Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_P09
         (911 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_05_0025 + 8215685-8215716,8215859-8215937,8216340-8216412,821...    62   6e-10
07_03_0571 - 19602755-19603831                                         58   1e-08
08_02_0730 - 20472851-20473075,20473332-20474285                       28   9.0  

>10_05_0025 +
           8215685-8215716,8215859-8215937,8216340-8216412,
           8216712-8216864,8217456-8217569,8217649-8217776,
           8219004-8219099,8219479-8219601,8219694-8219810,
           8219983-8220104,8220439-8220508
          Length = 368

 Score = 62.1 bits (144), Expect = 6e-10
 Identities = 44/133 (33%), Positives = 70/133 (52%), Gaps = 3/133 (2%)
 Frame = +1

Query: 211 KAXSIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGEGAVQFYERAEVTPPEDD 390
           +A   R+KSV+NIQKIT++MKMV+A+K    +   + +R   +    F       P  D 
Sbjct: 60  RALRTRMKSVRNIQKITKAMKMVAASKLRAVQIRTENSRGLWQ---PFTALLGDVPSVDV 116

Query: 391 PKQLFVAMTSDRGLCGAVXT---GVSKVIRNRLGEPGAENXKVICVGDKSRGILQRLYGK 561
            K + VA+TSD+GLCG + +    VSK +      P  E+ K + +G+K +  L R    
Sbjct: 117 KKNVIVAITSDKGLCGGINSTSVKVSKALHKLTSGPEKES-KYVILGEKGKVQLIRDSKD 175

Query: 562 HIISVANEIGRLP 600
           +I    +E+ + P
Sbjct: 176 NIEMTVSELQKNP 188


>07_03_0571 - 19602755-19603831
          Length = 358

 Score = 58.0 bits (134), Expect = 1e-08
 Identities = 36/105 (34%), Positives = 55/105 (52%), Gaps = 11/105 (10%)
 Frame = +1

Query: 205 TLKAXSIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGEGAVQ-FYERAEVTPP 381
           +L+    R+ SV+N QKIT++MK+V+AAK  RA+  + ++RP+ E  V+  Y   +    
Sbjct: 37  SLRELRSRIDSVRNTQKITEAMKLVAAAKVRRAQEAVVSSRPFSEALVEVLYNMNQEIQT 96

Query: 382 ED----------DPKQLFVAMTSDRGLCGAVXTGVSKVIRNRLGE 486
           ED            K   V +T +RGLCG+    V K    R+ E
Sbjct: 97  EDIDLPLTRIRPVKKVALVVLTGERGLCGSFNNNVLKKAETRIEE 141


>08_02_0730 - 20472851-20473075,20473332-20474285
          Length = 392

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 12/42 (28%), Positives = 23/42 (54%)
 Frame = -3

Query: 576 NTNDVLSVQSLQDTARFISHTDHLXVLSTRFAETVADHFGYT 451
           ++ DV+ + SL+D A FI H   L + +  +   + +H  +T
Sbjct: 346 DSQDVVPIDSLEDEALFIGHNGTLCLSTKDYPALLPNHVYFT 387


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,561,381
Number of Sequences: 37544
Number of extensions: 486583
Number of successful extensions: 1198
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1162
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1196
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2588957540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)