Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP02_F_P04
(1105 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33) 32 0.72
SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.8
SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.0
>SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33)
Length = 457
Score = 32.3 bits (70), Expect = 0.72
Identities = 15/42 (35%), Positives = 15/42 (35%)
Frame = +1
Query: 796 PXXPXLPXXPAPXGPXSAXXPXAXLPXXXXSHPPXXPPXTPP 921
P P P P P P S P P PP PP PP
Sbjct: 372 PPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPP 413
Score = 31.1 bits (67), Expect = 1.7
Identities = 14/42 (33%), Positives = 15/42 (35%)
Frame = +1
Query: 796 PXXPXLPXXPAPXGPXSAXXPXAXLPXXXXSHPPXXPPXTPP 921
P P P P P P P P + PP PP PP
Sbjct: 389 PPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPPPPP 430
Score = 30.7 bits (66), Expect = 2.2
Identities = 14/42 (33%), Positives = 15/42 (35%)
Frame = +1
Query: 796 PXXPXLPXXPAPXGPXSAXXPXAXLPXXXXSHPPXXPPXTPP 921
P P P P+P P P P PP PP PP
Sbjct: 367 PPPPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPP 408
Score = 30.7 bits (66), Expect = 2.2
Identities = 14/42 (33%), Positives = 14/42 (33%)
Frame = +1
Query: 796 PXXPXLPXXPAPXGPXSAXXPXAXLPXXXXSHPPXXPPXTPP 921
P P P P P P P P PP PP PP
Sbjct: 375 PPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPP 416
Score = 30.3 bits (65), Expect = 2.9
Identities = 14/42 (33%), Positives = 14/42 (33%)
Frame = +1
Query: 796 PXXPXLPXXPAPXGPXSAXXPXAXLPXXXXSHPPXXPPXTPP 921
P P P P P P P P PP PP PP
Sbjct: 370 PPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPP 411
Score = 29.9 bits (64), Expect = 3.8
Identities = 14/42 (33%), Positives = 14/42 (33%)
Frame = +1
Query: 796 PXXPXLPXXPAPXGPXSAXXPXAXLPXXXXSHPPXXPPXTPP 921
P P P P P P P P PP PP PP
Sbjct: 365 PPPPPPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPP 406
Score = 29.9 bits (64), Expect = 3.8
Identities = 14/42 (33%), Positives = 14/42 (33%)
Frame = +1
Query: 796 PXXPXLPXXPAPXGPXSAXXPXAXLPXXXXSHPPXXPPXTPP 921
P P P P P P P P PP PP PP
Sbjct: 373 PPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPP 414
Score = 29.9 bits (64), Expect = 3.8
Identities = 14/42 (33%), Positives = 14/42 (33%)
Frame = +1
Query: 796 PXXPXLPXXPAPXGPXSAXXPXAXLPXXXXSHPPXXPPXTPP 921
P P P P P P P P PP PP PP
Sbjct: 376 PSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPP 417
Score = 29.9 bits (64), Expect = 3.8
Identities = 14/42 (33%), Positives = 14/42 (33%)
Frame = +1
Query: 796 PXXPXLPXXPAPXGPXSAXXPXAXLPXXXXSHPPXXPPXTPP 921
P P P P P P P P PP PP PP
Sbjct: 381 PPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPP 422
Score = 29.9 bits (64), Expect = 3.8
Identities = 14/42 (33%), Positives = 14/42 (33%)
Frame = +1
Query: 796 PXXPXLPXXPAPXGPXSAXXPXAXLPXXXXSHPPXXPPXTPP 921
P P P P P P P P PP PP PP
Sbjct: 384 PPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPP 425
Score = 29.9 bits (64), Expect = 3.8
Identities = 14/42 (33%), Positives = 14/42 (33%)
Frame = +1
Query: 796 PXXPXLPXXPAPXGPXSAXXPXAXLPXXXXSHPPXXPPXTPP 921
P P P P P P P P PP PP PP
Sbjct: 390 PPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPPPPPP 431
>SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 290
Score = 29.9 bits (64), Expect = 3.8
Identities = 13/39 (33%), Positives = 15/39 (38%)
Frame = +1
Query: 805 PXLPXXPAPXGPXSAXXPXAXLPXXXXSHPPXXPPXTPP 921
P P P P P + P P +PP PP PP
Sbjct: 125 PPPPNPPYPPPPNAPYPPSPNAPYPPPPNPPYPPPLYPP 163
Score = 29.1 bits (62), Expect = 6.7
Identities = 12/36 (33%), Positives = 13/36 (36%)
Frame = +1
Query: 814 PXXPAPXGPXSAXXPXAXLPXXXXSHPPXXPPXTPP 921
P P P P P P +PP PP PP
Sbjct: 159 PLYPPPPNPPPPNAPYPPPPYPPPPNPPYPPPPNPP 194
Score = 28.7 bits (61), Expect = 8.8
Identities = 13/42 (30%), Positives = 14/42 (33%)
Frame = +1
Query: 796 PXXPXLPXXPAPXGPXSAXXPXAXLPXXXXSHPPXXPPXTPP 921
P P P P P P P P +PP PP P
Sbjct: 98 PYPPYPPPPPYPPPPNPPYPPPPNAPYPPPPNPPYPPPPNAP 139
Score = 28.7 bits (61), Expect = 8.8
Identities = 13/42 (30%), Positives = 14/42 (33%)
Frame = +1
Query: 796 PXXPXLPXXPAPXGPXSAXXPXAXLPXXXXSHPPXXPPXTPP 921
P P P P P P P P + P PP PP
Sbjct: 114 PPYPPPPNAPYPPPPNPPYPPPPNAPYPPSPNAPYPPPPNPP 155
Score = 28.7 bits (61), Expect = 8.8
Identities = 13/42 (30%), Positives = 14/42 (33%)
Frame = +1
Query: 796 PXXPXLPXXPAPXGPXSAXXPXAXLPXXXXSHPPXXPPXTPP 921
P P P P P P P P +PP PP P
Sbjct: 177 PPYPPPPNPPYPPPPNPPYPPPPNAPNPPPPNPPYPPPPNAP 218
>SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1597
Score = 29.5 bits (63), Expect = 5.0
Identities = 14/39 (35%), Positives = 14/39 (35%)
Frame = +1
Query: 805 PXLPXXPAPXGPXSAXXPXAXLPXXXXSHPPXXPPXTPP 921
P P P P P P S PP PP TPP
Sbjct: 677 PIQTMVPPPPPPPPPPPPPPPPPPPQPSTPPPPPPSTPP 715
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,095,898
Number of Sequences: 59808
Number of extensions: 80735
Number of successful extensions: 370
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 127
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 297
length of database: 16,821,457
effective HSP length: 83
effective length of database: 11,857,393
effective search space used: 3367499612
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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