Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP02_F_P09
(911 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC084158-4|AAK68562.1| 299|Caenorhabditis elegans Hypothetical ... 190 2e-48
AC084158-3|AAL00872.1| 313|Caenorhabditis elegans Hypothetical ... 190 2e-48
AC084158-5|AAO21417.1| 200|Caenorhabditis elegans Hypothetical ... 160 1e-39
AF043700-6|AAB97569.2| 443|Caenorhabditis elegans Hypothetical ... 30 2.0
Z75533-1|CAA99815.1| 423|Caenorhabditis elegans Hypothetical pr... 29 6.1
U97003-2|AAB52271.2| 376|Caenorhabditis elegans Hypothetical pr... 29 6.1
AL021180-1|CAA15980.1| 383|Caenorhabditis elegans Hypothetical ... 29 6.1
AF303252-1|AAG50210.1| 383|Caenorhabditis elegans 3E324 protein. 29 6.1
>AC084158-4|AAK68562.1| 299|Caenorhabditis elegans Hypothetical
protein Y69A2AR.18a protein.
Length = 299
Score = 190 bits (462), Expect = 2e-48
Identities = 98/181 (54%), Positives = 123/181 (67%), Gaps = 4/181 (2%)
Frame = +1
Query: 193 RNMATLKAXSIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGEGAVQFYER--- 363
R ATLK SIRLKSVKNIQKIT+SMKMV+AAKY +AER+LK AR YG GA F++
Sbjct: 23 RGFATLKDISIRLKSVKNIQKITKSMKMVAAAKYAKAERELKGARAYGVGAKTFFDNIDP 82
Query: 364 -AEVTPPEDDPKQLFVAMTSDRGLCGAVXTGVSKVIRNRLGEPGAENXKVICVGDKSRGI 540
E ++ KQ+ V +TSDRGLCG V + + K +N L G + +V+ +GDKSR
Sbjct: 83 VVEGVEKQESKKQVLVLITSDRGLCGGVHSSIVKEAKNILNNAGDKEIRVVAIGDKSRAG 142
Query: 541 LQRLYGKHIISVANEIGRLPPTFLDASQLATAILTSGYEFGSGXIIYXKFKSVVSYAQSD 720
LQRLY I+ NEIGR PP+F DAS A AIL SGY+F +G I++ +FK+VVSY S
Sbjct: 143 LQRLYANSILLSGNEIGRAPPSFADASIAAKAILDSGYDFETGTILFNRFKTVVSYETSK 202
Query: 721 L 723
L
Sbjct: 203 L 203
>AC084158-3|AAL00872.1| 313|Caenorhabditis elegans Hypothetical
protein Y69A2AR.18b protein.
Length = 313
Score = 190 bits (462), Expect = 2e-48
Identities = 98/181 (54%), Positives = 123/181 (67%), Gaps = 4/181 (2%)
Frame = +1
Query: 193 RNMATLKAXSIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGEGAVQFYER--- 363
R ATLK SIRLKSVKNIQKIT+SMKMV+AAKY +AER+LK AR YG GA F++
Sbjct: 23 RGFATLKDISIRLKSVKNIQKITKSMKMVAAAKYAKAERELKGARAYGVGAKTFFDNIDP 82
Query: 364 -AEVTPPEDDPKQLFVAMTSDRGLCGAVXTGVSKVIRNRLGEPGAENXKVICVGDKSRGI 540
E ++ KQ+ V +TSDRGLCG V + + K +N L G + +V+ +GDKSR
Sbjct: 83 VVEGVEKQESKKQVLVLITSDRGLCGGVHSSIVKEAKNILNNAGDKEIRVVAIGDKSRAG 142
Query: 541 LQRLYGKHIISVANEIGRLPPTFLDASQLATAILTSGYEFGSGXIIYXKFKSVVSYAQSD 720
LQRLY I+ NEIGR PP+F DAS A AIL SGY+F +G I++ +FK+VVSY S
Sbjct: 143 LQRLYANSILLSGNEIGRAPPSFADASIAAKAILDSGYDFETGTILFNRFKTVVSYETSK 202
Query: 721 L 723
L
Sbjct: 203 L 203
>AC084158-5|AAO21417.1| 200|Caenorhabditis elegans Hypothetical
protein Y69A2AR.18c protein.
Length = 200
Score = 160 bits (388), Expect = 1e-39
Identities = 84/154 (54%), Positives = 103/154 (66%), Gaps = 4/154 (2%)
Frame = +1
Query: 193 RNMATLKAXSIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGEGAVQFYER--- 363
R ATLK SIRLKSVKNIQKIT+SMKMV+AAKY +AER+LK AR YG GA F++
Sbjct: 23 RGFATLKDISIRLKSVKNIQKITKSMKMVAAAKYAKAERELKGARAYGVGAKTFFDNIDP 82
Query: 364 -AEVTPPEDDPKQLFVAMTSDRGLCGAVXTGVSKVIRNRLGEPGAENXKVICVGDKSRGI 540
E ++ KQ+ V +TSDRGLCG V + + K +N L G + +V+ +GDKSR
Sbjct: 83 VVEGVEKQESKKQVLVLITSDRGLCGGVHSSIVKEAKNILNNAGDKEIRVVAIGDKSRAG 142
Query: 541 LQRLYGKHIISVANEIGRLPPTFLDASQLATAIL 642
LQRLY I+ NEIGR PP+F DAS A AIL
Sbjct: 143 LQRLYANSILLSGNEIGRAPPSFADASIAAKAIL 176
>AF043700-6|AAB97569.2| 443|Caenorhabditis elegans Hypothetical
protein K09H9.2 protein.
Length = 443
Score = 30.3 bits (65), Expect = 2.0
Identities = 15/53 (28%), Positives = 24/53 (45%)
Frame = +1
Query: 313 LKAARPYGEGAVQFYERAEVTPPEDDPKQLFVAMTSDRGLCGAVXTGVSKVIR 471
L RP+ + + + E +P DP F+ ++ D + GA G S IR
Sbjct: 63 LSKNRPFDQAMNKTMTKMEFSPDYSDPSSEFMLLSVDESVIGAFSEGQSLTIR 115
>Z75533-1|CAA99815.1| 423|Caenorhabditis elegans Hypothetical
protein C54G4.2 protein.
Length = 423
Score = 28.7 bits (61), Expect = 6.1
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = -3
Query: 633 SGQLTGVQESRWETSDLISNTNDVLSVQSLQDTARFISH 517
S +T ES +TSDLIS+ D + +F+SH
Sbjct: 64 SASITPSTESTMKTSDLISSIGDHTEGEPSNGNTKFVSH 102
>U97003-2|AAB52271.2| 376|Caenorhabditis elegans Hypothetical
protein F47C10.1 protein.
Length = 376
Score = 28.7 bits (61), Expect = 6.1
Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = -2
Query: 199 YSCLADGKPPPRLGCRHPVRSXPTFCKFYGCLS-GKIYQSTKK 74
Y+CLADG G H R C+F CL G Y+ST++
Sbjct: 51 YTCLADGSCYTNFGFTHG-RPKCRSCRFRKCLDVGMKYRSTEE 92
>AL021180-1|CAA15980.1| 383|Caenorhabditis elegans Hypothetical
protein Y44F5A.1 protein.
Length = 383
Score = 28.7 bits (61), Expect = 6.1
Identities = 19/42 (45%), Positives = 21/42 (50%)
Frame = +1
Query: 511 ICVGDKSRGILQRLYGKHIISVANEIGRLPPTFLDASQLATA 636
+CV D G R K SV I LPPT L + QLATA
Sbjct: 75 LCVFDIDTGKRVRCILKCHRSVPTAICTLPPTALKSQQLATA 116
>AF303252-1|AAG50210.1| 383|Caenorhabditis elegans 3E324 protein.
Length = 383
Score = 28.7 bits (61), Expect = 6.1
Identities = 19/42 (45%), Positives = 21/42 (50%)
Frame = +1
Query: 511 ICVGDKSRGILQRLYGKHIISVANEIGRLPPTFLDASQLATA 636
+CV D G R K SV I LPPT L + QLATA
Sbjct: 75 LCVFDIDTGKRVRCILKCHRSVPTAICTLPPTALKSQQLATA 116
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,954,319
Number of Sequences: 27780
Number of extensions: 379533
Number of successful extensions: 740
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 715
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 737
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2328783996
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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