Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_P05
         (1295 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z29561-4|CAD91697.1|  498|Caenorhabditis elegans Hypothetical pr...    32   1.0  
Z83227-3|CAB05726.2|  241|Caenorhabditis elegans Hypothetical pr...    31   2.3  
U10438-9|AAU87834.1|  616|Caenorhabditis elegans Hypothetical pr...    30   3.1  
U40799-6|AAA81484.2|  210|Caenorhabditis elegans Ground-like (gr...    30   4.1  
AC024805-16|AAK39336.1|  448|Caenorhabditis elegans Hypothetical...    29   5.4  
U64845-3|AAC48032.2|  312|Caenorhabditis elegans Hypothetical pr...    29   7.2  
AF077534-1|AAK71375.1| 1136|Caenorhabditis elegans Temporarily a...    29   7.2  
Z74472-4|CAA98942.1|  301|Caenorhabditis elegans Hypothetical pr...    29   9.5  
U88172-5|AAB42260.1|  483|Caenorhabditis elegans Hypothetical pr...    29   9.5  
U41538-2|AAG00010.1|  997|Caenorhabditis elegans Hypothetical pr...    29   9.5  
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ...    29   9.5  

>Z29561-4|CAD91697.1|  498|Caenorhabditis elegans Hypothetical protein
            R10E12.1d protein.
          Length = 498

 Score = 31.9 bits (69), Expect = 1.0
 Identities = 17/61 (27%), Positives = 21/61 (34%)
 Frame = +3

Query: 978  PPXSXAXITXPXPLTESCXPQXXXXXXPXSPAPXXPXXPPPXXXXXXLSSLXPPATTXXS 1157
            P    A +  P P+     P         SPA   P  PPP      + S  PP  T  S
Sbjct: 336  PTLPKAVLAKPTPMQTPMTPSFRGTNAAQSPANAPPRPPPPRPAAPSVESPIPPPRTQQS 395

Query: 1158 L 1160
            +
Sbjct: 396  M 396


>Z83227-3|CAB05726.2|  241|Caenorhabditis elegans Hypothetical protein
            F45B8.3 protein.
          Length = 241

 Score = 30.7 bits (66), Expect = 2.3
 Identities = 17/51 (33%), Positives = 18/51 (35%), Gaps = 1/51 (1%)
 Frame = +3

Query: 951  PXPHSXPQXPPXSXAXITXPXPLTESCXPQXXXXXX-PXSPAPXXPXXPPP 1100
            P P   P  PP        P P +  C P        P  PAP  P  PPP
Sbjct: 76   PSPSCCPYVPPAPLPP--PPPPASPCCGPSPVPAPCCPPPPAPAAPCCPPP 124


>U10438-9|AAU87834.1|  616|Caenorhabditis elegans Hypothetical protein
            B0280.13 protein.
          Length = 616

 Score = 30.3 bits (65), Expect = 3.1
 Identities = 25/85 (29%), Positives = 27/85 (31%)
 Frame = +3

Query: 978  PPXSXAXITXPXPLTESCXPQXXXXXXPXSPAPXXPXXPPPXXXXXXLSSLXPPATTXXS 1157
            PP   A  T   P+  S  P       P +P P     PPP       S    PA    S
Sbjct: 442  PPPPSAPPTIKFPI--STGPSYSSTTPPTTPKPA----PPPPSRIPNPSPSPQPAEVSKS 495

Query: 1158 LSRPVAXSRGLXPXSXPPXPPXTXP 1232
               P        P S PP PP   P
Sbjct: 496  PPPPPPLPPIATPSSVPPPPPPPPP 520


>U40799-6|AAA81484.2|  210|Caenorhabditis elegans Ground-like (grd
            related) protein 4 protein.
          Length = 210

 Score = 29.9 bits (64), Expect = 4.1
 Identities = 17/51 (33%), Positives = 17/51 (33%), Gaps = 3/51 (5%)
 Frame = +3

Query: 957  PHSXPQXPPXSXAXITXPXPLTESCXPQ---XXXXXXPXSPAPXXPXXPPP 1100
            P   P  PP   A    P P    C PQ         P  P P  P  PPP
Sbjct: 27   PPPCPPPPPPMCAPPPLPCPPPPICPPQFCPPPPMCPPPPPPPPPPMCPPP 77


>AC024805-16|AAK39336.1|  448|Caenorhabditis elegans Hypothetical
            protein Y51H7C.1 protein.
          Length = 448

 Score = 29.5 bits (63), Expect = 5.4
 Identities = 20/100 (20%), Positives = 30/100 (30%)
 Frame = +3

Query: 951  PXPHSXPQXPPXSXAXITXPXPLTESCXPQXXXXXXPXSPAPXXPXXPPPXXXXXXLSSL 1130
            P  ++    PP S    T P  +  +  P         +         PP        + 
Sbjct: 181  PPYYTYRTVPPASNHYETVPPAVQTTPQPPCTPRTTTTTTTTTTTTTLPPCVYTPAPPAT 240

Query: 1131 XPPATTXXSLSRPVAXSRGLXPXSXPPXPPXTXPVXXSGP 1250
             PP T   +  RP+  ++   P      PP   P    GP
Sbjct: 241  QPPRTYPTTTPRPIPTTKTTVPQQWTTLPPGPEPTPGPGP 280


>U64845-3|AAC48032.2|  312|Caenorhabditis elegans Hypothetical protein
            F45F2.11 protein.
          Length = 312

 Score = 29.1 bits (62), Expect = 7.2
 Identities = 14/34 (41%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
 Frame = +1

Query: 913  PPXXPPXVXXXAXPHLTRN-HXLPPXPXLX*PXP 1011
            PP  PP       PH +R  H LPP P +  P P
Sbjct: 228  PPIPPPQFFFPPSPHFSREPHSLPPMPMML-PIP 260


>AF077534-1|AAK71375.1| 1136|Caenorhabditis elegans Temporarily
            assigned gene nameprotein 218, isoform a protein.
          Length = 1136

 Score = 29.1 bits (62), Expect = 7.2
 Identities = 17/54 (31%), Positives = 21/54 (38%)
 Frame = +3

Query: 1065 SPAPXXPXXPPPXXXXXXLSSLXPPATTXXSLSRPVAXSRGLXPXSXPPXPPXT 1226
            SP P  P  PP       + S   P     S+S  +  +R   P   PP PP T
Sbjct: 160  SPPPPLPSVPPSKERIKRIPSYLKPTPAPRSMSATLPRARLKTP---PPPPPVT 210


>Z74472-4|CAA98942.1|  301|Caenorhabditis elegans Hypothetical protein
            F23H12.4 protein.
          Length = 301

 Score = 28.7 bits (61), Expect = 9.5
 Identities = 23/100 (23%), Positives = 28/100 (28%), Gaps = 1/100 (1%)
 Frame = +3

Query: 924  TPSRXXXXXPXPHSXPQXPPXSXAXITXPXPLTESCXPQXXXXXXPXSPAPXXPXXPP-P 1100
            TP R           P+ PP        P P  E   P       P +P       PP P
Sbjct: 172  TPGRPGTDAAPGSPGPRGPPGPAGEAGAPGPAGEPGTPAISEPLTPGAPGEPGDSGPPGP 231

Query: 1101 XXXXXXLSSLXPPATTXXSLSRPVAXSRGLXPXSXPPXPP 1220
                    +  PP       +       G+   S PP PP
Sbjct: 232  PGPPGAPGNDGPPGPPGPKGAPGPDGPPGVDGQSGPPGPP 271


>U88172-5|AAB42260.1|  483|Caenorhabditis elegans Hypothetical protein
            ZK354.8 protein.
          Length = 483

 Score = 28.7 bits (61), Expect = 9.5
 Identities = 20/70 (28%), Positives = 24/70 (34%)
 Frame = +1

Query: 823  PXAPQXQAXXXXXTXLXXLPLTPCXAXSFXPPXXPPXVXXXAXPHLTRNHXLPPXPXLX* 1002
            P  PQ  A       +  + L P    S  PP  PP       P L  +   P  P +  
Sbjct: 71   PTLPQIIAKQEPEVAMKTMMLPP---PSDPPPPPPPVAPHQPPPQLATSAQPPQPPVINS 127

Query: 1003 PXPXXSPNPA 1032
              P  SP PA
Sbjct: 128  QLPRMSPAPA 137


>U41538-2|AAG00010.1|  997|Caenorhabditis elegans Hypothetical protein
            R04E5.8a protein.
          Length = 997

 Score = 28.7 bits (61), Expect = 9.5
 Identities = 17/50 (34%), Positives = 19/50 (38%)
 Frame = +3

Query: 951  PXPHSXPQXPPXSXAXITXPXPLTESCXPQXXXXXXPXSPAPXXPXXPPP 1100
            P P   P+ PP        P P+T    PQ      P SP P  P   PP
Sbjct: 141  PPPPRVPRTPPPRSPPPRRP-PMTPPS-PQRRPPRTPPSPEPRNPPRTPP 188


>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
            protein F59E12.9 protein.
          Length = 1621

 Score = 28.7 bits (61), Expect = 9.5
 Identities = 17/56 (30%), Positives = 23/56 (41%)
 Frame = +3

Query: 1065 SPAPXXPXXPPPXXXXXXLSSLXPPATTXXSLSRPVAXSRGLXPXSXPPXPPXTXP 1232
            SP+P  P  PPP      L+ + PP     ++S+         P   PP PP   P
Sbjct: 1335 SPSPPPP-PPPPPPPSDDLTPVPPPPPPPPTMSKAPTG----VPLPVPPPPPLFSP 1385


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,390,191
Number of Sequences: 27780
Number of extensions: 106010
Number of successful extensions: 365
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 219
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 331
length of database: 12,740,198
effective HSP length: 84
effective length of database: 10,406,678
effective search space used: 3611117266
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)