Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP02_F_P07
(900 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 293 1e-79
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 293 1e-79
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 291 4e-79
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 291 4e-79
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 285 3e-77
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 285 3e-77
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 270 6e-73
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 134 8e-32
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 132 2e-31
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 131 5e-31
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 130 1e-30
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 130 1e-30
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 128 5e-30
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 128 7e-30
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 127 9e-30
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 122 3e-28
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 91 1e-18
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 90 2e-18
At1g24460.1 68414.m03081 myosin-related contains TIGRFAM TIGR016... 29 3.2
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 293 bits (718), Expect = 1e-79
Identities = 142/233 (60%), Positives = 161/233 (69%), Gaps = 1/233 (0%)
Frame = +2
Query: 155 MRXCISVHVGXAGVQXGNACWELYCLEHGIQPDGXMPTDKTXXXXXXSFNTFFSETGAGK 334
MR CIS+H+G AG+Q GNACWELYCLEHGIQPDG MP+DKT +FNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 335 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEXAAXNYARGXYTIGKEIVDLVLD 514
HVPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKE AA N+ARG YTIGKEIVDL LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 515 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGXKSKXEFXIYXXXXXXXX 694
RIRKLAD CTGLQGFL+F+ LL+ERLSVDYG KSK F +Y
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 180
Query: 695 XXXXYXSIXXXXXXXXXSDCAFXVXNESXXDIXRRXSTL-XAHLXNLNXXXGQ 850
Y S+ +D + + NE+ DI RR ++ NLN Q
Sbjct: 181 VVEPYNSVLSTHSLLEHTDVSILLDNEAIYDICRRSLSIERPTYTNLNRLVSQ 233
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 293 bits (718), Expect = 1e-79
Identities = 142/233 (60%), Positives = 161/233 (69%), Gaps = 1/233 (0%)
Frame = +2
Query: 155 MRXCISVHVGXAGVQXGNACWELYCLEHGIQPDGXMPTDKTXXXXXXSFNTFFSETGAGK 334
MR CIS+H+G AG+Q GNACWELYCLEHGIQPDG MP+DKT +FNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 335 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEXAAXNYARGXYTIGKEIVDLVLD 514
HVPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKE AA N+ARG YTIGKEIVDL LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 515 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGXKSKXEFXIYXXXXXXXX 694
RIRKLAD CTGLQGFL+F+ LL+ERLSVDYG KSK F +Y
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 180
Query: 695 XXXXYXSIXXXXXXXXXSDCAFXVXNESXXDIXRRXSTL-XAHLXNLNXXXGQ 850
Y S+ +D + + NE+ DI RR ++ NLN Q
Sbjct: 181 VVEPYNSVLSTHSLLEHTDVSILLDNEAIYDICRRSLSIERPTYTNLNRLVSQ 233
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 291 bits (714), Expect = 4e-79
Identities = 138/215 (64%), Positives = 154/215 (71%)
Frame = +2
Query: 155 MRXCISVHVGXAGVQXGNACWELYCLEHGIQPDGXMPTDKTXXXXXXSFNTFFSETGAGK 334
MR CIS+H+G AG+Q GNACWELYCLEHGIQPDG MP DKT +FNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 335 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEXAAXNYARGXYTIGKEIVDLVLD 514
HVPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKE AA N+ARG YTIGKEIVDL LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 515 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGXKSKXEFXIYXXXXXXXX 694
RIRKLAD CTGLQGFL+F+ LL+ERLSVDYG KSK F +Y
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 180
Query: 695 XXXXYXSIXXXXXXXXXSDCAFXVXNESXXDIXRR 799
Y S+ +D + + NE+ DI RR
Sbjct: 181 VVEPYNSVLSTHSLLEHTDVSILLDNEAIYDICRR 215
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 291 bits (714), Expect = 4e-79
Identities = 138/215 (64%), Positives = 154/215 (71%)
Frame = +2
Query: 155 MRXCISVHVGXAGVQXGNACWELYCLEHGIQPDGXMPTDKTXXXXXXSFNTFFSETGAGK 334
MR CIS+H+G AG+Q GNACWELYCLEHGIQPDG MP DKT +FNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 335 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEXAAXNYARGXYTIGKEIVDLVLD 514
HVPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKE AA N+ARG YTIGKEIVDL LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 515 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGXKSKXEFXIYXXXXXXXX 694
RIRKLAD CTGLQGFL+F+ LL+ERLSVDYG KSK F +Y
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 180
Query: 695 XXXXYXSIXXXXXXXXXSDCAFXVXNESXXDIXRR 799
Y S+ +D + + NE+ DI RR
Sbjct: 181 VVEPYNSVLSTHSLLEHTDVSILLDNEAIYDICRR 215
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 285 bits (699), Expect = 3e-77
Identities = 135/215 (62%), Positives = 153/215 (71%)
Frame = +2
Query: 155 MRXCISVHVGXAGVQXGNACWELYCLEHGIQPDGXMPTDKTXXXXXXSFNTFFSETGAGK 334
MR IS+H+G AG+Q GN+CWELYCLEHGIQPDG MP+D T +FNTFFSETGAGK
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 335 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEXAAXNYARGXYTIGKEIVDLVLD 514
HVPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKE AA N+ARG YT+GKEIVDL LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD 120
Query: 515 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGXKSKXEFXIYXXXXXXXX 694
R+RKLAD CTGLQGFL+F+ LL+ERLSVDYG KSK F IY
Sbjct: 121 RVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTA 180
Query: 695 XXXXYXSIXXXXXXXXXSDCAFXVXNESXXDIXRR 799
Y S+ +D A + NE+ DI RR
Sbjct: 181 VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRR 215
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 285 bits (699), Expect = 3e-77
Identities = 135/215 (62%), Positives = 153/215 (71%)
Frame = +2
Query: 155 MRXCISVHVGXAGVQXGNACWELYCLEHGIQPDGXMPTDKTXXXXXXSFNTFFSETGAGK 334
MR IS+H+G AG+Q GN+CWELYCLEHGIQPDG MP+D T +FNTFFSETGAGK
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 335 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEXAAXNYARGXYTIGKEIVDLVLD 514
HVPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKE AA N+ARG YT+GKEIVDL LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD 120
Query: 515 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGXKSKXEFXIYXXXXXXXX 694
R+RKLAD CTGLQGFL+F+ LL+ERLSVDYG KSK F IY
Sbjct: 121 RVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTA 180
Query: 695 XXXXYXSIXXXXXXXXXSDCAFXVXNESXXDIXRR 799
Y S+ +D A + NE+ DI RR
Sbjct: 181 VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRR 215
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 270 bits (663), Expect = 6e-73
Identities = 126/215 (58%), Positives = 150/215 (69%)
Frame = +2
Query: 155 MRXCISVHVGXAGVQXGNACWELYCLEHGIQPDGXMPTDKTXXXXXXSFNTFFSETGAGK 334
MR IS+H+G AG+Q GN+CWELYCLEHGIQPDG MP+D T +FNTFFSET +G+
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGTMPSDSTVGACHDAFNTFFSETSSGQ 60
Query: 335 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEXAAXNYARGXYTIGKEIVDLVLD 514
HVPRAVF+DLEPTV+DEVRTGTYRQLFHPEQLI+GKE AA N+ARG YT+G+EIVD L+
Sbjct: 61 HVPRAVFLDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDTCLE 120
Query: 515 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGXKSKXEFXIYXXXXXXXX 694
R+RKLAD CTGLQGFL+F+ LL+ERLSVD+G KSK F IY
Sbjct: 121 RLRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDFGKKSKLGFTIYPSPQVSTA 180
Query: 695 XXXXYXSIXXXXXXXXXSDCAFXVXNESXXDIXRR 799
Y S+ +D + NE+ DI RR
Sbjct: 181 VVEPYNSVLSTHSLLEHTDVVVLLDNEAIYDICRR 215
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 134 bits (324), Expect = 8e-32
Identities = 68/215 (31%), Positives = 103/215 (47%)
Frame = +2
Query: 155 MRXCISVHVGXAGVQXGNACWELYCLEHGIQPDGXMPTDKTXXXXXXSFNTFFSETGAGK 334
MR + V G G Q G+ WE+ C EHG+ P G D N +++E G+
Sbjct: 1 MREILHVQGGQCGNQIGSKFWEVICDEHGVDPTGRYNGDSADLQLER-INVYYNEASGGR 59
Query: 335 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEXAAXNYARGXYTIGKEIVDLVLD 514
+VPRAV +DLEP +D +R+G Y Q+F P+ + G+ A N+A+G YT G E++D VLD
Sbjct: 60 YVPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLD 119
Query: 515 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGXKSKXEFXIYXXXXXXXX 694
+RK A+ C LQGF + H LL+ ++ +Y + F ++
Sbjct: 120 VVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDT 179
Query: 695 XXXXYXSIXXXXXXXXXSDCAFXVXNESXXDIXRR 799
Y + +D + NE+ DI R
Sbjct: 180 VVEPYNATLSVHQLVENADECMVLDNEALYDICFR 214
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 132 bits (320), Expect = 2e-31
Identities = 68/215 (31%), Positives = 103/215 (47%)
Frame = +2
Query: 155 MRXCISVHVGXAGVQXGNACWELYCLEHGIQPDGXMPTDKTXXXXXXSFNTFFSETGAGK 334
MR + + G G Q G+ WE+ C EHGI P G + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYVGNSDLQLERV--NVYYNEASCGR 58
Query: 335 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEXAAXNYARGXYTIGKEIVDLVLD 514
+VPRA+ +DLEP +D VRTG Y Q+F P+ + G+ A N+A+G YT G E++D VLD
Sbjct: 59 YVPRAILMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLD 118
Query: 515 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGXKSKXEFXIYXXXXXXXX 694
+RK A+ C LQGF + H LL+ ++ +Y + F ++
Sbjct: 119 VVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDT 178
Query: 695 XXXXYXSIXXXXXXXXXSDCAFXVXNESXXDIXRR 799
Y + +D + NE+ DI R
Sbjct: 179 VVEPYNATLSVHQLVENADECMVLDNEALYDICFR 213
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 131 bits (317), Expect = 5e-31
Identities = 67/215 (31%), Positives = 103/215 (47%)
Frame = +2
Query: 155 MRXCISVHVGXAGVQXGNACWELYCLEHGIQPDGXMPTDKTXXXXXXSFNTFFSETGAGK 334
MR + + G G Q G+ WE+ C EHGI G D T N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVICDEHGIDSTGRYSGD-TADLQLERINVYYNEASGGR 59
Query: 335 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEXAAXNYARGXYTIGKEIVDLVLD 514
+VPRAV +DLEP +D +R+G + Q+F P+ + G+ A N+A+G YT G E++D VLD
Sbjct: 60 YVPRAVLMDLEPGTMDSIRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLD 119
Query: 515 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGXKSKXEFXIYXXXXXXXX 694
+RK A+ C LQGF + H LL+ ++ +Y + F ++
Sbjct: 120 VVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDT 179
Query: 695 XXXXYXSIXXXXXXXXXSDCAFXVXNESXXDIXRR 799
Y + +D + NE+ DI R
Sbjct: 180 VVEPYNATLSVHQLVENADECMVLDNEALYDICFR 214
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 130 bits (314), Expect = 1e-30
Identities = 68/215 (31%), Positives = 100/215 (46%)
Frame = +2
Query: 155 MRXCISVHVGXAGVQXGNACWELYCLEHGIQPDGXMPTDKTXXXXXXSFNTFFSETGAGK 334
MR + + G G Q G WE+ C EHGI P G D N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLER--INVYYNEASCGR 58
Query: 335 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEXAAXNYARGXYTIGKEIVDLVLD 514
VPRAV +DLEP +D +R+G Y Q F P+ + G+ A N+A+G YT G E++D VLD
Sbjct: 59 FVPRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 515 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGXKSKXEFXIYXXXXXXXX 694
+RK A+ C LQGF + H LL+ ++ +Y + F ++
Sbjct: 119 VVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDT 178
Query: 695 XXXXYXSIXXXXXXXXXSDCAFXVXNESXXDIXRR 799
Y + +D + NE+ DI R
Sbjct: 179 VVEPYNATLSVHQLVENADECMVLDNEALYDICFR 213
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 130 bits (314), Expect = 1e-30
Identities = 68/215 (31%), Positives = 100/215 (46%)
Frame = +2
Query: 155 MRXCISVHVGXAGVQXGNACWELYCLEHGIQPDGXMPTDKTXXXXXXSFNTFFSETGAGK 334
MR + + G G Q G WE+ C EHGI P G D N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLER--INVYYNEASCGR 58
Query: 335 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEXAAXNYARGXYTIGKEIVDLVLD 514
VPRAV +DLEP +D +R+G Y Q F P+ + G+ A N+A+G YT G E++D VLD
Sbjct: 59 FVPRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 515 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGXKSKXEFXIYXXXXXXXX 694
+RK A+ C LQGF + H LL+ ++ +Y + F ++
Sbjct: 119 VVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDT 178
Query: 695 XXXXYXSIXXXXXXXXXSDCAFXVXNESXXDIXRR 799
Y + +D + NE+ DI R
Sbjct: 179 VVEPYNATLSVHQLVENADECMVLDNEALYDICFR 213
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 128 bits (309), Expect = 5e-30
Identities = 68/215 (31%), Positives = 102/215 (47%)
Frame = +2
Query: 155 MRXCISVHVGXAGVQXGNACWELYCLEHGIQPDGXMPTDKTXXXXXXSFNTFFSETGAGK 334
MR + + G G Q G+ WE+ LEHGI G D N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVNLEHGIDQTGRYVGDSELQLERV--NVYYNEASCGR 58
Query: 335 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEXAAXNYARGXYTIGKEIVDLVLD 514
+VPRAV +DLEP +D VR+G Y Q+F P+ + G+ A N+A+G YT G E++D VLD
Sbjct: 59 YVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 515 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGXKSKXEFXIYXXXXXXXX 694
+RK A+ C LQGF + H LL+ ++ +Y + F ++
Sbjct: 119 VVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPSPKVSDT 178
Query: 695 XXXXYXSIXXXXXXXXXSDCAFXVXNESXXDIXRR 799
Y + +D + NE+ DI R
Sbjct: 179 VVEPYNATLSVHQLVENADECMVLDNEALYDICFR 213
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 128 bits (308), Expect = 7e-30
Identities = 68/215 (31%), Positives = 101/215 (46%)
Frame = +2
Query: 155 MRXCISVHVGXAGVQXGNACWELYCLEHGIQPDGXMPTDKTXXXXXXSFNTFFSETGAGK 334
MR + + G G Q G WE+ C EHGI G D N +F+E GK
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGIDQTGQSCGDTDLQLER--INVYFNEASGGK 58
Query: 335 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEXAAXNYARGXYTIGKEIVDLVLD 514
+VPRAV +DLEP +D +R+G + Q+F P+ + G+ A N+A+G YT G E++D VLD
Sbjct: 59 YVPRAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 515 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGXKSKXEFXIYXXXXXXXX 694
+RK A+ C LQGF + H LL+ ++ +Y + F ++
Sbjct: 119 VVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPSPKVSDT 178
Query: 695 XXXXYXSIXXXXXXXXXSDCAFXVXNESXXDIXRR 799
Y + +D + NE+ DI R
Sbjct: 179 VVEPYNATLSVHQLVENADECMVLDNEALYDICFR 213
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 127 bits (307), Expect = 9e-30
Identities = 67/215 (31%), Positives = 100/215 (46%)
Frame = +2
Query: 155 MRXCISVHVGXAGVQXGNACWELYCLEHGIQPDGXMPTDKTXXXXXXSFNTFFSETGAGK 334
MR + + G G Q G WE+ C EHGI G + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYQGENDLQLERV--NVYYNEASCGR 58
Query: 335 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEXAAXNYARGXYTIGKEIVDLVLD 514
VPRAV +DLEP +D VR+G Y Q+F P+ + G+ A N+A+G YT G E++D VLD
Sbjct: 59 FVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 515 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGXKSKXEFXIYXXXXXXXX 694
+RK A+ C LQGF + H LL+ ++ +Y + F ++
Sbjct: 119 VVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDT 178
Query: 695 XXXXYXSIXXXXXXXXXSDCAFXVXNESXXDIXRR 799
Y + +D + NE+ DI R
Sbjct: 179 VVEPYNATLSVHQLVENADECMVLDNEALYDICFR 213
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 122 bits (294), Expect = 3e-28
Identities = 66/215 (30%), Positives = 100/215 (46%)
Frame = +2
Query: 155 MRXCISVHVGXAGVQXGNACWELYCLEHGIQPDGXMPTDKTXXXXXXSFNTFFSETGAGK 334
MR + + G G Q G WE+ C EHGI G D + +F+E GK
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGQYVGDSPLQLER--IDVYFNEASGGK 58
Query: 335 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEXAAXNYARGXYTIGKEIVDLVLD 514
+VPRAV +DLEP +D +R+G + Q+F P+ + G+ A N+A+G YT G E++D VLD
Sbjct: 59 YVPRAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 515 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGXKSKXEFXIYXXXXXXXX 694
+RK A+ LQGF + H LL+ ++ +Y + F ++
Sbjct: 119 VVRKEAENSDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPSPKVSDT 178
Query: 695 XXXXYXSIXXXXXXXXXSDCAFXVXNESXXDIXRR 799
Y + +D + NE+ DI R
Sbjct: 179 VVEPYNATLSVHQLVENADECMVLDNEALYDICFR 213
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 90.6 bits (215), Expect = 1e-18
Identities = 52/173 (30%), Positives = 83/173 (47%), Gaps = 2/173 (1%)
Frame = +2
Query: 158 RXCISVHVGXAGVQXGNACWELYCLEHGIQPDGXMPTDKTXXXXXXSFNTFFSETGAGKH 337
R I++ VG G Q G W+ CLEHGI DG + T + FF + +
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGGDRK--DVFFYQADDQHY 60
Query: 338 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKE--XAAXNYARGXYTIGKEIVDLVL 511
+PRA+ +DLEP V++ ++ G YR L++ E + A N+A G Y GK + + ++
Sbjct: 61 IPRALLIDLEPRVINGIQNGDYRNLYNHENIFVADHGGGAGNNWASG-YHQGKGVEEEIM 119
Query: 512 DRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGXKSKXEFXIY 670
D I + AD L+GF++ H L+E L+ Y K + ++
Sbjct: 120 DMIDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTYSVF 172
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 90.2 bits (214), Expect = 2e-18
Identities = 52/173 (30%), Positives = 83/173 (47%), Gaps = 2/173 (1%)
Frame = +2
Query: 158 RXCISVHVGXAGVQXGNACWELYCLEHGIQPDGXMPTDKTXXXXXXSFNTFFSETGAGKH 337
R I++ VG G Q G W+ CLEHGI DG + T + FF + +
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGGDRK--DVFFYQADDQHY 60
Query: 338 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKE--XAAXNYARGXYTIGKEIVDLVL 511
+PRA+ +DLEP V++ ++ G YR L++ E + A N+A G Y GK + + ++
Sbjct: 61 IPRALLIDLEPRVINGIQNGEYRNLYNHENIFLSDHGGGAGNNWASG-YHQGKGVEEEIM 119
Query: 512 DRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGXKSKXEFXIY 670
D I + AD L+GF++ H L+E L+ Y K + ++
Sbjct: 120 DMIDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTYSVF 172
>At1g24460.1 68414.m03081 myosin-related contains TIGRFAM TIGR01612:
reticulocyte binding protein; similar to Myosin heavy
chain, non-muscle (Zipper protein) (Myosin II)
(SP:Q99323) {Drosophila melanogaster} similar to EST
gb|T76116
Length = 1730
Score = 29.5 bits (63), Expect = 3.2
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = -3
Query: 592 AGTSTEGVEDQESLQTGTLVSELADSVQNQIYD 494
+G TEGVED S LV D ++ QI D
Sbjct: 609 SGLMTEGVEDHTSSDINLLVDRSFDKIEKQIRD 641
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,172,904
Number of Sequences: 28952
Number of extensions: 221549
Number of successful extensions: 501
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 484
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 490
length of database: 12,070,560
effective HSP length: 81
effective length of database: 9,725,448
effective search space used: 2120147664
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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