Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_P04
         (1105 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_01_0059 - 394001-394708                                             30   2.8  
02_05_0686 - 30900748-30902167,30903442-30904742                       30   3.8  
06_03_0905 + 25843547-25844314                                         29   5.0  
03_02_0155 - 5974118-5974173,5974242-5974314,5974393-5974500,597...    29   5.0  
08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,336...    29   6.6  
01_01_0070 - 542603-542686,542803-543441                               29   6.6  
11_01_0066 - 536281-537196,537397-537452                               29   8.7  
07_01_0674 + 5047503-5047646,5047808-5047901,5048743-5048828,504...    29   8.7  

>08_01_0059 - 394001-394708
          Length = 235

 Score = 30.3 bits (65), Expect = 2.8
 Identities = 14/42 (33%), Positives = 15/42 (35%)
 Frame = +1

Query: 796 PXXPXLPXXPAPXGPXSAXXPXAXLPXXXXSHPPXXPPXTPP 921
           P  P  P  P P  P     P A  P       P  PP +PP
Sbjct: 31  PIRPPPPPTPRPYAPPPPSHPLAPPPPHISPPAPVPPPPSPP 72


>02_05_0686 - 30900748-30902167,30903442-30904742
          Length = 906

 Score = 29.9 bits (64), Expect = 3.8
 Identities = 20/72 (27%), Positives = 22/72 (30%), Gaps = 1/72 (1%)
 Frame = +3

Query: 627 PLPRTXAXPXLSPXKTXPKXPXXXXXXPXPSTXXRPPLXXXPRHP-PXSXAGXXXRXSSX 803
           P P   A P   P K  P  P      P P     PP    P+ P P        +    
Sbjct: 319 PKPAAAAPPPPPPPKAAPPPPPPKGPPPPPPAKGPPP-PPPPKGPSPPPPPPPGGKKGGP 377

Query: 804 XXPPXXAXAXRP 839
             PP    A RP
Sbjct: 378 PPPPPKGGASRP 389


>06_03_0905 + 25843547-25844314
          Length = 255

 Score = 29.5 bits (63), Expect = 5.0
 Identities = 16/56 (28%), Positives = 19/56 (33%), Gaps = 1/56 (1%)
 Frame = +1

Query: 757 THPXXLXGXXXGXPXX-PXLPXXPAPXGPXSAXXPXAXLPXXXXSHPPXXPPXTPP 921
           +HP    G   G     P  P  P    P +   P    P    +HPP  P   PP
Sbjct: 44  SHPSPSPGHPKGPKNPTPRPPKGPTYPSPVTRPPPLVAPPKVPVTHPPKGPVTRPP 99


>03_02_0155 -
           5974118-5974173,5974242-5974314,5974393-5974500,
           5975189-5976914,5977065-5977620,5978008-5978485
          Length = 998

 Score = 29.5 bits (63), Expect = 5.0
 Identities = 13/39 (33%), Positives = 15/39 (38%)
 Frame = +1

Query: 805 PXLPXXPAPXGPXSAXXPXAXLPXXXXSHPPXXPPXTPP 921
           P  P  P    P +A  P +  P      PP  PP  PP
Sbjct: 70  PPPPPRPPSFAPENALPPSSPPPPSPPPPPPSSPPPVPP 108


>08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,
            33643-34147,34250-34358,34436-34548,34619-34806,
            35481-36129,36169-36691,36760-36911,37042-37141,
            37301-37416
          Length = 1530

 Score = 29.1 bits (62), Expect = 6.6
 Identities = 14/41 (34%), Positives = 14/41 (34%)
 Frame = +1

Query: 796  PXXPXLPXXPAPXGPXSAXXPXAXLPXXXXSHPPXXPPXTP 918
            P  P LP  P P    S   P    P      PP  PP  P
Sbjct: 1174 PLSPSLPPPPPPPPLPSGPPPQPAPPPLPIQPPPIPPPPVP 1214


>01_01_0070 - 542603-542686,542803-543441
          Length = 240

 Score = 29.1 bits (62), Expect = 6.6
 Identities = 15/49 (30%), Positives = 19/49 (38%), Gaps = 3/49 (6%)
 Frame = +3

Query: 627 PLPRTXAXPXLSPXKTXPKXPXXXXXXPXPSTXXR---PPLXXXPRHPP 764
           P P     P ++P K  P  P      P P T  +   PP+   P  PP
Sbjct: 55  PAPTATPTPPVAPAKAPPVAPAVAPVTPPPPTPKKAPPPPVTPPPVTPP 103


>11_01_0066 - 536281-537196,537397-537452
          Length = 323

 Score = 28.7 bits (61), Expect = 8.7
 Identities = 13/42 (30%), Positives = 15/42 (35%)
 Frame = +1

Query: 796 PXXPXLPXXPAPXGPXSAXXPXAXLPXXXXSHPPXXPPXTPP 921
           P  P +   P P  P S   P    P    + PP     TPP
Sbjct: 198 PTPPTIARPPRPLPPASPPPPSIATPPPSPASPPPPSTATPP 239


>07_01_0674 +
           5047503-5047646,5047808-5047901,5048743-5048828,
           5049380-5049429,5049517-5049586,5049668-5049749,
           5049867-5050267,5050414-5050941,5051823-5052044
          Length = 558

 Score = 28.7 bits (61), Expect = 8.7
 Identities = 14/42 (33%), Positives = 14/42 (33%)
 Frame = +1

Query: 796 PXXPXLPXXPAPXGPXSAXXPXAXLPXXXXSHPPXXPPXTPP 921
           P    LP  P P  P       A  P      PP  PP  PP
Sbjct: 221 PSAASLPPLPPPPPPPPKPANIAGAPGLPLPPPPPPPPGPPP 262


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,945,338
Number of Sequences: 37544
Number of extensions: 102531
Number of successful extensions: 684
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 360
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 619
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3316323664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)