Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP02_F_P06
(941 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 37 0.004
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 36 0.011
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 35 0.014
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 35 0.014
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 34 0.025
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 29 1.3
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 28 1.7
SPCC830.07c |psi1|psi|DNAJ domain protein Psi1|Schizosaccharomyc... 27 2.9
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 27 3.8
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 26 6.7
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 26 8.8
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 37.1 bits (82), Expect = 0.004
Identities = 22/56 (39%), Positives = 22/56 (39%), Gaps = 1/56 (1%)
Frame = +3
Query: 615 PPXXRPXXXPXXXXPAPXGAPXG-PXPPXAPXPXPPPPXXGPXGGXXQPAXGAXPP 779
PP P P P GAP P PP AP PP P P PA A PP
Sbjct: 424 PPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPI-APPLPAGMPAAPPLPPAAPAPPP 478
Score = 30.7 bits (66), Expect = 0.31
Identities = 20/60 (33%), Positives = 20/60 (33%)
Frame = +3
Query: 615 PPXXRPXXXPXXXXPAPXGAPXGPXPPXAPXPXPPPPXXGPXGGXXQPAXGAXPPXXXLP 794
PP P P AP P G P AP P PP P PA PP P
Sbjct: 420 PPSLPPSAPPSLPPSAPPSLPMGA--PAAP-PLPPSAPIAPPLPAGMPAAPPLPPAAPAP 476
Score = 30.7 bits (66), Expect = 0.31
Identities = 18/45 (40%), Positives = 18/45 (40%), Gaps = 1/45 (2%)
Frame = +3
Query: 606 GGPPPXXRPXXXPXXXXPAPXGAPXG-PXPPXAPXPXPPPPXXGP 737
G P P P P P G P P PP AP P PP P P
Sbjct: 442 GAPAAPPLPPSAPIAP-PLPAGMPAAPPLPPAAPAP-PPAPAPAP 484
Score = 30.3 bits (65), Expect = 0.41
Identities = 27/106 (25%), Positives = 29/106 (27%), Gaps = 2/106 (1%)
Frame = +3
Query: 612 PPPXXRPXXXPXXXXPAPXGAPXGPXPPXAPXPXPPPPXXGPXGGXXQPAXG--AXPPXX 785
PPP P P G+ PP PPPP G P G A PP
Sbjct: 311 PPPPPPPSRRNRGKPPIGNGSSNSSLPP-----PPPPPRSNAAGSIPLPPQGRSAPPPPP 365
Query: 786 XLPGXXXPRXPXXXXGXXXXXXPXXXXXXXXGXXSPXXXPPXGXXS 923
R P P G +P PP G S
Sbjct: 366 PRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAP-ALPPLGNAS 410
Score = 29.9 bits (64), Expect = 0.54
Identities = 14/38 (36%), Positives = 14/38 (36%)
Frame = +3
Query: 612 PPPXXRPXXXPXXXXPAPXGAPXGPXPPXAPXPXPPPP 725
PP P AP P P PP AP P P P
Sbjct: 450 PPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPAPAAP 487
Score = 28.7 bits (61), Expect = 1.3
Identities = 28/97 (28%), Positives = 30/97 (30%), Gaps = 8/97 (8%)
Frame = +3
Query: 552 PPRVRXXRGGXXXGHXXXGGPPPXXRPXXXPXXXXPAPXGAPXGPXPPXAPX-PXPPPPX 728
PP R RG G+ P P P A P PP P PPPP
Sbjct: 315 PPPSRRNRGKPPIGNGSSNSSLP-------PPPPPPRSNAAGSIPLPPQGRSAPPPPPPR 367
Query: 729 XGPXGGXXQP------AXGAXP-PXXXLPGXXXPRXP 818
P G P A P P +PG P P
Sbjct: 368 SAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALP 404
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 35.5 bits (78), Expect = 0.011
Identities = 19/62 (30%), Positives = 21/62 (33%), Gaps = 2/62 (3%)
Frame = +3
Query: 618 PXXRPXXXPXXXXPAPXGAPXGPXPPXA--PXPXPPPPXXGPXGGXXQPAXGAXPPXXXL 791
P P P P AP P PP + P P PP GP P + P
Sbjct: 1686 PVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVPN 1745
Query: 792 PG 797
PG
Sbjct: 1746 PG 1747
Score = 32.3 bits (70), Expect = 0.10
Identities = 15/48 (31%), Positives = 15/48 (31%)
Frame = +3
Query: 612 PPPXXRPXXXPXXXXPAPXGAPXGPXPPXAPXPXPPPPXXGPXGGXXQ 755
PPP P P P G P P PP P P G Q
Sbjct: 1707 PPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVPNPGDRSALLQ 1754
Score = 31.5 bits (68), Expect = 0.18
Identities = 21/71 (29%), Positives = 21/71 (29%)
Frame = +3
Query: 606 GGPPPXXRPXXXPXXXXPAPXGAPXGPXPPXAPXPXPPPPXXGPXGGXXQPAXGAXPPXX 785
GG P P A P PP P PPPP P PA P
Sbjct: 1679 GGMAPAHPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPP-----MPAGPPSAPPP 1733
Query: 786 XLPGXXXPRXP 818
LP P P
Sbjct: 1734 PLPASSAPSVP 1744
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 35.1 bits (77), Expect = 0.014
Identities = 21/56 (37%), Positives = 23/56 (41%)
Frame = +3
Query: 609 GPPPXXRPXXXPXXXXPAPXGAPXGPXPPXAPXPXPPPPXXGPXGGXXQPAXGAXP 776
G PP +P PAP GAP P P A P P P P +PA G P
Sbjct: 1138 GAPPVPKPSVAAPPV-PAPSGAPPVPKPSVAAPPVPAPSSGIPP--VPKPAAGVPP 1190
Score = 33.5 bits (73), Expect = 0.044
Identities = 23/82 (28%), Positives = 24/82 (29%)
Frame = +3
Query: 609 GPPPXXRPXXXPXXXXPAPXGAPXGPXPPXAPXPXPPPPXXGPXGGXXQPAXGAXPPXXX 788
G PP +P P P GAP P P A PP P G P P
Sbjct: 1119 GAPPVPKPSVAAPPV-PVPSGAPPVPKPSVA-----APPVPAPSGAPPVPKPSVAAPPVP 1172
Query: 789 LPGXXXPRXPXXXXGXXXXXXP 854
P P P G P
Sbjct: 1173 APSSGIPPVPKPAAGVPPVPPP 1194
Score = 33.1 bits (72), Expect = 0.058
Identities = 26/85 (30%), Positives = 27/85 (31%), Gaps = 5/85 (5%)
Frame = +3
Query: 615 PPXXRPXXXPXXXXPAPXGAPXGPXP----PXAPXPXPPPPXXGP-XGGXXQPAXGAXPP 779
PP +P PAP GAP P P P P P PP P PA PP
Sbjct: 1102 PPVPKPSVA-VPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPP 1160
Query: 780 XXXLPGXXXPRXPXXXXGXXXXXXP 854
P P P G P
Sbjct: 1161 VPK-PSVAAPPVPAPSSGIPPVPKP 1184
Score = 32.3 bits (70), Expect = 0.10
Identities = 18/56 (32%), Positives = 19/56 (33%), Gaps = 5/56 (8%)
Frame = +3
Query: 657 PAPXGAPXGPXPPXAPXPXPP-----PPXXGPXGGXXQPAXGAXPPXXXLPGXXXP 809
PAP G P P P A P P PP P G P P +P P
Sbjct: 1086 PAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPP 1141
Score = 31.1 bits (67), Expect = 0.24
Identities = 29/118 (24%), Positives = 31/118 (26%)
Frame = +3
Query: 459 GXPPXXXRXVXGLGXPXAAXXXXXPXGXXRXPPRVRXXRGGXXXGHXXXGGPPPXXRPXX 638
G PP V P + P PP V G G PP P
Sbjct: 1138 GAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPP-VPAPSSGIPPVPKPAAGVPPVPPPSE 1196
Query: 639 XPXXXXPAPXGAPXGPXPPXAPXPXPPPPXXGPXGGXXQPAXGAXPPXXXLPGXXXPR 812
P P+ G P P P AP P P A P P PR
Sbjct: 1197 APPVPKPS-VGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVPAPSSEAPSVSTPR 1253
Score = 30.7 bits (66), Expect = 0.31
Identities = 17/42 (40%), Positives = 17/42 (40%)
Frame = +3
Query: 612 PPPXXRPXXXPXXXXPAPXGAPXGPXPPXAPXPXPPPPXXGP 737
PPP P PAP GAP P P P P P P P
Sbjct: 1063 PPPVPAPSSE-IPSIPAPSGAPPVPAPSGIP-PVPKPSVAAP 1102
Score = 29.9 bits (64), Expect = 0.54
Identities = 21/70 (30%), Positives = 23/70 (32%)
Frame = +3
Query: 609 GPPPXXRPXXXPXXXXPAPXGAPXGPXPPXAPXPXPPPPXXGPXGGXXQPAXGAXPPXXX 788
G PP +P P P AP P P P PPP P P A P
Sbjct: 1177 GIPPVPKPAAG-VPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPV-----PTPSAGLPPVP 1230
Query: 789 LPGXXXPRXP 818
+P P P
Sbjct: 1231 VPTAKAPPVP 1240
Score = 28.7 bits (61), Expect = 1.3
Identities = 22/79 (27%), Positives = 22/79 (27%), Gaps = 11/79 (13%)
Frame = +3
Query: 615 PPXXRPXXXPXXXXPAPX---GAPXGPXP--------PXAPXPXPPPPXXGPXGGXXQPA 761
P P P P P GAP P P P P P PP P G P
Sbjct: 1037 PSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPK 1096
Query: 762 XGAXPPXXXLPGXXXPRXP 818
P P P P
Sbjct: 1097 PSVAAPPVPKPSVAVPPVP 1115
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 35.1 bits (77), Expect = 0.014
Identities = 20/52 (38%), Positives = 20/52 (38%), Gaps = 3/52 (5%)
Frame = +3
Query: 630 PXXXPXXXXPAPXGAPXGPXPPXAPX---PXPPPPXXGPXGGXXQPAXGAXP 776
P P P P AP P PP AP P PPPP G G P P
Sbjct: 733 PPPPPAVIVPTPAPAPI-PVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 33.9 bits (74), Expect = 0.033
Identities = 19/56 (33%), Positives = 19/56 (33%), Gaps = 1/56 (1%)
Frame = +3
Query: 612 PPPXXRPXXXPXXXXPAPXGAPXGPXPPXAPXPXPPPPXXGPXGG-XXQPAXGAXP 776
P P P P P P P G P P PPPP G PA A P
Sbjct: 746 PAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGGSRYYAPAPQAEP 801
Score = 30.7 bits (66), Expect = 0.31
Identities = 16/48 (33%), Positives = 16/48 (33%)
Frame = -1
Query: 500 PXPPDXPXXGRGXAPYXXXPXPRXPXEGXXGGKNXPPRPXXPGPXKGG 357
P P P AP P P P G G PP P P GG
Sbjct: 742 PTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGG 789
Score = 27.1 bits (57), Expect = 3.8
Identities = 16/47 (34%), Positives = 16/47 (34%), Gaps = 1/47 (2%)
Frame = +3
Query: 657 PAPXGAPXGPXPPXAPXPXPPPPXXGPXGGXXQP-AXGAXPPXXXLP 794
P P P P P P P P GP P GA PP P
Sbjct: 735 PPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPP 781
Score = 26.2 bits (55), Expect = 6.7
Identities = 16/48 (33%), Positives = 16/48 (33%), Gaps = 6/48 (12%)
Frame = +3
Query: 612 PPPXXRPXXXPXXXXPAPXGAPXGPXPPXAPXP------XPPPPXXGP 737
PPP P P AP PP P P PPPP P
Sbjct: 735 PPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 34.3 bits (75), Expect = 0.025
Identities = 24/71 (33%), Positives = 24/71 (33%), Gaps = 1/71 (1%)
Frame = -2
Query: 817 GXRGXXXPGRXXXGGXAPXAGCXXPPXGPXXGGGGXGXGAXGGXGPXGAPXGAGXXXXGX 638
G G PG GG G G GGG G G G G P G G G
Sbjct: 195 GGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGGF 254
Query: 637 XXG-RXXGGGP 608
G GGGP
Sbjct: 255 GGGPGGFGGGP 265
Score = 26.6 bits (56), Expect = 5.1
Identities = 19/64 (29%), Positives = 19/64 (29%)
Frame = -2
Query: 832 PXXXXGXRGXXXPGRXXXGGXAPXAGCXXPPXGPXXGGGGXGXGAXGGXGPXGAPXGAGX 653
P G G G G G GP GGG G G G G P G G
Sbjct: 204 PGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPGGFGG 263
Query: 652 XXXG 641
G
Sbjct: 264 GPGG 267
Score = 26.2 bits (55), Expect = 6.7
Identities = 13/36 (36%), Positives = 13/36 (36%)
Frame = -2
Query: 721 GGGXGXGAXGGXGPXGAPXGAGXXXXGXXXGRXXGG 614
GGG G G GP P G G G GG
Sbjct: 187 GGGFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGG 222
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 28.7 bits (61), Expect = 1.3
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +3
Query: 657 PAPXGAPXGPXPPXAPXPXPPP 722
P P P G PP P P PPP
Sbjct: 9 PPPPPPPPGFEPPSQPPPPPPP 30
Score = 26.2 bits (55), Expect = 6.7
Identities = 10/23 (43%), Positives = 10/23 (43%)
Frame = +3
Query: 690 PPXAPXPXPPPPXXGPXGGXXQP 758
PP P P PPPP P P
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPP 27
Score = 25.8 bits (54), Expect = 8.8
Identities = 12/27 (44%), Positives = 12/27 (44%), Gaps = 3/27 (11%)
Frame = +3
Query: 663 PXGAPXGPXPPXA---PXPXPPPPXXG 734
P G P P PP P PPPP G
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPPPG 31
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 28.3 bits (60), Expect = 1.7
Identities = 20/80 (25%), Positives = 26/80 (32%), Gaps = 6/80 (7%)
Frame = -2
Query: 514 AAXGXPSPXTXLXXXGGXPPXPXXPXPAX------PXKXXXXGKTXPPGPXXXAPKRXAR 353
+A P+P + L PP P P P+ P K + PP AP +
Sbjct: 126 SAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPP 185
Query: 352 XXTXXXXAAPXRVLXXXPPP 293
A P PPP
Sbjct: 186 SAPSLPSAVPPMPPKVPPPP 205
Score = 27.9 bits (59), Expect = 2.2
Identities = 17/62 (27%), Positives = 18/62 (29%), Gaps = 2/62 (3%)
Frame = +3
Query: 615 PPXXRPXXXPXXXXPAPXGAPXGPX--PPXAPXPXPPPPXXGPXGGXXQPAXGAXPPXXX 788
P P P +P AP P PP P PPP P PP
Sbjct: 168 PSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPPPLSQAPVANTSSRPSSFAPPAGH 227
Query: 789 LP 794
P
Sbjct: 228 AP 229
Score = 27.5 bits (58), Expect = 2.9
Identities = 19/65 (29%), Positives = 20/65 (30%), Gaps = 3/65 (4%)
Frame = +3
Query: 591 GHXXXGGPPPXXRPXXXPXXXXPAPXGAPXGPX-PPXAPXPXPPPPXXGP--XGGXXQPA 761
G PP P P AP P PP +P PP P P PA
Sbjct: 116 GKSSASAAPPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPA 175
Query: 762 XGAXP 776
A P
Sbjct: 176 QPAAP 180
Score = 27.1 bits (57), Expect = 3.8
Identities = 19/57 (33%), Positives = 20/57 (35%), Gaps = 1/57 (1%)
Frame = +3
Query: 612 PPPXXRPXXXPXXXXPAPXGAPXGPXPPXAPXP-XPPPPXXGPXGGXXQPAXGAXPP 779
PP P P P P AP P P P P P P P P+ A PP
Sbjct: 144 PPRPSIPPPSPASAPPIPSKAP--PIPSSLPPPAQPAAPVKSPPSAPSLPS--AVPP 196
>SPCC830.07c |psi1|psi|DNAJ domain protein Psi1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 379
Score = 27.5 bits (58), Expect = 2.9
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = -2
Query: 757 GCXXPPXGPXXGGGGXGXGAXGGXGPXGA 671
G PP GG G G G G GP GA
Sbjct: 72 GNAAPPPPGAEGGPGAGFGGFPGAGPGGA 100
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 27.1 bits (57), Expect = 3.8
Identities = 16/61 (26%), Positives = 18/61 (29%)
Frame = +3
Query: 612 PPPXXRPXXXPXXXXPAPXGAPXGPXPPXAPXPXPPPPXXGPXGGXXQPAXGAXPPXXXL 791
P P P P P AP P P P P P +PA P +
Sbjct: 575 PQPPVAPVAPEVPSVPQPPVAPVVPEAPSVPQPPVAPVAPEVPSVPQRPAVPVVPEAPSV 634
Query: 792 P 794
P
Sbjct: 635 P 635
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 26.2 bits (55), Expect = 6.7
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +3
Query: 681 GPXPPXAPXPXPPPPXXGPXGG 746
G P P P PPPP GG
Sbjct: 939 GVMPAFPPPPPPPPPLVSAAGG 960
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 25.8 bits (54), Expect = 8.8
Identities = 10/25 (40%), Positives = 10/25 (40%)
Frame = -3
Query: 399 PPPPAPXXXPXKGXPGXXRXXXXPP 325
PPPP P P G P PP
Sbjct: 1882 PPPPPPMALPKAGPPSAAPTSALPP 1906
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.315 0.156 0.554
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,755,668
Number of Sequences: 5004
Number of extensions: 25570
Number of successful extensions: 194
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 123
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 479324640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
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