Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_P08
         (908 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At2g40300.1 68415.m04964 ferritin, putative similar to ferritin ...    51   9e-07
At5g01600.1 68418.m00075 ferritin 1 (FER1) identical to ferritin...    44   2e-04
At3g11050.1 68416.m01333 ferritin, putative similar to ferritin ...    42   6e-04
At3g54000.3 68416.m05969 expressed protein                             28   9.8  
At3g54000.2 68416.m05968 expressed protein                             28   9.8  

>At2g40300.1 68415.m04964 ferritin, putative similar to ferritin
           subunit cowpea2 precursor [Vigna unguiculata]
           GI:2970654; contains Pfam profile PF00210: Ferritin-like
           domain
          Length = 259

 Score = 51.2 bits (117), Expect = 9e-07
 Identities = 30/119 (25%), Positives = 62/119 (52%)
 Frame = +1

Query: 439 GFAKLFRKLSDDSWEKTIGLIKHVTKRGGKMDFSSHTTLKGDKGSXYTVEVGHEIGALAK 618
           G AK F++ S +  E    L+++  KRGG++   S   +         V+ G  +  +  
Sbjct: 131 GLAKFFKESSLEEREHAEKLMEYQNKRGGRVKLQS---IVMPLSEFEHVDKGDALYGMEL 187

Query: 619 ALDXQKQLAERIFFIHREVTKNSDLLHDAEITQYIEEEFVSQQADTIRXLAGHTSDLKR 795
           AL  +K + E++  +H   +KN+D+     +  +IE EF+++Q + I+ ++ + + L+R
Sbjct: 188 ALSLEKLVNEKLLNLHSVASKNNDV----HLADFIESEFLTEQVEAIKLISEYVAQLRR 242


>At5g01600.1 68418.m00075 ferritin 1 (FER1) identical to ferritin
           [Arabidopsis thaliana] GI:1246401, GI:8163920
          Length = 255

 Score = 43.6 bits (98), Expect = 2e-04
 Identities = 25/118 (21%), Positives = 60/118 (50%)
 Frame = +1

Query: 439 GFAKLFRKLSDDSWEKTIGLIKHVTKRGGKMDFSSHTTLKGDKGSXYTVEVGHEIGALAK 618
           G AK F++ S++        +++  +RGG++    H  +       +  E G  + A+  
Sbjct: 128 GLAKFFKESSEEERGHAEKFMEYQNQRGGRVKL--HPIVSPISEFEHA-EKGDALYAMEL 184

Query: 619 ALDXQKQLAERIFFIHREVTKNSDLLHDAEITQYIEEEFVSQQADTIRXLAGHTSDLK 792
           AL  +K   E++  +H+  ++N    +D ++  ++E EF+ +Q + I+ ++ + + L+
Sbjct: 185 ALSLEKLTNEKLLNVHKVASEN----NDPQLADFVESEFLGEQIEAIKKISDYITQLR 238


>At3g11050.1 68416.m01333 ferritin, putative similar to ferritin
           subunit cowpea2 precursor GI:2970654 (Vigna
           unguiculata); contains Pfam profile PF00210:
           Ferritin-like domain
          Length = 253

 Score = 41.9 bits (94), Expect = 6e-04
 Identities = 28/119 (23%), Positives = 56/119 (47%)
 Frame = +1

Query: 439 GFAKLFRKLSDDSWEKTIGLIKHVTKRGGKMDFSSHTTLKGDKGSXYTVEVGHEIGALAK 618
           GFAK F   S +        +++  KRGG++   S   +          E G  + A+  
Sbjct: 123 GFAKFFNDSSLEERGHAEMFMEYQNKRGGRVKLQS---ILMPVSEFDHEEKGDALHAMEL 179

Query: 619 ALDXQKQLAERIFFIHREVTKNSDLLHDAEITQYIEEEFVSQQADTIRXLAGHTSDLKR 795
           AL  +K   E++  +     KN+D+    ++  ++E EF+ +Q + I+ ++ + + L+R
Sbjct: 180 ALSLEKLTNEKLLKLQSVGVKNNDV----QLVDFVESEFLGEQVEAIKKISEYVAQLRR 234


>At3g54000.3 68416.m05969 expressed protein
          Length = 301

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
 Frame = +2

Query: 611 WPKPWTRRSSLPRGF-SSSTGKSLKTATSSTMLRSLNTSRRNS*VSKPIRFVXSRV 775
           W   + RR  +   F    TGK   T T   + RS+N + R     KP +F+ S +
Sbjct: 237 WSNQFPRRDVMRAVFIGDHTGKRGSTGTGVFLPRSVNHTSRTETREKPSKFLKSSI 292


>At3g54000.2 68416.m05968 expressed protein
          Length = 301

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
 Frame = +2

Query: 611 WPKPWTRRSSLPRGF-SSSTGKSLKTATSSTMLRSLNTSRRNS*VSKPIRFVXSRV 775
           W   + RR  +   F    TGK   T T   + RS+N + R     KP +F+ S +
Sbjct: 237 WSNQFPRRDVMRAVFIGDHTGKRGSTGTGVFLPRSVNHTSRTETREKPSKFLKSSI 292


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,489,412
Number of Sequences: 28952
Number of extensions: 220838
Number of successful extensions: 571
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 563
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 571
length of database: 12,070,560
effective HSP length: 81
effective length of database: 9,725,448
effective search space used: 2149324008
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)