Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_P08
         (908 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_01_0039 - 319871-319914,320021-320084,320198-320263,320397-32...    53   3e-07
11_01_0040 - 304439-304482,304589-304652,304766-304831,305509-30...    41   0.002
01_01_1018 - 8046819-8046876,8046995-8047212,8048099-8048177,804...    29   6.7  

>12_01_0039 -
           319871-319914,320021-320084,320198-320263,320397-320458,
           321211-321298,321401-321461,321542-321625,322332-322630
          Length = 255

 Score = 53.2 bits (122), Expect = 3e-07
 Identities = 31/119 (26%), Positives = 63/119 (52%)
 Frame = +1

Query: 439 GFAKLFRKLSDDSWEKTIGLIKHVTKRGGKMDFSSHTTLKGDKGSXYTVEVGHEIGALAK 618
           GFAK F++ SD+  +    L+K+   RGG++   S  T   +       E G  + A+  
Sbjct: 125 GFAKFFKESSDEERDHAEKLMKYQNMRGGRVRLQSIVTPLTEFDHP---EKGDALYAMEL 181

Query: 619 ALDXQKQLAERIFFIHREVTKNSDLLHDAEITQYIEEEFVSQQADTIRXLAGHTSDLKR 795
           AL  +K + E++  +H   ++     +D ++T ++E EF+ +Q + I+ ++ + + L+R
Sbjct: 182 ALALEKLVNEKLHNLHSVASR----CNDPQLTDFVESEFLEEQVEAIKKISEYVAQLRR 236


>11_01_0040 -
           304439-304482,304589-304652,304766-304831,305509-305640,
           305744-305804,305885-306018,306310-306654
          Length = 281

 Score = 40.7 bits (91), Expect = 0.002
 Identities = 31/119 (26%), Positives = 55/119 (46%)
 Frame = +1

Query: 439 GFAKLFRKLSDDSWEKTIGLIKHVTKRGGKMDFSSHTTLKGDKGSXYTVEVGHEIGALAK 618
           GFAK F++ SD+  +    LIK+   RGG++   S  T           E  H       
Sbjct: 157 GFAKFFKESSDEERDHAEKLIKYQNMRGGRVRLQSIVT--------PLTEFDHP--EKGD 206

Query: 619 ALDXQKQLAERIFFIHREVTKNSDLLHDAEITQYIEEEFVSQQADTIRXLAGHTSDLKR 795
           AL  +   A  I+  +  V       +D ++T ++E EF+ +Q + I+ ++ + + L+R
Sbjct: 207 ALYGELLSACPIYVFYSMVASR---CNDPQLTDFVESEFLEEQVEAIKKISEYVAQLRR 262


>01_01_1018 -
           8046819-8046876,8046995-8047212,8048099-8048177,
           8048455-8048540,8048698-8048983,8049063-8049205,
           8049308-8049508,8049626-8049754,8050463-8050738,
           8050823-8051098,8051364-8052364,8052452-8052634,
           8052865-8052937,8053205-8053313,8053622-8053785
          Length = 1093

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 17/46 (36%), Positives = 23/46 (50%)
 Frame = +1

Query: 676 TKNSDLLHDAEITQYIEEEFVSQQADTIRXLAGHTSDLKRFITENT 813
           T N DL H A+I  YI  E    +   ++   GHTSD + F  E +
Sbjct: 269 TGNRDLYH-AQIHPYINGEHKRDRCIQMKEKLGHTSDHEGFSREKS 313


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,282,324
Number of Sequences: 37544
Number of extensions: 293600
Number of successful extensions: 695
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 682
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 695
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2577242800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)