Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP02_F_P07
(900 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_19437| Best HMM Match : Tubulin (HMM E-Value=0) 321 4e-88
SB_2674| Best HMM Match : Tubulin (HMM E-Value=0) 321 4e-88
SB_2003| Best HMM Match : Tubulin (HMM E-Value=0) 320 1e-87
SB_34400| Best HMM Match : Tubulin (HMM E-Value=0) 319 2e-87
SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.) 317 9e-87
SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.) 311 4e-85
SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.) 304 7e-83
SB_48961| Best HMM Match : Tubulin (HMM E-Value=0) 270 8e-73
SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.) 241 4e-64
SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.) 192 3e-49
SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.) 183 2e-46
SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0) 180 1e-45
SB_5512| Best HMM Match : Tubulin (HMM E-Value=0) 173 2e-43
SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.) 140 2e-33
SB_17881| Best HMM Match : Tubulin (HMM E-Value=0) 130 1e-30
SB_47198| Best HMM Match : Tubulin (HMM E-Value=0) 128 8e-30
SB_17879| Best HMM Match : Tubulin (HMM E-Value=0) 128 8e-30
SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.) 104 9e-23
SB_39308| Best HMM Match : Tubulin (HMM E-Value=0) 100 2e-21
SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.) 95 5e-20
SB_59740| Best HMM Match : Tubulin (HMM E-Value=2.1e-25) 89 5e-18
SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24) 83 2e-16
SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27) 78 1e-14
SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.) 74 2e-13
SB_25311| Best HMM Match : Tubulin (HMM E-Value=0) 57 2e-08
SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44) 42 9e-04
SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32) 30 2.2
SB_50612| Best HMM Match : RVT_1 (HMM E-Value=2.3e-26) 29 6.8
SB_1004| Best HMM Match : CPSase_sm_chain (HMM E-Value=0) 28 8.9
>SB_19437| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 885
Score = 321 bits (789), Expect = 4e-88
Identities = 160/233 (68%), Positives = 166/233 (71%), Gaps = 1/233 (0%)
Frame = +2
Query: 155 MRXCISVHVGXAGVQXGNACWELYCLEHGIQPDGXMPTDKTXXXXXXSFNTFFSETGAGK 334
MR CIS+HVG AGVQ GNACWELYCLEHGIQPDG MP+DKT SFNTFFSETGAGK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 335 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEXAAXNYARGXYTIGKEIVDLVLD 514
HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQL+TGKE AA NYARG YT+GKEIVDLVLD
Sbjct: 61 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLVTGKEDAANNYARGHYTVGKEIVDLVLD 120
Query: 515 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGXKSKXEFXIYXXXXXXXX 694
RIRKLADQCTGLQGFLIFH LLMERLSVDYG KSK EF IY
Sbjct: 121 RIRKLADQCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAIYPAPQVSTA 180
Query: 695 XXXXYXSIXXXXXXXXXSDCAFXVXNESXXDIXRRXSTL-XAHLXNLNXXXGQ 850
Y SI SDCAF V NE+ DI RR + NLN GQ
Sbjct: 181 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQ 233
Score = 320 bits (785), Expect = 1e-87
Identities = 160/232 (68%), Positives = 165/232 (71%), Gaps = 1/232 (0%)
Frame = +2
Query: 158 RXCISVHVGXAGVQXGNACWELYCLEHGIQPDGXMPTDKTXXXXXXSFNTFFSETGAGKH 337
R CIS+HVG AGVQ GNACWELYCLEHGIQPDG MP+DKT SFNTFFSETGAGKH
Sbjct: 435 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 494
Query: 338 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEXAAXNYARGXYTIGKEIVDLVLDR 517
VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKE AA NYARG YT+GKEIVDLVLDR
Sbjct: 495 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIVDLVLDR 554
Query: 518 IRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGXKSKXEFXIYXXXXXXXXX 697
IRKLADQCTGLQGFLIFH LLMERLSVDYG KSK EF IY
Sbjct: 555 IRKLADQCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAIYPAPQVSTAV 614
Query: 698 XXXYXSIXXXXXXXXXSDCAFXVXNESXXDIXRRXSTL-XAHLXNLNXXXGQ 850
Y SI SDCAF V NE+ DI RR + NLN GQ
Sbjct: 615 VEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQ 666
>SB_2674| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 1036
Score = 321 bits (789), Expect = 4e-88
Identities = 163/235 (69%), Positives = 166/235 (70%), Gaps = 1/235 (0%)
Frame = +2
Query: 149 IKMRXCISVHVGXAGVQXGNACWELYCLEHGIQPDGXMPTDKTXXXXXXSFNTFFSETGA 328
I R CISVHVG AGVQ GNACWELYCLEHGIQPDG MP+DKT SFNTFFSETGA
Sbjct: 63 ILQRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGA 122
Query: 329 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEXAAXNYARGXYTIGKEIVDLV 508
GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKE AA NYARG YTIGKEIVDLV
Sbjct: 123 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLV 182
Query: 509 LDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGXKSKXEFXIYXXXXXX 688
LDRIRKLADQCTGLQGFLIFH LLMERLSVDYG KSK EF IY
Sbjct: 183 LDRIRKLADQCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAIYPAPQIS 242
Query: 689 XXXXXXYXSIXXXXXXXXXSDCAFXVXNESXXDIXRRXSTL-XAHLXNLNXXXGQ 850
Y SI SDCAF V NE+ DI RR + NLN GQ
Sbjct: 243 TAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLMGQ 297
Score = 319 bits (783), Expect = 2e-87
Identities = 158/233 (67%), Positives = 166/233 (71%), Gaps = 1/233 (0%)
Frame = +2
Query: 155 MRXCISVHVGXAGVQXGNACWELYCLEHGIQPDGXMPTDKTXXXXXXSFNTFFSETGAGK 334
+R CIS+HVG AGVQ GNACWELYCLEHGIQPDG MP+DKT SFNTFFSETGAGK
Sbjct: 586 VRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 645
Query: 335 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEXAAXNYARGXYTIGKEIVDLVLD 514
HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKE AA NYARG YT+GKE++DLVLD
Sbjct: 646 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLD 705
Query: 515 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGXKSKXEFXIYXXXXXXXX 694
RIRKLADQCTGLQGFLIFH LLMERLSVDYG KSK EF IY
Sbjct: 706 RIRKLADQCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAIYPAPQVSTA 765
Query: 695 XXXXYXSIXXXXXXXXXSDCAFXVXNESXXDIXRRXSTL-XAHLXNLNXXXGQ 850
Y SI SDCAF V NE+ DI RR + NLN GQ
Sbjct: 766 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQ 818
Score = 138 bits (334), Expect = 6e-33
Identities = 61/73 (83%), Positives = 63/73 (86%)
Frame = +2
Query: 158 RXCISVHVGXAGVQXGNACWELYCLEHGIQPDGXMPTDKTXXXXXXSFNTFFSETGAGKH 337
R CIS+HVG AGVQ GNACWELYCLEHGIQPDG MP+DKT SFNTFFSETGAGKH
Sbjct: 514 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 573
Query: 338 VPRAVFVDLEPTV 376
VPRAVFVDLEPTV
Sbjct: 574 VPRAVFVDLEPTV 586
>SB_2003| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 451
Score = 320 bits (785), Expect = 1e-87
Identities = 160/233 (68%), Positives = 165/233 (70%), Gaps = 1/233 (0%)
Frame = +2
Query: 155 MRXCISVHVGXAGVQXGNACWELYCLEHGIQPDGXMPTDKTXXXXXXSFNTFFSETGAGK 334
MR CIS+HVG AGVQ GNACWELYCLEHGIQPDG MP+DKT SFNTFFSETGAGK
Sbjct: 1 MRECISIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 335 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEXAAXNYARGXYTIGKEIVDLVLD 514
HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKE AA NYARG YTIGKEI+DLVLD
Sbjct: 61 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 120
Query: 515 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGXKSKXEFXIYXXXXXXXX 694
R RKLADQCTGLQGFLIFH LLMERLSVDYG KSK EF IY
Sbjct: 121 RCRKLADQCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAIYPAPQISTA 180
Query: 695 XXXXYXSIXXXXXXXXXSDCAFXVXNESXXDIXRRXSTL-XAHLXNLNXXXGQ 850
Y SI SDCAF V NE+ DI RR + NLN GQ
Sbjct: 181 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIDRPTYTNLNRLIGQ 233
>SB_34400| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 380
Score = 319 bits (784), Expect = 2e-87
Identities = 159/232 (68%), Positives = 165/232 (71%), Gaps = 1/232 (0%)
Frame = +2
Query: 158 RXCISVHVGXAGVQXGNACWELYCLEHGIQPDGXMPTDKTXXXXXXSFNTFFSETGAGKH 337
R CIS+HVG AGVQ GNACWELYCLEHGIQPDG MP+DKT SFNTFFSETGAGKH
Sbjct: 1 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 60
Query: 338 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEXAAXNYARGXYTIGKEIVDLVLDR 517
VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKE AA NYARG YT+GKEI+DLVLDR
Sbjct: 61 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIIDLVLDR 120
Query: 518 IRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGXKSKXEFXIYXXXXXXXXX 697
IRKLADQCTGLQGFLIFH LLMERLSVDYG KSK EF IY
Sbjct: 121 IRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAV 180
Query: 698 XXXYXSIXXXXXXXXXSDCAFXVXNESXXDIXRRXSTL-XAHLXNLNXXXGQ 850
Y SI SDCAF V NE+ DI RR + NLN GQ
Sbjct: 181 VEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQ 232
>SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1231
Score = 317 bits (778), Expect = 9e-87
Identities = 158/232 (68%), Positives = 164/232 (70%), Gaps = 1/232 (0%)
Frame = +2
Query: 158 RXCISVHVGXAGVQXGNACWELYCLEHGIQPDGXMPTDKTXXXXXXSFNTFFSETGAGKH 337
R CISVHVG AGVQ GNACWELYCLEHGIQPDG MP+DKT SFNTFFSETGAGKH
Sbjct: 806 RECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 865
Query: 338 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEXAAXNYARGXYTIGKEIVDLVLDR 517
VPRAVF DLEPTVVDEVRTGTYRQLFHPEQLITGKE AA NYARG YT+GKE++DLVLDR
Sbjct: 866 VPRAVFADLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEMIDLVLDR 925
Query: 518 IRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGXKSKXEFXIYXXXXXXXXX 697
IRKLADQCTGLQGFLIFH LLMERLSVDYG KSK EF IY
Sbjct: 926 IRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQISTAV 985
Query: 698 XXXYXSIXXXXXXXXXSDCAFXVXNESXXDIXRRXSTL-XAHLXNLNXXXGQ 850
Y SI SDCAF V NE+ DI RR + NLN GQ
Sbjct: 986 VEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQ 1037
Score = 307 bits (754), Expect = 7e-84
Identities = 147/214 (68%), Positives = 157/214 (73%)
Frame = +2
Query: 158 RXCISVHVGXAGVQXGNACWELYCLEHGIQPDGXMPTDKTXXXXXXSFNTFFSETGAGKH 337
R CIS+HVG AGVQ GNACWELYCLEHGIQPDG MP+DKT +FNTFF+ETGAGKH
Sbjct: 373 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFAETGAGKH 432
Query: 338 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEXAAXNYARGXYTIGKEIVDLVLDR 517
VPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLITGKE AA NYARG YT+GKE +D+VLDR
Sbjct: 433 VPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEQIDIVLDR 492
Query: 518 IRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGXKSKXEFXIYXXXXXXXXX 697
+RKLAD CTGLQGFLIFH LLMERLSVDYG KSK EF IY
Sbjct: 493 LRKLADGCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPHISSAV 552
Query: 698 XXXYXSIXXXXXXXXXSDCAFXVXNESXXDIXRR 799
Y SI SDCAF V NE+ DI RR
Sbjct: 553 VEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRR 586
>SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 452
Score = 311 bits (764), Expect = 4e-85
Identities = 154/233 (66%), Positives = 163/233 (69%), Gaps = 1/233 (0%)
Frame = +2
Query: 155 MRXCISVHVGXAGVQXGNACWELYCLEHGIQPDGXMPTDKTXXXXXXSFNTFFSETGAGK 334
MR CISVHVG AGVQ GNACWELYCLEHGIQPDG MP+DKT SFNTFFSETG+GK
Sbjct: 1 MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGSGK 60
Query: 335 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEXAAXNYARGXYTIGKEIVDLVLD 514
HVPRAVF DLEPTVVDEVRTGTYRQLFHPEQLITGKE AA NYARG YT+GKE++D VLD
Sbjct: 61 HVPRAVFCDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEMIDTVLD 120
Query: 515 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGXKSKXEFXIYXXXXXXXX 694
R+RKLAD CTGLQGFLIFH LLMERLSVDYG KSK EF IY
Sbjct: 121 RLRKLADGCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAIYPAPQISTA 180
Query: 695 XXXXYXSIXXXXXXXXXSDCAFXVXNESXXDIXRRXSTL-XAHLXNLNXXXGQ 850
Y S+ SDCAF V NE+ DI RR + NLN GQ
Sbjct: 181 VVEPYNSVLTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQ 233
>SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 304 bits (746), Expect = 7e-83
Identities = 143/214 (66%), Positives = 157/214 (73%)
Frame = +2
Query: 158 RXCISVHVGXAGVQXGNACWELYCLEHGIQPDGXMPTDKTXXXXXXSFNTFFSETGAGKH 337
R C+S+HVG AGVQ GNACWELYCLEHGIQPDG MP+DKT SFNTFFSETGAGKH
Sbjct: 420 RECVSIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 479
Query: 338 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEXAAXNYARGXYTIGKEIVDLVLDR 517
VPRAVFVDLEP+V+DE+RTGTYRQLFHPEQLITGKE AA NYARG YT+GK+ +D VLDR
Sbjct: 480 VPRAVFVDLEPSVIDEIRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKDHIDNVLDR 539
Query: 518 IRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGXKSKXEFXIYXXXXXXXXX 697
IRKLADQC+GLQGFL+FH LL+ERLSVDYG KSK EF IY
Sbjct: 540 IRKLADQCSGLQGFLVFHSFGGGTGSGFSALLLERLSVDYGKKSKLEFAIYPAPQISTAV 599
Query: 698 XXXYXSIXXXXXXXXXSDCAFXVXNESXXDIXRR 799
Y S+ SDCAF V NE+ DI RR
Sbjct: 600 VEPYNSVLTTHTTLEHSDCAFMVDNEAIYDICRR 633
Score = 288 bits (707), Expect = 4e-78
Identities = 142/217 (65%), Positives = 152/217 (70%), Gaps = 1/217 (0%)
Frame = +2
Query: 203 GNACWELYCLEHGIQPDGXMPTDKTXXXXXXSFNTFFSETGAGKHVPRAVFVDLEPTVVD 382
GNACWELYCLEHGIQPDG MP+DKT SFNTFFSETGAGKHVPRAVF DLEPTVVD
Sbjct: 2 GNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFCDLEPTVVD 61
Query: 383 EVRTGTYRQLFHPEQLITGKEXAAXNYARGXYTIGKEIVDLVLDRIRKLADQCTGLQGFL 562
EVRTGTYRQLFHPEQLITGKE AA NYARG YT+GK+++++VLDR+RKLADQCTGLQGFL
Sbjct: 62 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKQLIEIVLDRLRKLADQCTGLQGFL 121
Query: 563 IFHXXXXXXXXXXXXLLMERLSVDYGXKSKXEFXIYXXXXXXXXXXXXYXSIXXXXXXXX 742
IFH LLMERLSVDYG KSK EF IY Y SI
Sbjct: 122 IFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAIYPAPQISTAVVEPYNSILTTHTTLE 181
Query: 743 XSDCAFXVXNESXXDIXRRXSTL-XAHLXNLNXXXGQ 850
SDCAF V NE+ DI RR + NLN GQ
Sbjct: 182 HSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQ 218
>SB_48961| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 536
Score = 270 bits (663), Expect = 8e-73
Identities = 142/233 (60%), Positives = 150/233 (64%), Gaps = 1/233 (0%)
Frame = +2
Query: 155 MRXCISVHVGXAGVQXGNACWELYCLEHGIQPDGXMPTDKTXXXXXXSFNTFFSETGAGK 334
MR CIS+HVG AGVQ GNACWELYCLEHGIQPDG MP+DKT SFNTFFSETGAGK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTQGGGDDSFNTFFSETGAGK 60
Query: 335 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEXAAXNYARGXYTIGKEIVDLVLD 514
HVPRAVFVDLEPTVV PEQLITGKE AA NYARG YTIGK+ VD VLD
Sbjct: 61 HVPRAVFVDLEPTVV----------ALSPEQLITGKEDAANNYARGHYTIGKQQVDQVLD 110
Query: 515 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGXKSKXEFXIYXXXXXXXX 694
R+RKLADQC+GLQGF IFH LLMERLSVDYG KSK EF +Y
Sbjct: 111 RLRKLADQCSGLQGFFIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAVYPAPHIASA 170
Query: 695 XXXXYXSIXXXXXXXXXSDCAFXVXNESXXDIXRRXSTL-XAHLXNLNXXXGQ 850
Y SI SDCAF V NE+ DI RR + NLN GQ
Sbjct: 171 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPSYTNLNRLIGQ 223
>SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 417
Score = 241 bits (591), Expect = 4e-64
Identities = 122/198 (61%), Positives = 133/198 (67%), Gaps = 1/198 (0%)
Frame = +2
Query: 260 MPTDKTXXXXXXSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITG 439
MP+DKT SFNTFF+ETGAGKHVPRAVFVDLEPTV+DE+RTGTYRQLFHPEQL++G
Sbjct: 1 MPSDKTIGGGDDSFNTFFAETGAGKHVPRAVFVDLEPTVIDEIRTGTYRQLFHPEQLLSG 60
Query: 440 KEXAAXNYARGXYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLME 619
KE AA NYARG YT+GKE +DL LDRIRKLADQCTGLQGFLIFH LLME
Sbjct: 61 KEDAANNYARGHYTVGKEHIDLALDRIRKLADQCTGLQGFLIFHSFGGGTGSGFSSLLME 120
Query: 620 RLSVDYGXKSKXEFXIYXXXXXXXXXXXXYXSIXXXXXXXXXSDCAFXVXNESXXDIXRR 799
RLSVDYG KSK EF +Y Y SI SDCAF V NE+ DI RR
Sbjct: 121 RLSVDYGKKSKLEFAVYPAPQISTAVVEPYNSILSTHTTLEHSDCAFMVDNEAIYDICRR 180
Query: 800 XSTL-XAHLXNLNXXXGQ 850
+ NLN GQ
Sbjct: 181 NLDIERPTYTNLNRLIGQ 198
>SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1383
Score = 192 bits (468), Expect = 3e-49
Identities = 96/180 (53%), Positives = 114/180 (63%), Gaps = 1/180 (0%)
Frame = +2
Query: 314 SETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEXAAXNYARGXYTIGKE 493
SE AGK+VPRAV VDLEPTV+DEVRTG YR L+HPEQ+I+GKE AA NYARG YTIGKE
Sbjct: 965 SEAAAGKYVPRAVLVDLEPTVIDEVRTGMYRYLYHPEQMISGKEDAANNYARGHYTIGKE 1024
Query: 494 IVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGXKSKXEFXIYX 673
+V++V+D+IRK+ DQC+GLQGFLIFH L+ E LSVDYG KSK EF +Y
Sbjct: 1025 MVEVVMDKIRKMTDQCSGLQGFLIFHSFGGGTGSGFASLITEHLSVDYGKKSKLEFAVYP 1084
Query: 674 XXXXXXXXXXXYXSIXXXXXXXXXSDCAFXVXNESXXDIXRRXSTL-XAHLXNLNXXXGQ 850
Y S+ SDC F V NE+ D+ RR + NLN GQ
Sbjct: 1085 APHISTAVVEPYNSVLTTHTTLEHSDCTFMVDNEAIYDLCRRNLDVERPGYANLNRLIGQ 1144
>SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 183 bits (445), Expect = 2e-46
Identities = 96/160 (60%), Positives = 102/160 (63%), Gaps = 1/160 (0%)
Frame = +2
Query: 374 VVDEVRTGTYRQLFHPEQLITGKEXAAXNYARGXYTIGKEIVDLVLDRIRKLADQCTGLQ 553
+ DEVRTGTYRQLFHPEQLITGKE AA NYARG YT+GKE++DLVLDRIRKLADQCTGLQ
Sbjct: 11 LADEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKLADQCTGLQ 70
Query: 554 GFLIFHXXXXXXXXXXXXLLMERLSVDYGXKSKXEFXIYXXXXXXXXXXXXYXSIXXXXX 733
GFLIFH LLMERLSVDYG KSK EF IY Y SI
Sbjct: 71 GFLIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAIYPAPQISTAVVEPYNSILTTHT 130
Query: 734 XXXXSDCAFXVXNESXXDIXRRXSTL-XAHLXNLNXXXGQ 850
SDCAF V NE+ DI RR + NLN GQ
Sbjct: 131 TLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLMGQ 170
>SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 377
Score = 180 bits (438), Expect = 1e-45
Identities = 95/157 (60%), Positives = 100/157 (63%), Gaps = 1/157 (0%)
Frame = +2
Query: 383 EVRTGTYRQLFHPEQLITGKEXAAXNYARGXYTIGKEIVDLVLDRIRKLADQCTGLQGFL 562
EVRTGTYRQLFHPEQLITGKE AA NYARG YT+GKE++DLVLDRIRKLADQCTGLQGFL
Sbjct: 2 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKLADQCTGLQGFL 61
Query: 563 IFHXXXXXXXXXXXXLLMERLSVDYGXKSKXEFXIYXXXXXXXXXXXXYXSIXXXXXXXX 742
IFH LLMERLSVDYG KSK EF IY Y SI
Sbjct: 62 IFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAIYPAPQISTAVVEPYNSILTTHTTLE 121
Query: 743 XSDCAFXVXNESXXDIXRRXSTL-XAHLXNLNXXXGQ 850
SDCAF V NE+ DI RR + NLN GQ
Sbjct: 122 HSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLMGQ 158
>SB_5512| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 365
Score = 173 bits (421), Expect = 2e-43
Identities = 90/157 (57%), Positives = 98/157 (62%), Gaps = 1/157 (0%)
Frame = +2
Query: 383 EVRTGTYRQLFHPEQLITGKEXAAXNYARGXYTIGKEIVDLVLDRIRKLADQCTGLQGFL 562
E+RTGTYRQLFHPEQL++GKE AA NYARG YT+GKE +DL LDRIRKLADQCTGLQGFL
Sbjct: 2 EIRTGTYRQLFHPEQLLSGKEDAANNYARGHYTVGKEHIDLALDRIRKLADQCTGLQGFL 61
Query: 563 IFHXXXXXXXXXXXXLLMERLSVDYGXKSKXEFXIYXXXXXXXXXXXXYXSIXXXXXXXX 742
IFH LLMERLSVDYG KSK EF +Y Y SI
Sbjct: 62 IFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAVYPAPQISTAVVEPYNSILTTHTTLE 121
Query: 743 XSDCAFXVXNESXXDIXRRXSTL-XAHLXNLNXXXGQ 850
SDCAF V NE+ DI RR + NLN GQ
Sbjct: 122 HSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQ 158
>SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 140 bits (338), Expect = 2e-33
Identities = 62/79 (78%), Positives = 66/79 (83%)
Frame = +2
Query: 155 MRXCISVHVGXAGVQXGNACWELYCLEHGIQPDGXMPTDKTXXXXXXSFNTFFSETGAGK 334
MR CISVHVG AGVQ GNACWELYCLEHGIQPDG MP+DKT SFNTFFSETG GK
Sbjct: 1 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIDGGDDSFNTFFSETGGGK 60
Query: 335 HVPRAVFVDLEPTVVDEVR 391
HVPRAVFVDLEP+VV ++
Sbjct: 61 HVPRAVFVDLEPSVVGRMK 79
>SB_17881| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 458
Score = 130 bits (314), Expect = 1e-30
Identities = 71/216 (32%), Positives = 101/216 (46%)
Frame = +2
Query: 152 KMRXCISVHVGXAGVQXGNACWELYCLEHGIQPDGXMPTDKTXXXXXXSFNTFFSETGAG 331
KMR + G G Q G WE+ EHGI P G D N +++E G
Sbjct: 213 KMREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLER--INVYYNEATGG 270
Query: 332 KHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEXAAXNYARGXYTIGKEIVDLVL 511
K+VPRAV VDLEP +D VR+G + Q+F P+ + G+ A N+A+G YT G E+VD VL
Sbjct: 271 KYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVL 330
Query: 512 DRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGXKSKXEFXIYXXXXXXX 691
D +RK A+ C LQGF + H LL+ ++ +Y + F +
Sbjct: 331 DVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSD 390
Query: 692 XXXXXYXSIXXXXXXXXXSDCAFXVXNESXXDIXRR 799
Y + +D + + NE+ DI R
Sbjct: 391 TVVEPYNATLSVHQLVENTDETYCIDNEALYDICFR 426
>SB_47198| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 128 bits (308), Expect = 8e-30
Identities = 69/215 (32%), Positives = 100/215 (46%)
Frame = +2
Query: 155 MRXCISVHVGXAGVQXGNACWELYCLEHGIQPDGXMPTDKTXXXXXXSFNTFFSETGAGK 334
MR + G G Q G WE+ EHGI P G D N +++E GK
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLER--INVYYNEATGGK 58
Query: 335 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEXAAXNYARGXYTIGKEIVDLVLD 514
+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A N+A+G YT G E+VD VLD
Sbjct: 59 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 118
Query: 515 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGXKSKXEFXIYXXXXXXXX 694
+RK A+ C LQGF + H LL+ ++ +Y + F +
Sbjct: 119 VVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDT 178
Query: 695 XXXXYXSIXXXXXXXXXSDCAFXVXNESXXDIXRR 799
Y + +D + + NE+ DI R
Sbjct: 179 VVEPYNATLSVHQLVENTDETYCIDNEALYDICFR 213
>SB_17879| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 128 bits (308), Expect = 8e-30
Identities = 68/215 (31%), Positives = 102/215 (47%)
Frame = +2
Query: 155 MRXCISVHVGXAGVQXGNACWELYCLEHGIQPDGXMPTDKTXXXXXXSFNTFFSETGAGK 334
MR +S+ G G Q G WE+ EHGI P G D N +++E GK
Sbjct: 1 MREIVSLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLER--INVYYNEATGGK 58
Query: 335 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEXAAXNYARGXYTIGKEIVDLVLD 514
+VPR+V +DLEP +D VR+G + Q+F P+ + G+ A N+A+G YT G E++D VLD
Sbjct: 59 YVPRSVLIDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELMDSVLD 118
Query: 515 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGXKSKXEFXIYXXXXXXXX 694
+RK A+ C +QGF + H LL+ ++ +Y + F I
Sbjct: 119 VVRKEAESCDCIQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSIVPSPKVSDT 178
Query: 695 XXXXYXSIXXXXXXXXXSDCAFXVXNESXXDIXRR 799
Y + +D + + NE+ DI R
Sbjct: 179 VVEPYNATLSVHQLVENTDETYCIDNEALYDICFR 213
>SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 602
Score = 104 bits (250), Expect = 9e-23
Identities = 43/61 (70%), Positives = 50/61 (81%)
Frame = +2
Query: 155 MRXCISVHVGXAGVQXGNACWELYCLEHGIQPDGXMPTDKTXXXXXXSFNTFFSETGAGK 334
MR C+S+HVG AGVQ GNACWELYCLEHGIQPDG MP+D++ SF+TFFSET +GK
Sbjct: 196 MRECLSIHVGQAGVQIGNACWELYCLEHGIQPDGHMPSDQSADRCDDSFSTFFSETASGK 255
Query: 335 H 337
H
Sbjct: 256 H 256
Score = 87.8 bits (208), Expect = 1e-17
Identities = 50/110 (45%), Positives = 55/110 (50%), Gaps = 1/110 (0%)
Frame = +2
Query: 524 KLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGXKSKXEFXIYXXXXXXXXXXX 703
K ADQCTGLQGFL+FH LLMERLSVDYG +SK EF +Y
Sbjct: 255 KHADQCTGLQGFLVFHSFGGGTGSGFSSLLMERLSVDYGKRSKLEFAVYPAPQISTAVVE 314
Query: 704 XYXSIXXXXXXXXXSDCAFXVXNESXXDIXRRXSTL-XAHLXNLNXXXGQ 850
Y SI SDCAF V NE+ DI RR + NLN GQ
Sbjct: 315 PYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQ 364
>SB_39308| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 391
Score = 100 bits (239), Expect = 2e-21
Identities = 52/157 (33%), Positives = 78/157 (49%)
Frame = +2
Query: 329 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEXAAXNYARGXYTIGKEIVDLV 508
GK+VPRAV VDLEP +D VR+G + Q+F P+ + G+ A N+A+G YT G E+VD V
Sbjct: 2 GKYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 61
Query: 509 LDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGXKSKXEFXIYXXXXXX 688
LD +RK A+ C +QGF + H LL+ ++ +Y + F +
Sbjct: 62 LDVVRKEAESCDCIQGFQLTHSLGGGTGSGMVTLLILKIREEYPDRIMNTFSVVPSPKVS 121
Query: 689 XXXXXXYXSIXXXXXXXXXSDCAFXVXNESXXDIXRR 799
Y + +D + + NE+ DI R
Sbjct: 122 DTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFR 158
>SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 50
Score = 95.5 bits (227), Expect = 5e-20
Identities = 43/49 (87%), Positives = 46/49 (93%)
Frame = +2
Query: 383 EVRTGTYRQLFHPEQLITGKEXAAXNYARGXYTIGKEIVDLVLDRIRKL 529
EVRTGTYRQLFHPEQLITGKE AA NYARG YT+GKE++DLVLDRIRKL
Sbjct: 2 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKL 50
>SB_59740| Best HMM Match : Tubulin (HMM E-Value=2.1e-25)
Length = 139
Score = 89.0 bits (211), Expect = 5e-18
Identities = 52/108 (48%), Positives = 54/108 (50%), Gaps = 1/108 (0%)
Frame = +2
Query: 530 ADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGXKSKXEFXIYXXXXXXXXXXXXY 709
ADQCTGLQGFLIFH LLMERLSVDYG KSK EF IY Y
Sbjct: 1 ADQCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAIYPAPQISTAVVEPY 60
Query: 710 XSIXXXXXXXXXSDCAFXVXNESXXDIXRRXSTL-XAHLXNLNXXXGQ 850
SI SDCAF V NE+ DI RR + NLN GQ
Sbjct: 61 NSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLMGQ 108
>SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24)
Length = 149
Score = 83.4 bits (197), Expect = 2e-16
Identities = 37/49 (75%), Positives = 42/49 (85%)
Frame = +2
Query: 383 EVRTGTYRQLFHPEQLITGKEXAAXNYARGXYTIGKEIVDLVLDRIRKL 529
EVR GTYR LFHP+QLITGKE AA NYARG YT+GKE +DL L++IRKL
Sbjct: 2 EVRMGTYRDLFHPDQLITGKEDAANNYARGHYTVGKEHIDLTLEKIRKL 50
>SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27)
Length = 144
Score = 77.8 bits (183), Expect = 1e-14
Identities = 34/113 (30%), Positives = 60/113 (53%)
Frame = +2
Query: 329 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEXAAXNYARGXYTIGKEIVDLV 508
G++VPR++ VDLEP +D VR G +F P+ + + AA N+A+G Y+ G E++D +
Sbjct: 13 GRYVPRSILVDLEPGTMDAVRGGPLGNMFRPDNFVNSQSGAANNWAKGHYSEGAELIDNI 72
Query: 509 LDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGXKSKXEFXI 667
D +RK A+ C +QG + L++ ++ +Y + F +
Sbjct: 73 FDVLRKEAENCDCMQGVQLIQALGGGTGSGLGTLILSKIREEYPDRILSAFSV 125
>SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 112
Score = 73.7 bits (173), Expect = 2e-13
Identities = 35/93 (37%), Positives = 48/93 (51%)
Frame = +2
Query: 155 MRXCISVHVGXAGVQXGNACWELYCLEHGIQPDGXMPTDKTXXXXXXSFNTFFSETGAGK 334
MR + G G Q G WE+ EHGI P G D N +++E GK
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLER--INVYYNEATGGK 58
Query: 335 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLI 433
+VPRA+ VDLEP +D VR+G + Q+F P+ +
Sbjct: 59 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFV 91
>SB_25311| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 629
Score = 56.8 bits (131), Expect = 2e-08
Identities = 32/114 (28%), Positives = 50/114 (43%)
Frame = +2
Query: 449 AAXNYARGXYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLS 628
AA N+A+G YT G E++D +D IRKLA+ C +QGF I H LL+ ++
Sbjct: 5 AANNWAKGFYTEGAELMDSGMDCIRKLAENCDTVQGFQIAHSLGGGTGSGLGSLLLSKIR 64
Query: 629 VDYGXKSKXEFXIYXXXXXXXXXXXXYXSIXXXXXXXXXSDCAFXVXNESXXDI 790
+Y + F + Y + +D A + NE+ +I
Sbjct: 65 EEYPDRLVSSFCVLPSPLVSETVTEPYNATLSFHQLVDVADAAICIDNEALYNI 118
>SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44)
Length = 474
Score = 41.5 bits (93), Expect = 9e-04
Identities = 24/78 (30%), Positives = 42/78 (53%), Gaps = 5/78 (6%)
Frame = +2
Query: 344 RAVFVDLEPTVVDEV-----RTGTYRQLFHPEQLITGKEXAAXNYARGXYTIGKEIVDLV 508
RAV +D+E V+ + ++GT+R + Q + K + N+A G G + +D V
Sbjct: 67 RAVSIDMESKVISQTLSEASKSGTWR--YPKGQQFSQKRGSGNNWAHGFSEHGPKSIDKV 124
Query: 509 LDRIRKLADQCTGLQGFL 562
LD +++ ++C L GFL
Sbjct: 125 LDLVQREVEKCDRLDGFL 142
>SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32)
Length = 488
Score = 30.3 bits (65), Expect = 2.2
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +2
Query: 344 RAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEXAAXNY 463
RAV +D+E VV+ + G +F +QLIT N+
Sbjct: 76 RAVLIDMEEGVVNNILKGPLHDVFDCQQLITDVSGCGNNW 115
>SB_50612| Best HMM Match : RVT_1 (HMM E-Value=2.3e-26)
Length = 904
Score = 28.7 bits (61), Expect = 6.8
Identities = 22/74 (29%), Positives = 31/74 (41%), Gaps = 3/74 (4%)
Frame = +2
Query: 158 RXCISVHVGXAGVQXGNACWELYCLEHGIQPDG-XMPTDKT-XXXXXXSFNTFFSETGAG 331
+ C S + +GV+ G W L + GIQP P+D + +NT +
Sbjct: 237 KPCASKKILASGVRYGKLTWTLGAMTSGIQPSTVSAPSDDSDCNVLCDQYNTVLNHF-IE 295
Query: 332 KHVP-RAVFVDLEP 370
KH P R V L P
Sbjct: 296 KHAPVRTFSVTLRP 309
>SB_1004| Best HMM Match : CPSase_sm_chain (HMM E-Value=0)
Length = 2007
Score = 28.3 bits (60), Expect = 8.9
Identities = 18/45 (40%), Positives = 26/45 (57%)
Frame = +3
Query: 507 FWTESASSLTSVPVCKDS*SSTPSVEVPALGSLPY*WSVSPLTTA 641
FW+ S+SS T VP +T + VP++G Y VSP+T+A
Sbjct: 165 FWSSSSSSPT-VPN-----KTTNGISVPSVGRSSYSTRVSPITSA 203
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,403,045
Number of Sequences: 59808
Number of extensions: 331185
Number of successful extensions: 643
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 590
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 637
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2586032617
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -