Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP02_F_P05
(1295 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_37008| Best HMM Match : MAM (HMM E-Value=1.3999e-42) 39 0.010
SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1) 39 0.010
SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33) 35 0.12
SB_2292| Best HMM Match : Extensin_2 (HMM E-Value=0.033) 34 0.29
SB_20734| Best HMM Match : Abi_HHR (HMM E-Value=3.59994e-42) 33 0.50
SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.66
SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 1.8
SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 2.7
SB_32428| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.5
SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.5
SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 4.6
SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05) 29 8.1
SB_22404| Best HMM Match : SNF2_N (HMM E-Value=0) 29 8.1
SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013) 29 8.1
SB_56161| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 8.1
SB_50337| Best HMM Match : Extensin_1 (HMM E-Value=0.19) 29 8.1
SB_15062| Best HMM Match : Tctex-1 (HMM E-Value=9.8e-19) 29 8.1
>SB_37008| Best HMM Match : MAM (HMM E-Value=1.3999e-42)
Length = 382
Score = 38.7 bits (86), Expect = 0.010
Identities = 30/107 (28%), Positives = 36/107 (33%), Gaps = 2/107 (1%)
Frame = +1
Query: 787 HIPPSPXXXXHXPXAPQX--QAXXXXXTXLXXLPLTPCXAXSFXPPXXPPXVXXXAXPHL 960
HIPP+P H P AP +A + PL P F PP P A P+
Sbjct: 219 HIPPAPLHP-HIPPAPPNPSKAIATPNPPMPETPLPPATPNPFIPPASPNPSIPPAPPNP 277
Query: 961 TRNHXLPPXPXLX*PXPXXSPNPAXLXXXXVXXLXHXPRSXPXXPXP 1101
+ P L P P P P L H P + P P
Sbjct: 278 SIPAPPNPSIPLAPPNPYIPPAPPNLFIPSAPPNPHIPPAPPNPYIP 324
Score = 33.5 bits (73), Expect = 0.38
Identities = 27/100 (27%), Positives = 32/100 (32%), Gaps = 2/100 (2%)
Frame = +3
Query: 927 PSRXXXXXPXPHSXPQXPPXSXAXITXPXPLTESCXPQXXXXXXPXSPAPXXPXXPPPXX 1106
P+ P P P PP P P S P +P P P P P
Sbjct: 204 PTPPMPETPLPPGSPHIPPAPLHPHIPPAPPNPSKAIATPNPPMPETPLP--PATPNPFI 261
Query: 1107 XXXXLSSLXPPATTXXSLSRPVAXSRGLXPXS--XPPXPP 1220
+ PPA S+ P S L P + PP PP
Sbjct: 262 PPASPNPSIPPAPPNPSIPAPPNPSIPLAPPNPYIPPAPP 301
>SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1)
Length = 305
Score = 38.7 bits (86), Expect = 0.010
Identities = 30/114 (26%), Positives = 40/114 (35%), Gaps = 3/114 (2%)
Frame = +3
Query: 924 TPSRXXXXXPXPHSXPQXPPXSXAXITXPXPLTESCXPQXXXXXXPXSPAPXXPXXPPPX 1103
TP P P P+ P + P P T S + P +PA P PPP
Sbjct: 99 TPMVAQSVAPTPPPPPRAPETPSQAPSPPPPPT-SPATRAPPPPPPIAPATGGPPPPPPI 157
Query: 1104 XXXXXLSSLXPP---ATTXXSLSRPVAXSRGLXPXSXPPXPPXTXPVXXSGPLV 1256
PP A T + + P+A + P PP PP P P++
Sbjct: 158 APATGGPPPPPPIAPAATVPAPAVPLAAASPPPPSGGPPPPPPPPPPPPPPPIL 211
Score = 34.3 bits (75), Expect = 0.22
Identities = 25/100 (25%), Positives = 33/100 (33%)
Frame = +3
Query: 951 PXPHSXPQXPPXSXAXITXPXPLTESCXPQXXXXXXPXSPAPXXPXXPPPXXXXXXLSSL 1130
P P PP S A P P + P +PA P PPP +++
Sbjct: 120 PSQAPSPPPPPTSPATRAPPPPPPIAPATGGPPPPPPIAPATGGPPPPPPIAPA---ATV 176
Query: 1131 XPPATTXXSLSRPVAXSRGLXPXSXPPXPPXTXPVXXSGP 1250
PA + S P P PP PP + + P
Sbjct: 177 PAPAVPLAAASPPPPSGGPPPPPPPPPPPPPPPILELAAP 216
>SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33)
Length = 457
Score = 35.1 bits (77), Expect = 0.12
Identities = 22/78 (28%), Positives = 24/78 (30%)
Frame = +3
Query: 951 PXPHSXPQXPPXSXAXITXPXPLTESCXPQXXXXXXPXSPAPXXPXXPPPXXXXXXLSSL 1130
P P P PP S P P + PQ P P P P PPP
Sbjct: 365 PPPPPPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPP 424
Query: 1131 XPPATTXXSLSRPVAXSR 1184
PP +L A R
Sbjct: 425 PPPPPPPPALRLACAPPR 442
Score = 31.9 bits (69), Expect = 1.2
Identities = 18/65 (27%), Positives = 19/65 (29%)
Frame = +3
Query: 906 LRXSXXTPSRXXXXXPXPHSXPQXPPXSXAXITXPXPLTESCXPQXXXXXXPXSPAPXXP 1085
+ S P P P P PP S P P P P P P P
Sbjct: 361 INMSPPPPPPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAP 420
Query: 1086 XXPPP 1100
PPP
Sbjct: 421 PPPPP 425
>SB_2292| Best HMM Match : Extensin_2 (HMM E-Value=0.033)
Length = 867
Score = 33.9 bits (74), Expect = 0.29
Identities = 17/52 (32%), Positives = 21/52 (40%)
Frame = +3
Query: 981 PXSXAXITXPXPLTESCXPQXXXXXXPXSPAPXXPXXPPPXXXXXXLSSLXP 1136
P S + IT P P P P SP+P P PPP L++ P
Sbjct: 195 PTSPSQITQPPPPPPRPPPSPPPPPPPPSPSPPRPPPPPPPSPPRPLAAKLP 246
Score = 31.5 bits (68), Expect = 1.5
Identities = 19/58 (32%), Positives = 22/58 (37%)
Frame = +3
Query: 1059 PXSPAPXXPXXPPPXXXXXXLSSLXPPATTXXSLSRPVAXSRGLXPXSXPPXPPXTXP 1232
P P P P PPP S PP S RP+A ++ P P PP P
Sbjct: 204 PPPPPPRPPPSPPPPPPPPSPSPPRPPPPPPPSPPRPLA-AKLPEPPPIPNMPPTLPP 260
>SB_20734| Best HMM Match : Abi_HHR (HMM E-Value=3.59994e-42)
Length = 426
Score = 33.1 bits (72), Expect = 0.50
Identities = 25/90 (27%), Positives = 30/90 (33%), Gaps = 2/90 (2%)
Frame = +3
Query: 957 PHSXPQXPPXSXAXITXPXPLTESCXPQXXXXXXPXSPAPXXPXXPPPXXXXXXLSSLXP 1136
P + P PP S + ES P +P P PPP +S P
Sbjct: 252 PPTIPSVPPGSETYVPPGSATYESMDSVNKAPVPPMTPPPAVVTAPPPAPPLPNFTSPSP 311
Query: 1137 PATTXXSLSRPVAXSRGLXP--XSXPPXPP 1220
P + P A L P S PP PP
Sbjct: 312 PPPPPLPPAMP-AMDDLLPPEVLSPPPPPP 340
>SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 290
Score = 32.7 bits (71), Expect = 0.66
Identities = 24/94 (25%), Positives = 28/94 (29%)
Frame = +3
Query: 951 PXPHSXPQXPPXSXAXITXPXPLTESCXPQXXXXXXPXSPAPXXPXXPPPXXXXXXLSSL 1130
P P + P PP P P P P P P P PPP ++
Sbjct: 149 PPPPNPPYPPPLYPPPPNPPPPNAPYPPPPYPPPPNPPYPPPPNPPYPPPP------NAP 202
Query: 1131 XPPATTXXSLSRPVAXSRGLXPXSXPPXPPXTXP 1232
PP P A + P P PP P
Sbjct: 203 NPPPPNPPYPPPPNAPNPPYPPPPNAPNPPYPPP 236
Score = 31.5 bits (68), Expect = 1.5
Identities = 25/94 (26%), Positives = 29/94 (30%)
Frame = +3
Query: 951 PXPHSXPQXPPXSXAXITXPXPLTESCXPQXXXXXXPXSPAPXXPXXPPPXXXXXXLSSL 1130
P P+ P PP P P + P P P+P P PPP L
Sbjct: 105 PPPYPPPPNPPYPPPP-NAPYPPPPN-PPYPPPPNAPYPPSPNAPYPPPPNPPYP--PPL 160
Query: 1131 XPPATTXXSLSRPVAXSRGLXPXSXPPXPPXTXP 1232
PP + P P PP PP P
Sbjct: 161 YPPPPNPPPPNAPYPPP-PYPPPPNPPYPPPPNP 193
Score = 31.5 bits (68), Expect = 1.5
Identities = 22/90 (24%), Positives = 27/90 (30%)
Frame = +3
Query: 951 PXPHSXPQXPPXSXAXITXPXPLTESCXPQXXXXXXPXSPAPXXPXXPPPXXXXXXLSSL 1130
P P + P PP + P P P P +P P P P P +
Sbjct: 109 PPPPNPPYPPPPNAPYPPPPNPPYPP-PPNAPYPPSPNAPYPPPPNPPYPPPLYPPPPNP 167
Query: 1131 XPPATTXXSLSRPVAXSRGLXPXSXPPXPP 1220
PP P + P PP PP
Sbjct: 168 PPPNAPYPPPPYPPPPNPPYPPPPNPPYPP 197
>SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1597
Score = 26.2 bits (55), Expect(2) = 1.8
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = +3
Query: 1194 PXSXPPXPPXTXPVXXSG 1247
P + PP PP T PV SG
Sbjct: 703 PSTPPPPPPSTPPVQQSG 720
Score = 23.4 bits (48), Expect(2) = 1.8
Identities = 10/27 (37%), Positives = 11/27 (40%)
Frame = +3
Query: 1059 PXSPAPXXPXXPPPXXXXXXLSSLXPP 1139
P P P P PPP S+ PP
Sbjct: 683 PPPPPPPPPPPPPPPPPPPQPSTPPPP 709
>SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2870
Score = 30.7 bits (66), Expect = 2.7
Identities = 20/73 (27%), Positives = 21/73 (28%)
Frame = +1
Query: 793 PPSPXXXXHXPXAPQXQAXXXXXTXLXXLPLTPCXAXSFXPPXXPPXVXXXAXPHLTRNH 972
PP P P P T +P TP S P PP P
Sbjct: 908 PPPPLPLAPEPPPPLPPPPPPIQTTRPTVPTTPTTQASTTRPTPPPPTSALPPPIPATQV 967
Query: 973 XLPPXPXLX*PXP 1011
PP P L P P
Sbjct: 968 PPPPLPPLPPPPP 980
Score = 29.9 bits (64), Expect = 4.6
Identities = 24/89 (26%), Positives = 31/89 (34%), Gaps = 11/89 (12%)
Frame = +3
Query: 1002 TXPXPLTESCXPQXXXXXXPXSPAPXXPXXPPPXXXXXXLSSLXPPATTXXSLSRPV--- 1172
T P P T + P P +P P P PPP ++ TT S +RP
Sbjct: 899 TTPKPTTPAPPPPL-----PLAPEPPPPLPPPPPPIQTTRPTVPTTPTTQASTTRPTPPP 953
Query: 1173 --------AXSRGLXPXSXPPXPPXTXPV 1235
+ + P PP PP PV
Sbjct: 954 PTSALPPPIPATQVPPPPLPPLPPPPPPV 982
>SB_32428| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1128
Score = 30.3 bits (65), Expect = 3.5
Identities = 18/71 (25%), Positives = 24/71 (33%)
Frame = +3
Query: 1020 TESCXPQXXXXXXPXSPAPXXPXXPPPXXXXXXLSSLXPPATTXXSLSRPVAXSRGLXPX 1199
T++C + P P PPP ++ PP TT S P + L P
Sbjct: 89 TDNCNAKPAQPDTDVPPPPATTSAPPPPTTTAPPATTSPPTTTD---SPPTTAAETLPPT 145
Query: 1200 SXPPXPPXTXP 1232
P P P
Sbjct: 146 DAPTEAPTEPP 156
>SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 30.3 bits (65), Expect = 3.5
Identities = 15/50 (30%), Positives = 16/50 (32%)
Frame = +3
Query: 951 PXPHSXPQXPPXSXAXITXPXPLTESCXPQXXXXXXPXSPAPXXPXXPPP 1100
P P + P PP P P T P P P P PPP
Sbjct: 348 PPPTNNPPSPPPPTNNTPPPPPPTNKPPPPPPPTNGPPPPPPPTNGPPPP 397
>SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1000
Score = 29.9 bits (64), Expect = 4.6
Identities = 25/90 (27%), Positives = 25/90 (27%)
Frame = +3
Query: 951 PXPHSXPQXPPXSXAXITXPXPLTESCXPQXXXXXXPXSPAPXXPXXPPPXXXXXXLSSL 1130
P S P PP P P P P P P PPP S
Sbjct: 914 PPGGSVPPPPPPPGGNAPLPPPPPGGSAPSQ-----PPPPGGNAPPPPPPPG-----GSA 963
Query: 1131 XPPATTXXSLSRPVAXSRGLXPXSXPPXPP 1220
PP L P S P PP PP
Sbjct: 964 PPPGGGAPPLPPPPGGSAPPPPPPPPPPPP 993
>SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05)
Length = 480
Score = 29.1 bits (62), Expect = 8.1
Identities = 28/110 (25%), Positives = 31/110 (28%), Gaps = 2/110 (1%)
Frame = +3
Query: 927 PSRXXXXXPXPHSXPQXPPXSXAXITXPXPLTESCXPQXXXXXXPXSPAPXXPXXPPPXX 1106
PS+ P P P P + T P P P PPP
Sbjct: 160 PSQGSFPPPPPMGKPPPPSGNKPTFGNSRTSTNGPPPPPHSRHGSAPPPPERSSGPPPPP 219
Query: 1107 XXXXLS--SLXPPATTXXSLSRPVAXSRGLXPXSXPPXPPXTXPVXXSGP 1250
S SL PP T SRP+ P P PP P P
Sbjct: 220 PGRGPSQRSLAPPPT---GSSRPLPAP---PPGENRPPPPMRGPTSGGEP 263
>SB_22404| Best HMM Match : SNF2_N (HMM E-Value=0)
Length = 1918
Score = 29.1 bits (62), Expect = 8.1
Identities = 12/35 (34%), Positives = 15/35 (42%)
Frame = +1
Query: 877 LPLTPCXAXSFXPPXXPPXVXXXAXPHLTRNHXLP 981
+P +P F PP P + PH T H LP
Sbjct: 45 VPTSPYKTSPFMPPQSPGSMQNPVSPHRTYQHNLP 79
>SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013)
Length = 392
Score = 29.1 bits (62), Expect = 8.1
Identities = 28/110 (25%), Positives = 31/110 (28%), Gaps = 2/110 (1%)
Frame = +3
Query: 927 PSRXXXXXPXPHSXPQXPPXSXAXITXPXPLTESCXPQXXXXXXPXSPAPXXPXXPPPXX 1106
PS+ P P P P + T P P P PPP
Sbjct: 72 PSQGSFPPPPPMGKPPPPSGNKPTFGNSRTSTNGPPPPPHSRHGSAPPPPERSSGPPPPP 131
Query: 1107 XXXXLS--SLXPPATTXXSLSRPVAXSRGLXPXSXPPXPPXTXPVXXSGP 1250
S SL PP T SRP+ P P PP P P
Sbjct: 132 PGRGPSQRSLAPPPT---GSSRPLPAP---PPGENRPPPPMRGPTSGGEP 175
>SB_56161| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 213
Score = 29.1 bits (62), Expect = 8.1
Identities = 21/75 (28%), Positives = 24/75 (32%), Gaps = 3/75 (4%)
Frame = +3
Query: 924 TPSRXXXXXPXPHSXPQXPPXSXAXITXPXPLTESCXPQXXXXXXPXSPAPXXPXXP--- 1094
TPS P PQ PP + + P P T P P P P P
Sbjct: 127 TPSFATTTINYPPPGPQAPPPG-STVHYPPPQTTMGYPSAQPGFAPPGNYPPPPAPPPAY 185
Query: 1095 PPXXXXXXLSSLXPP 1139
PP +S PP
Sbjct: 186 PPVTQGYNMSQYPPP 200
>SB_50337| Best HMM Match : Extensin_1 (HMM E-Value=0.19)
Length = 86
Score = 29.1 bits (62), Expect = 8.1
Identities = 18/58 (31%), Positives = 18/58 (31%), Gaps = 2/58 (3%)
Frame = +3
Query: 1059 PXSPAPXXPXXPPPXXXXXXLSS--LXPPATTXXSLSRPVAXSRGLXPXSXPPXPPXT 1226
P P P P PPP S PP T PV P P PP T
Sbjct: 22 PPQPTPPKPDTPPPGTNIPTPPSPNTPPPVTQPPVTQPPVTQPPVTQPPVTQPPPPVT 79
>SB_15062| Best HMM Match : Tctex-1 (HMM E-Value=9.8e-19)
Length = 851
Score = 29.1 bits (62), Expect = 8.1
Identities = 21/65 (32%), Positives = 25/65 (38%), Gaps = 2/65 (3%)
Frame = +3
Query: 1071 APXXPXXPPPXXXXXXLSS--LXPPATTXXSLSRPVAXSRGLXPXSXPPXPPXTXPVXXS 1244
+P P PP S+ + PP T SL P+A PP PP T P
Sbjct: 228 SPGTPPTPPTVRLRKKESASRIPPPLLTTMSLDTPLAE---------PPAPPPTTPTSAG 278
Query: 1245 GPLVS 1259
PL S
Sbjct: 279 APLSS 283
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,351,489
Number of Sequences: 59808
Number of extensions: 130732
Number of successful extensions: 526
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 207
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 359
length of database: 16,821,457
effective HSP length: 84
effective length of database: 11,797,585
effective search space used: 4093761995
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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