Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP02_F_P09
(911 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g33040.1 68415.m04052 ATP synthase gamma chain, mitochondrial... 84 1e-16
At4g04640.1 68417.m00679 ATP synthase gamma chain 1, chloroplast... 61 9e-10
At1g15700.1 68414.m01884 ATP synthase gamma chain 2, chloroplast... 56 3e-08
At4g33430.1 68417.m04750 brassinosteroid insensitive 1-associate... 29 4.3
At5g57890.1 68418.m07242 anthranilate synthase beta subunit, put... 29 5.7
At5g37920.1 68418.m04568 hypothetical protein contains Pfam PF04... 29 5.7
At1g25220.1 68414.m03130 anthranilate synthase beta subunit (ASB... 29 5.7
At1g25155.1 68414.m03123 anthranilate synthase beta subunit, put... 29 5.7
At1g25083.1 68414.m03118 anthranilate synthase beta subunit, put... 29 5.7
At1g24909.1 68414.m03112 anthranilate synthase beta subunit, put... 29 5.7
At1g24807.1 68414.m03108 anthranilate synthase beta subunit, put... 29 5.7
At5g09980.1 68418.m01153 expressed protein 28 7.5
At2g13790.1 68415.m01522 leucine-rich repeat family protein / pr... 28 7.5
>At2g33040.1 68415.m04052 ATP synthase gamma chain, mitochondrial
(ATPC) identical to SP|Q96250 ATP synthase gamma chain,
mitochondrial precursor (EC 3.6.3.14) {Arabidopsis
thaliana}; contains Pfam profile: PF00231 ATP synthase
Length = 325
Score = 84.2 bits (199), Expect = 1e-16
Identities = 56/163 (34%), Positives = 87/163 (53%), Gaps = 2/163 (1%)
Frame = +1
Query: 226 RLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGEGAVQFYERAEVTPPEDDPKQLF 405
R+KSVKNIQKIT++MKMV+A+K + + +R + F P D K +
Sbjct: 51 RMKSVKNIQKITKAMKMVAASKLRAVQGRAENSRGLWQ---PFTALLGDNPSIDVKKSVV 107
Query: 406 VAMTSDRGLCGAVXTGVSKVIR--NRLGEPGAENXKVICVGDKSRGILQRLYGKHIISVA 579
V ++SD+GLCG + + V KV R +L + + + VG+K++ I+ R I+
Sbjct: 108 VTLSSDKGLCGGINSTVVKVSRALYKLNAGPEKEVQFVIVGEKAKAIMFRDSKNDIVLSV 167
Query: 580 NEIGRLPPTFLDASQLATAILTSGYEFGSGXIIYXKFKSVVSY 708
E+ + P + S LA IL EF + I+Y KF SVV++
Sbjct: 168 TELNKNPLNYAQVSVLADDIL-KNVEFDALRIVYNKFHSVVAF 209
>At4g04640.1 68417.m00679 ATP synthase gamma chain 1, chloroplast
(ATPC1) identical to SP|Q01908 ATP synthase gamma chain
1, chloroplast precursor (EC 3.6.3.14) {Arabidopsis
thaliana}
Length = 373
Score = 61.3 bits (142), Expect = 9e-10
Identities = 61/184 (33%), Positives = 83/184 (45%), Gaps = 17/184 (9%)
Frame = +1
Query: 202 ATLKAXSIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGEGAVQFYERAEVTPP 381
A+L+ R+ SVKN QKIT++MK+V+AAK RA+ + RP+ E V+
Sbjct: 51 ASLRELRDRIDSVKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFSETLVEVLYNINEQLQ 110
Query: 382 EDD-----------PKQLFVAMTSDRGLCGAVXTGVSKVIRNRLGE---PGAENXKVICV 519
DD K V +T DRGLCG + K R+ E G E VI V
Sbjct: 111 TDDVDVPLTKVRPVKKVALVVVTGDRGLCGGFNNFIIKKAEARIKELKGLGLE-YTVISV 169
Query: 520 GDKSRG-ILQRLYGKHIISVANEIGRLPPTFLDASQLATAI--LTSGYEFGSGXIIYXKF 690
G K L+R Y + E G L PT +A +A + L E ++Y KF
Sbjct: 170 GKKGNSYFLRRPYIP--VDKYLEAGTL-PTAKEAQAVADDVFSLFISEEVDKVELLYTKF 226
Query: 691 KSVV 702
S+V
Sbjct: 227 VSLV 230
>At1g15700.1 68414.m01884 ATP synthase gamma chain 2, chloroplast
(ATPC2) identical to SP|Q01909 ATP synthase gamma chain
2, chloroplast precursor (EC 3.6.3.14) {Arabidopsis
thaliana}; contains Pfam profile: PF00231 ATP synthase;
similar to ATP synthase gamma-subunit GI:21241 from
[Spinacia oleracea]
Length = 386
Score = 56.0 bits (129), Expect = 3e-08
Identities = 53/174 (30%), Positives = 79/174 (45%), Gaps = 15/174 (8%)
Frame = +1
Query: 226 RLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGEGAVQ-FYERAEVTPPEDDPKQL 402
R+ SVKN QKIT++M++V+AA+ RA+ + RP+ E V+ Y + ED L
Sbjct: 69 RIDSVKNTQKITEAMRLVAAARVRRAQDAVIKGRPFTETLVEILYSINQSAQLEDIDFPL 128
Query: 403 ----------FVAMTSDRGLCGAVXTGVSKVIRNRLGE--PGAENXKVICVGDKSRGILQ 546
V +T D+GLCG V+K R+ E + VI VG K
Sbjct: 129 SIVRPVKRVALVVVTGDKGLCGGFNNAVTKKATLRVQELKQRGIDCVVISVGKKGNAYFS 188
Query: 547 RLYGKHIISVANEIGRLPPTFLDASQLATAI--LTSGYEFGSGXIIYXKFKSVV 702
R + + E G + PT +A +A + L E ++Y KF S+V
Sbjct: 189 R-RDEFDVDKCIEGGGVFPTTKEAQVIADDVFSLFVSEEVDKVELVYTKFVSLV 241
>At4g33430.1 68417.m04750 brassinosteroid insensitive 1-associated
receptor kinase 1 (BAK1) / somatic embryogenesis
receptor-like kinase 3 (SERK3) identical to SP|Q94F62
BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase
1 precursor (EC 2.7.1.37) (BRI1-associated receptor
kinase 1) (Somatic embryogenesis receptor-like kinase 3)
{Arabidopsis thaliana}; contains Pfam domains PF00560:
Leucine Rich Repeat and PF00069: Protein kinase domain;
identical to cDNA somatic embryogenesis receptor-like
kinase 3 (SERK3) GI:14573458
Length = 615
Score = 29.1 bits (62), Expect = 4.3
Identities = 28/103 (27%), Positives = 41/103 (39%), Gaps = 4/103 (3%)
Frame = +1
Query: 358 ERAEVTPPEDDPKQLFVAMTSDRGLCGAVXTGVSKVIRNRLGEPGA---ENXKVICVGDK 528
ER E PP D PK+ +A+ S RGL K+I + E + + VGD
Sbjct: 377 ERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAV-VGDF 435
Query: 529 SRGILQRLYGKHI-ISVANEIGRLPPTFLDASQLATAILTSGY 654
L H+ +V IG + P +L + + GY
Sbjct: 436 GLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGY 478
>At5g57890.1 68418.m07242 anthranilate synthase beta subunit,
putative strong similarity to anthranilate synthase beta
chain GI:403434 [Arabidopsis thaliana]
Length = 273
Score = 28.7 bits (61), Expect = 5.7
Identities = 29/109 (26%), Positives = 44/109 (40%), Gaps = 19/109 (17%)
Frame = -1
Query: 644 VRMAVAN*LASKKVGGRRPISLATLMMCFPYNLCRIPRDLS-------PTQIT------- 507
+ MA +N ++S V PI + F YNLC+ +L ++T
Sbjct: 53 IEMAESNSISSVVVNSSGPIIVIDNYDSFTYNLCQYMGELGCHFEVYRNDELTVEELKRK 112
Query: 506 -----LXFSAPGSPRRLRITLDTPVXTAPHKPLSEVIATNNCLGSSSGG 375
L PG+P+ I+L T + P PL V C+G + GG
Sbjct: 113 KPRGLLISPGPGTPQDSGISLQTVLELGPLVPLFGVCMGLQCIGEAFGG 161
>At5g37920.1 68418.m04568 hypothetical protein contains Pfam PF04510
: Family of unknown function (DUF577)); common family
comprised of At5g37410, At5g37400, At5g37920,
At5g37460, At5g37650, At5g37470, At5g37420, At5g37430
contains Pfam PF04510 : Family of unknown function
(DUF577)
Length = 609
Score = 28.7 bits (61), Expect = 5.7
Identities = 21/63 (33%), Positives = 28/63 (44%), Gaps = 3/63 (4%)
Frame = -3
Query: 627 QLTGVQESRWETSDLISNTNDVLSVQSLQDTARFISHTDHLXVLS---TRFAETVADHFG 457
QL + ES L+ N N++ V+ LQD RF+S +L S RF T G
Sbjct: 232 QLVNIVES---AKKLVDNGNEMFLVRVLQDFERFVSRDMNLYKYSEVQCRFVSTFVSQIG 288
Query: 456 YTS 448
S
Sbjct: 289 KLS 291
>At1g25220.1 68414.m03130 anthranilate synthase beta subunit (ASB1)
identical to anthranilate synthase beta subunit
GI:403434 from [Arabidopsis thaliana]
Length = 276
Score = 28.7 bits (61), Expect = 5.7
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = -1
Query: 491 PGSPRRLRITLDTPVXTAPHKPLSEVIATNNCLGSSSGG 375
PG+P+ I+L T + P PL V C+G + GG
Sbjct: 126 PGTPQDSGISLQTVLELGPLVPLFGVCMGLQCIGEAFGG 164
>At1g25155.1 68414.m03123 anthranilate synthase beta subunit,
putative strong similarity to anthranilate synthase beta
subunit GI:403434 from (Arabidopsis thaliana)
Length = 222
Score = 28.7 bits (61), Expect = 5.7
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = -1
Query: 491 PGSPRRLRITLDTPVXTAPHKPLSEVIATNNCLGSSSGG 375
PG+P+ I+L T + P PL V C+G + GG
Sbjct: 72 PGTPQDSGISLQTVLELGPLVPLFGVCMGLQCIGEAFGG 110
>At1g25083.1 68414.m03118 anthranilate synthase beta subunit,
putative strong similarity to anthranilate synthase beta
subunit GI:403434 from (Arabidopsis thaliana); similar
to ESTs dbj|AV540153.1, dbj|AV557490.1, gb|AI997696.1,
gb|AW004516.1, dbj|AV521371.1
Length = 222
Score = 28.7 bits (61), Expect = 5.7
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = -1
Query: 491 PGSPRRLRITLDTPVXTAPHKPLSEVIATNNCLGSSSGG 375
PG+P+ I+L T + P PL V C+G + GG
Sbjct: 72 PGTPQDSGISLQTVLELGPLVPLFGVCMGLQCIGEAFGG 110
>At1g24909.1 68414.m03112 anthranilate synthase beta subunit,
putative strong similarity to anthranilate synthase beta
subunit GI:403434 from (Arabidopsis thaliana)
Length = 222
Score = 28.7 bits (61), Expect = 5.7
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = -1
Query: 491 PGSPRRLRITLDTPVXTAPHKPLSEVIATNNCLGSSSGG 375
PG+P+ I+L T + P PL V C+G + GG
Sbjct: 72 PGTPQDSGISLQTVLELGPLVPLFGVCMGLQCIGEAFGG 110
>At1g24807.1 68414.m03108 anthranilate synthase beta subunit,
putative similar to anthranilate synthase beta chain
GI:403434; similar to ESTs dbj|AV540153.1,
dbj|AV557490.1, gb|AI997696.1, gb|AW004516.1,
dbj|AV521371.1
Length = 235
Score = 28.7 bits (61), Expect = 5.7
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = -1
Query: 491 PGSPRRLRITLDTPVXTAPHKPLSEVIATNNCLGSSSGG 375
PG+P+ I+L T + P PL V C+G + GG
Sbjct: 85 PGTPQDSGISLQTVLELGPLVPLFGVCMGLQCIGEAFGG 123
>At5g09980.1 68418.m01153 expressed protein
Length = 81
Score = 28.3 bits (60), Expect = 7.5
Identities = 17/43 (39%), Positives = 21/43 (48%)
Frame = +1
Query: 379 PEDDPKQLFVAMTSDRGLCGAVXTGVSKVIRNRLGEPGAENXK 507
PED +++ V S RGL G V K R G+PG N K
Sbjct: 39 PEDGEEEVKVVEVSSRGLPG--KKNVLKKSRESSGKPGGTNKK 79
>At2g13790.1 68415.m01522 leucine-rich repeat family protein /
protein kinase family protein
Length = 620
Score = 28.3 bits (60), Expect = 7.5
Identities = 27/103 (26%), Positives = 40/103 (38%), Gaps = 4/103 (3%)
Frame = +1
Query: 358 ERAEVTPPEDDPKQLFVAMTSDRGLCGAVXTGVSKVIRNRLGEPGA---ENXKVICVGDK 528
ER E P D PK+ +A+ S RGL K+I + E + + VGD
Sbjct: 382 ERPEGNPALDWPKRKHIALGSARGLAYLHDHCDQKIIHRDVKAANILLDEEFEAV-VGDF 440
Query: 529 SRGILQRLYGKHI-ISVANEIGRLPPTFLDASQLATAILTSGY 654
L H+ +V IG + P +L + + GY
Sbjct: 441 GLAKLMNYNDSHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGY 483
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,165,439
Number of Sequences: 28952
Number of extensions: 365335
Number of successful extensions: 869
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 843
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 865
length of database: 12,070,560
effective HSP length: 81
effective length of database: 9,725,448
effective search space used: 2159049456
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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