Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP02_F_P07
(900 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY334011-1|AAR01136.1| 188|Anopheles gambiae beta-tubulin protein. 46 2e-06
AY334010-1|AAR01135.1| 188|Anopheles gambiae beta-tubulin protein. 46 2e-06
AY334009-1|AAR01134.1| 188|Anopheles gambiae beta-tubulin protein. 46 2e-06
AY334008-1|AAR01133.1| 188|Anopheles gambiae beta-tubulin protein. 46 2e-06
U50468-1|AAA93472.1| 91|Anopheles gambiae protein ( Anopheles ... 44 8e-06
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript... 23 0.74
AY028784-1|AAK32958.2| 499|Anopheles gambiae cytochrome P450 pr... 23 9.6
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote... 23 9.6
>AY334011-1|AAR01136.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 45.6 bits (103), Expect = 2e-06
Identities = 27/108 (25%), Positives = 43/108 (39%)
Frame = +2
Query: 476 YTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGXKSKX 655
YT G E+VD VLD +RK + C LQGF + H LL+ ++ +Y +
Sbjct: 2 YTEGAELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMN 61
Query: 656 EFXIYXXXXXXXXXXXXYXSIXXXXXXXXXSDCAFXVXNESXXDIXRR 799
+ + Y + +D + + NE+ DI R
Sbjct: 62 TYSVVPSPKVSDTVVEPYNATLSIHQLVENTDETYCIDNEALYDICFR 109
>AY334010-1|AAR01135.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 45.6 bits (103), Expect = 2e-06
Identities = 27/108 (25%), Positives = 43/108 (39%)
Frame = +2
Query: 476 YTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGXKSKX 655
YT G E+VD VLD +RK + C LQGF + H LL+ ++ +Y +
Sbjct: 2 YTEGAELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMN 61
Query: 656 EFXIYXXXXXXXXXXXXYXSIXXXXXXXXXSDCAFXVXNESXXDIXRR 799
+ + Y + +D + + NE+ DI R
Sbjct: 62 TYSVVPSPKVSDTVVEPYNATLSIHQLVENTDETYCIDNEALYDICFR 109
>AY334009-1|AAR01134.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 45.6 bits (103), Expect = 2e-06
Identities = 27/108 (25%), Positives = 43/108 (39%)
Frame = +2
Query: 476 YTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGXKSKX 655
YT G E+VD VLD +RK + C LQGF + H LL+ ++ +Y +
Sbjct: 2 YTEGAELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMN 61
Query: 656 EFXIYXXXXXXXXXXXXYXSIXXXXXXXXXSDCAFXVXNESXXDIXRR 799
+ + Y + +D + + NE+ DI R
Sbjct: 62 TYSVVPSPKVSDTVVEPYNATLSIHQLVENTDETYCIDNEALYDICFR 109
>AY334008-1|AAR01133.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 45.6 bits (103), Expect = 2e-06
Identities = 27/108 (25%), Positives = 43/108 (39%)
Frame = +2
Query: 476 YTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGXKSKX 655
YT G E+VD VLD +RK + C LQGF + H LL+ ++ +Y +
Sbjct: 2 YTEGAELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMN 61
Query: 656 EFXIYXXXXXXXXXXXXYXSIXXXXXXXXXSDCAFXVXNESXXDIXRR 799
+ + Y + +D + + NE+ DI R
Sbjct: 62 TYSVVPSPKVSDTVVEPYNATLSIHQLVENTDETYCIDNEALYDICFR 109
>U50468-1|AAA93472.1| 91|Anopheles gambiae protein ( Anopheles
gambiae putativetubulin alpha chain mRNA, complete cds.
).
Length = 91
Score = 43.6 bits (98), Expect = 8e-06
Identities = 17/22 (77%), Positives = 18/22 (81%)
Frame = +2
Query: 155 MRXCISVHVGXAGVQXGNACWE 220
MR CISVHVG AGVQ GN CW+
Sbjct: 1 MRECISVHVGQAGVQIGNPCWD 22
Score = 38.7 bits (86), Expect = 2e-04
Identities = 25/68 (36%), Positives = 27/68 (39%)
Frame = +3
Query: 210 PAGSFTAWSTASSLMAXCPQTRPSGVEXXLSTLSSARPELASTYPVXXXXXXXXXXXXXX 389
P T WS AS+ CP+TR S ST SS R AST PV
Sbjct: 19 PCWDCTVWSMASNRTVRCPRTRRSEAVMTRSTPSSPRLAQASTCPVPCSSIWSRPSSMRC 78
Query: 390 XXAHTDSC 413
A T SC
Sbjct: 79 APARTASC 86
>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
protein.
Length = 1248
Score = 23.4 bits (48), Expect(2) = 0.74
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = +3
Query: 261 CPQTRPSGVEXXLSTLSSARPELAS 335
C RPS ++ ++ S RP+LA+
Sbjct: 164 CGSARPSRIDVAFASPSICRPDLAA 188
Score = 21.8 bits (44), Expect(2) = 0.74
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +3
Query: 204 VMPAGSFTAWSTASSLMAXCPQTRPSGV 287
V+ AG F AW TA +T+P G+
Sbjct: 116 VLLAGDFNAWHTAWG----SERTKPKGI 139
>AY028784-1|AAK32958.2| 499|Anopheles gambiae cytochrome P450
protein.
Length = 499
Score = 23.4 bits (48), Expect = 9.6
Identities = 9/19 (47%), Positives = 10/19 (52%)
Frame = +1
Query: 283 GWXRFFQHFLQRDRSWQAR 339
GW + HF QR R W R
Sbjct: 12 GWLWIYLHFNQRYRFWVER 30
>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
protein.
Length = 1645
Score = 23.4 bits (48), Expect = 9.6
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +1
Query: 184 PSRSPXR*CLLGALLPGARHPA*WPDAHRQDXR 282
P+ P + L+ +LP + PA P R+D R
Sbjct: 1107 PAVEPAKKTLVATILPNSAKPAQQPPPLRRDAR 1139
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 644,232
Number of Sequences: 2352
Number of extensions: 10907
Number of successful extensions: 15
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 97160985
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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