = 69/96 (71%), Gaps = 2/96 (2%)
Frame = +1
Query: 244 KPMALVKKLRRAKK--EAPPNEKPEIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIKP 417
K + L++KL++A++ E +P +VKTHLR+M+I+PE V +++GIY+G F +V+IKP
Sbjct: 49 KHVHLIEKLKKARQAVEGQAGVRPPVVKTHLRHMVILPEFVDNVIGIYDGHVFFEVQIKP 108
Query: 418 EMIGHYLGEFSVTYKPVKHGRPGIGATHSSRFIPLK 525
EMIGH L +F+ + K VKH + G+GAT SS LK
Sbjct: 109 EMIGHVLADFAPSKKVVKHSKAGVGATRSSSATSLK 144
>UniRef50_Q8ZWL4 Cluster: 30S ribosomal protein S19P; n=7;
Archaea|Rep: 30S ribosomal protein S19P - Pyrobaculum
aerophilum
Length = 158
Score = 100 bits (240), Expect = 4e-20
Identities = 52/120 (43%), Positives = 76/120 (63%)
Frame = +1
Query: 166 LXMPNEQLMELMHXXXXXXXXXGLKRKPMALVKKLRRAKKEAPPNEKPEIVKTHLRNMII 345
L M ++ ++L+ GLK + L++K+R+AK+ A +K +++TH R+MII
Sbjct: 40 LNMSMDEFIKLLPARQRRSLKRGLKPEHRKLLEKIRKAKRLAAQGKKV-VIRTHCRDMII 98
Query: 346 VPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGRPGIGATHSSRFIPLK 525
+PEMVG + +YNG T+ V I P IGHYLGEF++T K V+HG PG+ AT SS I K
Sbjct: 99 LPEMVGLTIHVYNGITYIPVFISPWHIGHYLGEFALTTKIVQHGEPGLKATRSSLHIAAK 158
>UniRef50_Q6LX07 Cluster: 30S ribosomal protein S19P; n=9;
Euryarchaeota|Rep: 30S ribosomal protein S19P -
Methanococcus maripaludis
Length = 161
Score = 100 bits (239), Expect = 6e-20
Identities = 43/118 (36%), Positives = 71/118 (60%)
Frame = +1
Query: 172 MPNEQLMELMHXXXXXXXXXGLKRKPMALVKKLRRAKKEAPPNEKPEIVKTHLRNMIIVP 351
MP ++ ME++ G+ K LV K+++A++ + +++TH R+ +I P
Sbjct: 44 MPIKKFMEIVPSRQRRTMARGITPKQRKLVMKIKKARRLTNRGKDARVIRTHCRDFVITP 103
Query: 352 EMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGRPGIGATHSSRFIPLK 525
EM+G GIYNGK F ++++ E +G +LGE + T V+HG PG+GAT S F+P+K
Sbjct: 104 EMIGLTFGIYNGKEFKEIKLVEETVGRFLGEMAPTRGVVQHGSPGMGATRGSMFVPIK 161
>UniRef50_Q8SRE7 Cluster: RIBOSOMAL PROTEIN S15; n=1;
Encephalitozoon cuniculi|Rep: RIBOSOMAL PROTEIN S15 -
Encephalitozoon cuniculi
Length = 149
Score = 99.1 bits (236), Expect = 1e-19
Identities = 50/119 (42%), Positives = 72/119 (60%), Gaps = 1/119 (0%)
Frame = +1
Query: 172 MPNEQLMELMHXXXXXXXXXGLKRKPMALVKKLRRAKKEA-PPNEKPEIVKTHLRNMIIV 348
MP ++ +L GL + + L+K AK + KPE+V+TH R+ II
Sbjct: 31 MPFSEVAKLFPSRLRRRVRRGLSSREVELIKGCIAAKAACVSSSSKPEMVRTHARSAIIW 90
Query: 349 PEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGRPGIGATHSSRFIPLK 525
P M+G++VG++ G + VEIKPEM+G L +F+ T KHGRPGIGA+ SS+F+PLK
Sbjct: 91 PAMIGALVGVHVGNGYLPVEIKPEMVGFVLSDFAPTRVTPKHGRPGIGASSSSKFVPLK 149
Score = 33.9 bits (74), Expect = 5.8
Identities = 13/23 (56%), Positives = 19/23 (82%)
Frame = +3
Query: 96 DETLKKKRIFRKFTYRGVDLDQL 164
+E KKKR FR++TYRGV +++L
Sbjct: 6 NEVSKKKRTFRRYTYRGVPVEEL 28
>UniRef50_Q74MZ5 Cluster: 30S ribosomal protein S19P; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S19P -
Nanoarchaeum equitans
Length = 140
Score = 94.7 bits (225), Expect = 3e-18
Identities = 51/90 (56%), Positives = 60/90 (66%)
Frame = +1
Query: 256 LVKKLRRAKKEAPPNEKPEIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHY 435
L KK+ AK+ +KP +KTH RN II+P MVG V +YNGK + V+IKPEMIGHY
Sbjct: 55 LFKKILLAKEGK--YKKP--IKTHARNTIILPFMVGVTVHVYNGKEYVPVQIKPEMIGHY 110
Query: 436 LGEFSVTYKPVKHGRPGIGATHSSRFIPLK 525
LGEFS T K KH PGIGAT SS + K
Sbjct: 111 LGEFSFTTKRPKHSAPGIGATRSSAHVSKK 140
>UniRef50_Q8PV46 Cluster: 30S ribosomal protein S19P; n=9;
Archaea|Rep: 30S ribosomal protein S19P - Methanosarcina
mazei (Methanosarcina frisia)
Length = 136
Score = 92.7 bits (220), Expect = 1e-17
Identities = 39/70 (55%), Positives = 53/70 (75%)
Frame = +1
Query: 316 VKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGRPGIGA 495
++TH R+MII+PEM+G + ++NGK F VE++PEMIGH GEF+ T V HG G+GA
Sbjct: 67 IRTHHRDMIILPEMIGIAIEVHNGKEFVNVELQPEMIGHRFGEFAPTRSRVNHGSAGVGA 126
Query: 496 THSSRFIPLK 525
T SS+F+PLK
Sbjct: 127 TRSSKFVPLK 136
>UniRef50_Q2QAS7 Cluster: Ribosomal protein S19; n=3; Archaea|Rep:
Ribosomal protein S19 - uncultured marine group II
euryarchaeote HF70_59C08
Length = 173
Score = 88.6 bits (210), Expect = 2e-16
Identities = 39/76 (51%), Positives = 55/76 (72%), Gaps = 1/76 (1%)
Frame = +1
Query: 301 EKP-EIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHG 477
E P + +KTH R++ I+PEMVG +G+++G+ F VEI PEMIGH LGE++ T + V H
Sbjct: 98 ENPGKTIKTHCRSLYILPEMVGRTIGVHDGRAFKMVEILPEMIGHALGEYASTRRSVTHT 157
Query: 478 RPGIGATHSSRFIPLK 525
PG+GAT SS+ + LK
Sbjct: 158 GPGVGATRSSKHVALK 173
>UniRef50_UPI0000DD8522 Cluster: PREDICTED: similar to 40S ribosomal
protein S15 (RIG protein); n=2; Homo sapiens|Rep:
PREDICTED: similar to 40S ribosomal protein S15 (RIG
protein) - Homo sapiens
Length = 134
Score = 87.4 bits (207), Expect = 4e-16
Identities = 38/60 (63%), Positives = 51/60 (85%)
Frame = +1
Query: 232 GLKRKPMALVKKLRRAKKEAPPNEKPEIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEI 411
GL RK +L+K+LR+AKK APP EKPE+VKTH R+++++P MVGS VG+Y+GKTF QVE+
Sbjct: 67 GLWRKQRSLLKRLRKAKKGAPPTEKPEVVKTHPRDVLLLPAMVGSTVGVYDGKTFKQVEM 126
Score = 34.7 bits (76), Expect = 3.3
Identities = 15/20 (75%), Positives = 17/20 (85%)
Frame = +3
Query: 108 KKKRIFRKFTYRGVDLDQLL 167
+KK+ FR FT RGVDLDQLL
Sbjct: 20 QKKQTFRNFTQRGVDLDQLL 39
>UniRef50_Q00XN5 Cluster: Homology to unknown gene; n=2;
Ostreococcus|Rep: Homology to unknown gene -
Ostreococcus tauri
Length = 561
Score = 86.2 bits (204), Expect = 1e-15
Identities = 52/89 (58%), Positives = 55/89 (61%)
Frame = -3
Query: 527 YLSGMNLELCVAPIPGLPCFTGLYVTENSPR*WPIISGLISTWLKVFPL*MPTIEPTISG 348
YLSGMNLE P PC TG YV SPR PIISGLIST L PL PT EPTISG
Sbjct: 11 YLSGMNLE---PERPARPCETGRYVIAYSPRYDPIISGLISTVLNTLPLYTPTTEPTISG 67
Query: 347 TMIMFLK*VFTISGFSFGGASFLARRSFL 261
M M + V T+SGFS + LA RSFL
Sbjct: 68 MMGMLRRCVRTVSGFSIPTTAALALRSFL 96
>UniRef50_A7QFV7 Cluster: Chromosome undetermined scaffold_89, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_89, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 319
Score = 65.7 bits (153), Expect = 2e-09
Identities = 33/62 (53%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Frame = +1
Query: 268 LRRAKKEAPPNEKPEIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEI-KPEMIGHYLGE 444
L+ + + P+E P+ + HL NMIIV EM+G IVG+YNGKT NQV I KP+ I HYL
Sbjct: 11 LKTKTRGSIPSENPKQTRIHLYNMIIVLEMIGYIVGVYNGKTLNQVGILKPKKICHYLTS 70
Query: 445 FS 450
S
Sbjct: 71 LS 72
>UniRef50_P94271 Cluster: 30S ribosomal protein S19; n=66; cellular
organisms|Rep: 30S ribosomal protein S19 - Borrelia
burgdorferi (Lyme disease spirochete)
Length = 92
Score = 60.5 bits (140), Expect = 6e-08
Identities = 29/74 (39%), Positives = 46/74 (62%)
Frame = +1
Query: 235 LKRKPMALVKKLRRAKKEAPPNEKPEIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIK 414
+K+ P + K L + + +EK ++KT+ R+ I+PEMV + +YNGKTF + I
Sbjct: 5 IKKGPF-IEKSLYQKVLSSFGSEKRVVIKTYSRSSTIIPEMVSLTISVYNGKTFIPIYIT 63
Query: 415 PEMIGHYLGEFSVT 456
+++GH LGEFS T
Sbjct: 64 EDLVGHKLGEFSPT 77
>UniRef50_Q8M1F9 Cluster: Ribosomal protein S19; n=1;
Chaetosphaeridium globosum|Rep: Ribosomal protein S19 -
Chaetosphaeridium globosum
Length = 114
Score = 55.6 bits (128), Expect = 2e-06
Identities = 29/78 (37%), Positives = 45/78 (57%), Gaps = 2/78 (2%)
Frame = +1
Query: 244 KPMALVKKLRR--AKKEAPPNEKPEIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIKP 417
+PM +L+R + ++A + + K R I+P+ VG+IV +YNGK F ++I
Sbjct: 23 RPMGEDTRLKREGSTEQAFVTKSSSLQKIWSRRSCILPQFVGNIVSVYNGKNFVNLKITD 82
Query: 418 EMIGHYLGEFSVTYKPVK 471
EM+GH GEF+ T K K
Sbjct: 83 EMVGHKYGEFASTRKIAK 100
>UniRef50_O66435 Cluster: 30S ribosomal protein S19; n=32;
Bacteria|Rep: 30S ribosomal protein S19 - Aquifex
aeolicus
Length = 219
Score = 55.2 bits (127), Expect = 2e-06
Identities = 26/61 (42%), Positives = 39/61 (63%)
Frame = +1
Query: 274 RAKKEAPPNEKPEIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSV 453
R +K E+ ++V+T+ R I+PE VG + ++NGKTF V I +M+GH LGEF+
Sbjct: 143 RIRKMNETGER-KVVRTYSRATTIIPEFVGHTIAVHNGKTFVPVYITQDMVGHKLGEFAP 201
Query: 454 T 456
T
Sbjct: 202 T 202
>UniRef50_Q9AIN5 Cluster: Ribosomal protein S19; n=1; Candidatus
Carsonella ruddii|Rep: Ribosomal protein S19 -
Carsonella ruddii
Length = 88
Score = 54.8 bits (126), Expect = 3e-06
Identities = 26/54 (48%), Positives = 35/54 (64%)
Frame = +1
Query: 319 KTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGR 480
KT RN I+P+M+G + ++NGK FN+V I EMIG+ LGEFS T H +
Sbjct: 25 KTWSRNSTIIPKMIGLNIFVHNGKKFNKVYIIEEMIGYKLGEFSFTKNFKSHSK 78
>UniRef50_Q4URE3 Cluster: 30S ribosomal protein S19; n=18; cellular
organisms|Rep: 30S ribosomal protein S19 - Xanthomonas
campestris pv. campestris (strain 8004)
Length = 89
Score = 54.8 bits (126), Expect = 3e-06
Identities = 31/81 (38%), Positives = 46/81 (56%)
Frame = +1
Query: 235 LKRKPMALVKKLRRAKKEAPPNEKPEIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIK 414
LK+ P + L + + A ++KP +KT R +I+PEMVG + ++NGK V +
Sbjct: 5 LKKGPF-VDHHLAKKVESAAGSKKP--IKTWSRRSMILPEMVGITIAVHNGKNHIPVLVN 61
Query: 415 PEMIGHYLGEFSVTYKPVKHG 477
M+GH LGEF+VT HG
Sbjct: 62 ENMVGHKLGEFAVTRTFKGHG 82
>UniRef50_A6S058 Cluster: Mitochondrial ribosome small subunit
component S19; n=2; Sclerotiniaceae|Rep: Mitochondrial
ribosome small subunit component S19 - Botryotinia
fuckeliana B05.10
Length = 93
Score = 53.6 bits (123), Expect = 7e-06
Identities = 23/49 (46%), Positives = 32/49 (65%)
Frame = +1
Query: 316 VKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYK 462
++T R+ I+P VG I+NGK +N+V I +M+GH LGEFS T K
Sbjct: 35 IRTQARSATILPNFVGLTFEIHNGKVYNEVTITEDMVGHKLGEFSATRK 83
>UniRef50_UPI00015BD7EF Cluster: UPI00015BD7EF related cluster; n=1;
unknown|Rep: UPI00015BD7EF UniRef100 entry - unknown
Length = 153
Score = 53.2 bits (122), Expect = 9e-06
Identities = 21/49 (42%), Positives = 34/49 (69%)
Frame = +1
Query: 310 EIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVT 456
++VKT+ R+ ++ + V + ++NGKTF + I PEM+GH LGEF+ T
Sbjct: 88 KVVKTYSRDSQVISDFVNHTIAVHNGKTFVPIYITPEMVGHKLGEFAPT 136
>UniRef50_A6QU02 Cluster: Predicted protein; n=1; Ajellomyces
capsulatus NAm1|Rep: Predicted protein - Ajellomyces
capsulatus NAm1
Length = 144
Score = 52.8 bits (121), Expect = 1e-05
Identities = 24/53 (45%), Positives = 32/53 (60%)
Frame = +1
Query: 292 PPNEKPEIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFS 450
PP +KT R+ I+P VG ++NGKT+N+V I EM+G LGEFS
Sbjct: 2 PPPPGTPAIKTQARSATILPNFVGLKFAVHNGKTYNEVFITDEMVGRKLGEFS 54
>UniRef50_Q9US30 Cluster: Probable mitochondrial ribosomal protein
S19; n=1; Schizosaccharomyces pombe|Rep: Probable
mitochondrial ribosomal protein S19 -
Schizosaccharomyces pombe (Fission yeast)
Length = 108
Score = 52.0 bits (119), Expect = 2e-05
Identities = 23/49 (46%), Positives = 35/49 (71%)
Frame = +1
Query: 316 VKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYK 462
+KT +R+ I+P MVG+ ++NGK++ V+I +MIGH LGEF+ T K
Sbjct: 50 IKTAVRSATILPRMVGAQFMVHNGKSYANVKITEDMIGHKLGEFAPTRK 98
>UniRef50_P56808 Cluster: Chloroplast 30S ribosomal protein S19;
n=326; cellular organisms|Rep: Chloroplast 30S ribosomal
protein S19 - Arabidopsis thaliana (Mouse-ear cress)
Length = 92
Score = 51.6 bits (118), Expect = 3e-05
Identities = 30/74 (40%), Positives = 40/74 (54%)
Frame = +1
Query: 235 LKRKPMALVKKLRRAKKEAPPNEKPEIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIK 414
LK+ P LR+ +K EK EI+ T R I+P M+G + I+NG+ V I
Sbjct: 5 LKKNPFVAKHLLRKIEKLNTKAEK-EIIITWSRASTIIPTMIGHTIAIHNGREHLPVYII 63
Query: 415 PEMIGHYLGEFSVT 456
M+GH LGEFS T
Sbjct: 64 DLMVGHKLGEFSPT 77
>UniRef50_P0A4B5 Cluster: 30S ribosomal protein S19; n=47;
Bacteria|Rep: 30S ribosomal protein S19 - Streptococcus
pneumoniae
Length = 93
Score = 51.2 bits (117), Expect = 4e-05
Identities = 24/74 (32%), Positives = 43/74 (58%)
Frame = +1
Query: 235 LKRKPMALVKKLRRAKKEAPPNEKPEIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIK 414
LK+ P +++ + +A +EK +++KT R I P +G + +Y+G+ V I+
Sbjct: 5 LKKGPFVDEHLMKKVEAQAN-DEKKKVIKTWSRRSTIFPSFIGYTIAVYDGRKHVPVYIQ 63
Query: 415 PEMIGHYLGEFSVT 456
+M+GH LGEF+ T
Sbjct: 64 EDMVGHKLGEFAPT 77
>UniRef50_Q2GUS0 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 152
Score = 49.2 bits (112), Expect = 1e-04
Identities = 21/52 (40%), Positives = 32/52 (61%)
Frame = +1
Query: 295 PNEKPEIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFS 450
P ++ ++T R+ I+P VG ++NGK ++ V I EM+GH LGEFS
Sbjct: 71 PGKRVAPIRTQARSATILPNFVGLKFQVHNGKVYHDVTITEEMVGHKLGEFS 122
>UniRef50_Q5GSU8 Cluster: Ribosomal protein S19; n=10;
Rickettsiales|Rep: Ribosomal protein S19 - Wolbachia sp.
subsp. Brugia malayi (strain TRS)
Length = 94
Score = 48.8 bits (111), Expect = 2e-04
Identities = 26/75 (34%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Frame = +1
Query: 253 ALVKKLRRAKKEAPPNEKPEIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIKPE-MIG 429
++++ + RA K+ N+ ++K H R +I+P +G +YNGK + V + + MIG
Sbjct: 14 SVLRLVNRALKQGSINK---VIKIHSRASVILPNCLGLKFAVYNGKDYIPVSVNDQNMIG 70
Query: 430 HYLGEFSVTYKPVKH 474
H GEFS T K H
Sbjct: 71 HKFGEFSPTRKFAGH 85
>UniRef50_Q8D208 Cluster: 30S ribosomal protein S19; n=14; cellular
organisms|Rep: 30S ribosomal protein S19 -
Wigglesworthia glossinidia brevipalpis
Length = 92
Score = 48.8 bits (111), Expect = 2e-04
Identities = 24/67 (35%), Positives = 38/67 (56%)
Frame = +1
Query: 256 LVKKLRRAKKEAPPNEKPEIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHY 435
L+KK+ K+ K ++++T R I P+M+G + ++NGK + I EM+GH
Sbjct: 15 LLKKIEEIKQTG----KKKLIRTWSRRSTIFPDMIGMTISVHNGKQHIPIFIGDEMVGHK 70
Query: 436 LGEFSVT 456
LGEF T
Sbjct: 71 LGEFVPT 77
>UniRef50_P0A7U6 Cluster: 30S ribosomal protein S19; n=263; cellular
organisms|Rep: 30S ribosomal protein S19 - Shigella
flexneri
Length = 92
Score = 48.8 bits (111), Expect = 2e-04
Identities = 24/74 (32%), Positives = 40/74 (54%)
Frame = +1
Query: 235 LKRKPMALVKKLRRAKKEAPPNEKPEIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIK 414
LK+ P + L++ +K +K + +T R I P M+G + ++NG+ V +
Sbjct: 5 LKKGPFIDLHLLKKVEKAVESGDKKPL-RTWSRRSTIFPNMIGLTIAVHNGRQHVPVFVT 63
Query: 415 PEMIGHYLGEFSVT 456
EM+GH LGEF+ T
Sbjct: 64 DEMVGHKLGEFAPT 77
>UniRef50_Q8LWZ8 Cluster: Ribosomal protein S19; n=16;
stramenopiles|Rep: Ribosomal protein S19 - Laminaria
digitata
Length = 89
Score = 48.4 bits (110), Expect = 3e-04
Identities = 28/61 (45%), Positives = 33/61 (54%)
Frame = +1
Query: 280 KKEAPPNEKPEIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTY 459
K+ P +EK T R I P VG + IYNGK +IKPEM+GH LGEF T
Sbjct: 17 KRLTPEHEKKP---TWSRRSTIYPAAVGLKLQIYNGKDMISRKIKPEMVGHKLGEFVTTR 73
Query: 460 K 462
K
Sbjct: 74 K 74
>UniRef50_Q2EEV9 Cluster: Ribosomal protein S19; n=1;
Helicosporidium sp. ex Simulium jonesii|Rep: Ribosomal
protein S19 - Helicosporidium sp. subsp. Simulium
jonesii (Green alga)
Length = 117
Score = 48.4 bits (110), Expect = 3e-04
Identities = 28/74 (37%), Positives = 40/74 (54%)
Frame = +1
Query: 235 LKRKPMALVKKLRRAKKEAPPNEKPEIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIK 414
L K + KL+R KK ++KT R+ IVP M+G I+ ++NG+ V I
Sbjct: 27 LTSKKQEKLVKLQRKKKII------SVIKTWSRSSTIVPLMIGEIIAVHNGREHIPVYIT 80
Query: 415 PEMIGHYLGEFSVT 456
EM+G LGEF+ T
Sbjct: 81 EEMVGFKLGEFATT 94
>UniRef50_Q6A6N0 Cluster: 30S ribosomal protein S19; n=75; cellular
organisms|Rep: 30S ribosomal protein S19 -
Propionibacterium acnes
Length = 93
Score = 48.4 bits (110), Expect = 3e-04
Identities = 22/62 (35%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Frame = +1
Query: 277 AKKEAPPNEKP--EIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFS 450
AKK NE ++KT R ++ P+M+G +G+++G+ V + M+GH LGEF+
Sbjct: 16 AKKVTAQNEAGTHNVIKTWSRRSMVTPDMIGHTIGVHDGRKHVPVFVTESMVGHKLGEFA 75
Query: 451 VT 456
T
Sbjct: 76 PT 77
>UniRef50_P53733 Cluster: Mitochondrial 37S ribosomal protein S19;
n=16; Dikarya|Rep: Mitochondrial 37S ribosomal protein
S19 - Saccharomyces cerevisiae (Baker's yeast)
Length = 91
Score = 48.0 bits (109), Expect = 3e-04
Identities = 21/49 (42%), Positives = 32/49 (65%)
Frame = +1
Query: 316 VKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYK 462
++T+ R I+P+ VG I+NGK + +EI +M+GH LGEF+ T K
Sbjct: 33 IRTNARAATILPQFVGLKFQIHNGKEYVPIEISEDMVGHKLGEFAPTRK 81
>UniRef50_P50893 Cluster: Mitochondrial ribosomal protein S19; n=3;
Chlorophyta|Rep: Mitochondrial ribosomal protein S19 -
Platymonas subcordiformis
Length = 83
Score = 48.0 bits (109), Expect = 3e-04
Identities = 21/52 (40%), Positives = 31/52 (59%)
Frame = +1
Query: 319 KTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKH 474
K + R ++ P+ +G V IYNG + ++IK +MIGH GEF+ T K H
Sbjct: 27 KIYSRRSVVSPKFIGREVEIYNGHKWITIKIKEDMIGHKFGEFAFTRKATIH 78
>UniRef50_Q9G868 Cluster: Ribosomal protein S19; n=2; Eukaryota|Rep:
Ribosomal protein S19 - Malawimonas jakobiformis
Length = 85
Score = 47.6 bits (108), Expect = 4e-04
Identities = 21/49 (42%), Positives = 30/49 (61%)
Frame = +1
Query: 310 EIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVT 456
+I+K + R +I P+ + V IYNG F ++I MIGH GEFS+T
Sbjct: 22 KIIKIYSRRSVIYPQYLNKKVKIYNGNKFIPIKITDNMIGHKFGEFSLT 70
>UniRef50_Q6YR17 Cluster: 30S ribosomal protein S19; n=72; cellular
organisms|Rep: 30S ribosomal protein S19 - Onion yellows
phytoplasma
Length = 93
Score = 47.6 bits (108), Expect = 4e-04
Identities = 25/74 (33%), Positives = 40/74 (54%)
Frame = +1
Query: 235 LKRKPMALVKKLRRAKKEAPPNEKPEIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIK 414
+K+ P+ L + +K+ K ++++T R+ I P VG + +YNG+ V I
Sbjct: 5 VKKGPIVASHLLAKIEKQKNLKNK-KVIQTWSRSSTITPIFVGHKIAVYNGREHIPVYIT 63
Query: 415 PEMIGHYLGEFSVT 456
M+GH LGEFS T
Sbjct: 64 ENMVGHKLGEFSPT 77
>UniRef50_A1DE43 Cluster: Mitochondrial ribosomal protein S19,
putative; n=2; Pezizomycotina|Rep: Mitochondrial
ribosomal protein S19, putative - Neosartorya fischeri
(strain ATCC 1020 / DSM 3700 / NRRL 181)(Aspergillus
fischerianus (strain ATCC 1020 / DSM 3700 / NRRL 181))
Length = 89
Score = 47.2 bits (107), Expect = 6e-04
Identities = 25/61 (40%), Positives = 33/61 (54%)
Frame = +1
Query: 280 KKEAPPNEKPEIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTY 459
+K PP P I KT R I+P VG ++NGKT+ V I +M+G LGE+ T
Sbjct: 20 RKLPPPPGTPPI-KTQKRGATILPNFVGLRFAVHNGKTYQDVLITEDMVGRKLGEYVPTR 78
Query: 460 K 462
K
Sbjct: 79 K 79
>UniRef50_P39697 Cluster: 40S ribosomal protein S19, mitochondrial
precursor; n=85; Streptophytina|Rep: 40S ribosomal
protein S19, mitochondrial precursor - Arabidopsis
thaliana (Mouse-ear cress)
Length = 212
Score = 47.2 bits (107), Expect = 6e-04
Identities = 23/50 (46%), Positives = 29/50 (58%)
Frame = +1
Query: 331 RNMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGR 480
R I+PE V S V IYNGKT + +I +GH GEF+ T K KH +
Sbjct: 161 RRSTILPEYVDSAVRIYNGKTHVRCKITEGKVGHKFGEFAFTRKVKKHAK 210
>UniRef50_P26874 Cluster: Mitochondrial ribosomal protein S19; n=7;
Eukaryota|Rep: Mitochondrial ribosomal protein S19 -
Marchantia polymorpha (Liverwort)
Length = 93
Score = 46.4 bits (105), Expect = 0.001
Identities = 22/50 (44%), Positives = 29/50 (58%)
Frame = +1
Query: 331 RNMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGR 480
R I+P+ VG IYNGK F ++I EM+GH GEF+ T K G+
Sbjct: 28 RRSCILPQFVGCYAQIYNGKGFVGLKITEEMVGHKFGEFASTRKTSSLGK 77
>UniRef50_A6YEB0 Cluster: Ribosomal protein S19; n=1; Chlorokybus
atmophyticus|Rep: Ribosomal protein S19 - Chlorokybus
atmophyticus (Soil alga)
Length = 130
Score = 46.0 bits (104), Expect = 0.001
Identities = 22/48 (45%), Positives = 27/48 (56%)
Frame = +1
Query: 331 RNMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKH 474
R I+P+ VG ++NGK F V I EMIGH GEF+ T K H
Sbjct: 76 RRSTILPDFVGQSFEVHNGKLFIPVRITEEMIGHKFGEFASTRKKPVH 123
>UniRef50_Q6CDN4 Cluster: Yarrowia lipolytica chromosome B of strain
CLIB122 of Yarrowia lipolytica; n=1; Yarrowia
lipolytica|Rep: Yarrowia lipolytica chromosome B of
strain CLIB122 of Yarrowia lipolytica - Yarrowia
lipolytica (Candida lipolytica)
Length = 89
Score = 45.6 bits (103), Expect = 0.002
Identities = 19/57 (33%), Positives = 34/57 (59%)
Frame = +1
Query: 304 KPEIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKH 474
K + ++T R I+P+ VG ++NGK + V + +M+G LGE++ T KP ++
Sbjct: 28 KKQPIQTDKRAATIIPQFVGVTFHVHNGKEYVPVNVTQDMVGTKLGEYAYTRKPFRY 84
>UniRef50_Q0CW10 Cluster: Putative uncharacterized protein; n=1;
Aspergillus terreus NIH2624|Rep: Putative
uncharacterized protein - Aspergillus terreus (strain
NIH 2624)
Length = 152
Score = 45.2 bits (102), Expect = 0.002
Identities = 20/55 (36%), Positives = 30/55 (54%)
Frame = +1
Query: 283 KEAPPNEKPEIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEF 447
++ PP +KT R+ I+P VG ++NGK + V I EM+G LGE+
Sbjct: 25 RKLPPAPNTPPIKTQKRSATILPNFVGLRFSVHNGKNYQDVLITEEMVGRKLGEY 79
>UniRef50_Q9TAJ3 Cluster: Ribosomal protein S19; n=1; Cafeteria
roenbergensis|Rep: Ribosomal protein S19 - Cafeteria
roenbergensis
Length = 84
Score = 44.0 bits (99), Expect = 0.005
Identities = 21/61 (34%), Positives = 36/61 (59%)
Frame = +1
Query: 298 NEKPEIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHG 477
N+K I KT R I+P ++ VG+++G TF ++ M+G+ LGEF T + ++G
Sbjct: 23 NDKNVIYKTQARGSTILPLIMNINVGVHDGYTFFKLTPNASMVGYKLGEFVRTRQAFRYG 82
Query: 478 R 480
+
Sbjct: 83 K 83
>UniRef50_A6BM61 Cluster: Ribosomal protein S19; n=1; Gnetum
parvifolium|Rep: Ribosomal protein S19 - Gnetum
parvifolium
Length = 115
Score = 42.3 bits (95), Expect = 0.017
Identities = 25/67 (37%), Positives = 37/67 (55%)
Frame = +1
Query: 256 LVKKLRRAKKEAPPNEKPEIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHY 435
L+ K+ + K+ N+K +I+ T R IVPEMVG ++NGK V I M+
Sbjct: 31 LLTKIEKLKR----NKKQKIIITWSRASTIVPEMVGYTFAVHNGKEHLPVYITENMLYQK 86
Query: 436 LGEFSVT 456
LG+F+ T
Sbjct: 87 LGDFAPT 93
>UniRef50_Q6E790 Cluster: Ribosomal protein S19; n=6; Oomycetes|Rep:
Ribosomal protein S19 - Saprolegnia ferax
Length = 82
Score = 41.9 bits (94), Expect = 0.022
Identities = 17/55 (30%), Positives = 34/55 (61%)
Frame = +1
Query: 298 NEKPEIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYK 462
N + + +K +N++I+P+ + +YNG+ F +++I +M+G+ GEF T K
Sbjct: 17 NNQKKWIKIFNKNLVIMPQDIDLTFNVYNGQNFIKLKIVKDMLGYKFGEFINTRK 71
>UniRef50_P0C478 Cluster: Chloroplast 30S ribosomal protein S19;
n=54; Eukaryota|Rep: Chloroplast 30S ribosomal protein
S19 - Oryza sativa (Rice)
Length = 93
Score = 41.1 bits (92), Expect = 0.038
Identities = 27/73 (36%), Positives = 34/73 (46%)
Frame = +1
Query: 238 KRKPMALVKKLRRAKKEAPPNEKPEIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIKP 417
K P L + +K EK IV T R I+P MVG + I+NGK + I
Sbjct: 5 KTNPFVAHHLLAKIEKVNMKEEKETIV-TWSRASSILPAMVGHTIAIHNGKEHIPIYITN 63
Query: 418 EMIGHYLGEFSVT 456
M+G LGEF T
Sbjct: 64 PMVGRKLGEFVPT 76
>UniRef50_P34772 Cluster: Plastid 30S ribosomal protein S19; n=1;
Euglena longa|Rep: Plastid 30S ribosomal protein S19 -
Astasia longa (Euglenophycean alga)
Length = 118
Score = 41.1 bits (92), Expect = 0.038
Identities = 25/73 (34%), Positives = 35/73 (47%)
Frame = +1
Query: 238 KRKPMALVKKLRRAKKEAPPNEKPEIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIKP 417
K+ P + K N K ++V T R+ + P MVG + +YNGK + I
Sbjct: 6 KKSPFISYRLFNTIDKMNLKNLK-QLVFTKSRSSTVFPSMVGHNISVYNGKNYVPFLILN 64
Query: 418 EMIGHYLGEFSVT 456
+MI LGEFS T
Sbjct: 65 QMISSKLGEFSRT 77
>UniRef50_Q6UVU3 Cluster: Ribosomal protein S19; n=1;
Pseudendoclonium akinetum|Rep: Ribosomal protein S19 -
Pseudendoclonium akinetum (Green alga)
Length = 116
Score = 40.3 bits (90), Expect = 0.067
Identities = 18/49 (36%), Positives = 30/49 (61%)
Frame = +1
Query: 316 VKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYK 462
++ + R+ IVP M+G+ V I+ G F ++ I +G+ LGEF+ T K
Sbjct: 58 IQVYQRSSTIVPGMIGNTVKIHTGHKFVKLSITEHTVGYKLGEFAPTKK 106
>UniRef50_Q23889 Cluster: Ribosomal protein S19; n=2;
Dictyosteliida|Rep: Ribosomal protein S19 -
Dictyostelium discoideum (Slime mold)
Length = 87
Score = 39.9 bits (89), Expect = 0.089
Identities = 21/60 (35%), Positives = 34/60 (56%)
Frame = +1
Query: 307 PEIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGRPG 486
P IV T R+ +IVP + + +YNG+ + V+I + +G LGE+ +T K K+ G
Sbjct: 24 PTIVTTE-RSSVIVPYYLTKTIYVYNGRKYVGVKITEKSLGRKLGEYVLTKKVEKYKASG 82
>UniRef50_Q06FM4 Cluster: Ribosomal protein S19; n=1; Pelargonium x
hortorum|Rep: Ribosomal protein S19 - Pelargonium
hortorum (Common geranium)
Length = 124
Score = 39.5 bits (88), Expect = 0.12
Identities = 22/74 (29%), Positives = 38/74 (51%)
Frame = +1
Query: 235 LKRKPMALVKKLRRAKKEAPPNEKPEIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIK 414
+KR P L++ +K +K + +KT R I+P M+G + I+NG+ + I
Sbjct: 16 VKRNPFVANPLLKKIEKLNAKAQK-DFLKTWSRASTIIPAMIGYTIYIHNGREHVPIPIT 74
Query: 415 PEMIGHYLGEFSVT 456
M+ + LG+F T
Sbjct: 75 KYMVNYKLGDFVPT 88
>UniRef50_A7QBJ9 Cluster: Chromosome chr13 scaffold_74, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr13 scaffold_74, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 101
Score = 39.5 bits (88), Expect = 0.12
Identities = 25/75 (33%), Positives = 36/75 (48%)
Frame = +1
Query: 232 GLKRKPMALVKKLRRAKKEAPPNEKPEIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEI 411
G K+ P LR+ EK EI+ T R I++P M+G + I+NG + I
Sbjct: 13 GEKKGPFIAKNLLRKIVMLNTMWEK-EIIVTWSRTSIVIPTMIGHTITIHNGNEHLLIYI 71
Query: 412 KPEMIGHYLGEFSVT 456
M+ H L +FS T
Sbjct: 72 TDCMVDHKLAKFSST 86
>UniRef50_Q0QIR8 Cluster: Ribosomal protein S19; n=1;
Oltmannsiellopsis viridis|Rep: Ribosomal protein S19 -
Oltmannsiellopsis viridis (Marine flagellate)
Length = 78
Score = 39.1 bits (87), Expect = 0.15
Identities = 18/44 (40%), Positives = 25/44 (56%)
Frame = +1
Query: 331 RNMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYK 462
R+ I+P +V I+NGK F + + E IGH GEF+ T K
Sbjct: 28 RDSTILPSLVNKQYKIFNGKRFIRFRVTEETIGHKFGEFASTRK 71
>UniRef50_A2DH24 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 89
Score = 35.1 bits (77), Expect = 2.5
Identities = 18/66 (27%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Frame = -2
Query: 447 ELSEVMADHLRLDFNLVKSFSVVNADN*TDHLGNDDHVSQVSLHDLWLLIRRSL--FLGA 274
++S+ +A+H LD N ++ + ++AD + D+H+++V L + W+ + +L
Sbjct: 17 DISKNVANHFWLDLNFEENVANIDADIYINKFWKDNHIAEVCLDNWWMNVCLALNSLTSL 76
Query: 273 TQLLDQ 256
QLLD+
Sbjct: 77 LQLLDK 82
>UniRef50_Q6HT65 Cluster: ComE operon protein 1; n=22; Bacillus|Rep:
ComE operon protein 1 - Bacillus anthracis
Length = 199
Score = 34.3 bits (75), Expect = 4.4
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Frame = +1
Query: 283 KEAPPNEKPEIVKTHLRNMIIVPEMVGSIV--GIYNGKTFNQVEIKPEMIGHYLGE 444
KE KP+I T L+ IIV +M G++V G+Y K ++V+ E G +L E
Sbjct: 43 KEIEKKSKPKISDTKLQKKIIVIDMKGAVVKEGVYEMKEGDRVKDAIEKAGGFLPE 98
>UniRef50_Q9G8T6 Cluster: Ribosomal protein S19; n=1; Rhodomonas
salina|Rep: Ribosomal protein S19 - Rhodomonas salina
(Cryptomonas salina)
Length = 72
Score = 34.3 bits (75), Expect = 4.4
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +1
Query: 298 NEKPEIVKTHLRNMIIVPEMVGSIVGIYNGK-TFNQVEIKPEMIGHYLGEFSVTYK 462
N + +K RN I P +G + NG+ + +++I +M+G +GEF +T K
Sbjct: 15 NSAEKELKIISRNTTIFPSFIGKYFLVKNGENSLRKIQISVDMVGLKIGEFVITKK 70
>UniRef50_Q8IB15 Cluster: Putative uncharacterized protein
MAL8P1.71; n=1; Plasmodium falciparum 3D7|Rep: Putative
uncharacterized protein MAL8P1.71 - Plasmodium
falciparum (isolate 3D7)
Length = 372
Score = 33.5 bits (73), Expect = 7.7
Identities = 23/61 (37%), Positives = 28/61 (45%)
Frame = +3
Query: 273 SRQERGSSE*EARDREDSLEKHDHRSRDGRFNCRHLQRKNF*PG*NQA*DDRPLPRRVLS 452
SR + R+R SLEKH HR RD + RH R+ DDR RR LS
Sbjct: 144 SRSRERNKHRSGRNRSRSLEKHRHRRRDSHRH-RHDDRRRSRSRDKYRHDDRHRSRRRLS 202
Query: 453 H 455
+
Sbjct: 203 Y 203
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 586,716,217
Number of Sequences: 1657284
Number of extensions: 9806474
Number of successful extensions: 23555
Number of sequences better than 10.0: 61
Number of HSP's better than 10.0 without gapping: 22739
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23513
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 83621356644
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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