Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_P04
         (1105 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    25   3.0  
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    25   3.0  
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            24   7.0  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    24   7.0  

>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 25.4 bits (53), Expect = 3.0
 Identities = 15/44 (34%), Positives = 15/44 (34%)
 Frame = -3

Query: 920 GGVXGGXXGGWEXXXXGRXAXGXXAEXGPXGAGXXGRXGXXGXP 789
           GG  GG  G       GR   G     G  G G   R G  G P
Sbjct: 66  GGGRGGRGGRGGGRGRGRGRGGRDGGGGFGGGGYGDRNGDGGRP 109


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 25.4 bits (53), Expect = 3.0
 Identities = 15/39 (38%), Positives = 16/39 (41%)
 Frame = -3

Query: 920 GGVXGGXXGGWEXXXXGRXAXGXXAEXGPXGAGXXGRXG 804
           GG+ GG   G E    GR   G     G  G G  GR G
Sbjct: 535 GGMAGGGSDGPEYEGAGRGGVGSGI-GGGGGGGGGGRAG 572


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 24.2 bits (50), Expect = 7.0
 Identities = 11/31 (35%), Positives = 12/31 (38%)
 Frame = +1

Query: 829 PXGPXSAXXPXAXLPXXXXSHPPXXPPXTPP 921
           P  P     P A  P    + PP  PP  PP
Sbjct: 561 PLNPAQLRFP-AGFPNLPNAQPPPAPPPPPP 590


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 24.2 bits (50), Expect = 7.0
 Identities = 12/29 (41%), Positives = 13/29 (44%)
 Frame = -1

Query: 919 GGXXEGAPAGGXGTXXGG*QXGXAPRXGR 833
           GG   GAP GG G+  G    G     GR
Sbjct: 205 GGSGGGAPGGGGGSSGGPGPGGGGGGGGR 233


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 364,332
Number of Sequences: 2352
Number of extensions: 2387
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 563,979
effective HSP length: 65
effective length of database: 411,099
effective search space used: 124151898
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)