Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP02_F_P04
(1105 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB058759-1|BAB47485.1| 1134|Homo sapiens KIAA1856 protein protein. 34 1.1
L35013-1|AAA60300.1| 424|Homo sapiens spliceosomal protein prot... 33 2.5
BC090883-1|AAH90883.1| 424|Homo sapiens splicing factor 3b, sub... 33 2.5
BC013886-1|AAH13886.1| 424|Homo sapiens splicing factor 3b, sub... 33 2.5
BC004273-1|AAH04273.1| 424|Homo sapiens splicing factor 3b, sub... 33 2.5
AL591493-2|CAI12554.1| 424|Homo sapiens splicing factor 3b, sub... 33 2.5
AL590487-2|CAI12648.1| 424|Homo sapiens splicing factor 3b, sub... 33 2.5
AK223322-1|BAD97042.1| 424|Homo sapiens splicing factor 3b, sub... 33 2.5
X67337-1|CAA47752.1| 551|Homo sapiens Human pre-mRNA cleavage f... 31 7.5
X67336-1|CAA47751.1| 551|Homo sapiens HPBRII-7 protein. 31 7.5
BC000714-1|AAH00714.1| 588|Homo sapiens CPSF6 protein protein. 31 7.5
AK223568-1|BAD97288.1| 551|Homo sapiens cleavage and polyadenyl... 31 7.5
L21990-1|AAA60301.1| 464|Homo sapiens spiceosomal protein protein. 31 9.9
BC038446-1|AAH38446.1| 673|Homo sapiens SF1 protein protein. 31 9.9
BC015804-1|AAH15804.1| 481|Homo sapiens SF3A2 protein protein. 31 9.9
BC012925-1|AAH12925.1| 721|Homo sapiens MLXIPL protein protein. 31 9.9
BC009903-1|AAH09903.1| 464|Homo sapiens splicing factor 3a, sub... 31 9.9
BC005000-1|AAH05000.1| 478|Homo sapiens CPSF6 protein protein. 31 9.9
BC004434-1|AAH04434.1| 464|Homo sapiens splicing factor 3a, sub... 31 9.9
AF245474-1|AAK20939.1| 575|Homo sapiens Mlx interactor epsilon ... 31 9.9
AF245473-1|AAK20938.1| 831|Homo sapiens Mlx interactor delta pr... 31 9.9
AF245472-1|AAK20937.1| 850|Homo sapiens Mlx interactor gamma pr... 31 9.9
AF245471-1|AAK20936.1| 833|Homo sapiens Mlx interactor beta pro... 31 9.9
AF245470-1|AAK20935.1| 852|Homo sapiens Mlx interactor alpha pr... 31 9.9
AF156673-1|AAF68176.1| 852|Homo sapiens putative hepatic transc... 31 9.9
AF156603-1|AAF68174.1| 852|Homo sapiens putative hepatic transc... 31 9.9
AC005263-1|AAC25613.1| 464|Homo sapiens SP62_HUMAN protein. 31 9.9
>AB058759-1|BAB47485.1| 1134|Homo sapiens KIAA1856 protein protein.
Length = 1134
Score = 33.9 bits (74), Expect = 1.1
Identities = 15/41 (36%), Positives = 15/41 (36%)
Frame = +1
Query: 796 PXXPXLPXXPAPXGPXSAXXPXAXLPXXXXSHPPXXPPXTP 918
P P LP P P P P P HPP PP P
Sbjct: 962 PPHPPLPPPPLPPPPLPLRLPPLPPPPLPRPHPPPPPPLPP 1002
>L35013-1|AAA60300.1| 424|Homo sapiens spliceosomal protein
protein.
Length = 424
Score = 32.7 bits (71), Expect = 2.5
Identities = 16/39 (41%), Positives = 17/39 (43%)
Frame = +1
Query: 805 PXLPXXPAPXGPXSAXXPXAXLPXXXXSHPPXXPPXTPP 921
P +P A GP SA P A P SHP PP P
Sbjct: 264 PPMPPGAAGHGPPSAGTPGAGHPGHGHSHPHPFPPGGMP 302
>BC090883-1|AAH90883.1| 424|Homo sapiens splicing factor 3b,
subunit 4, 49kDa protein.
Length = 424
Score = 32.7 bits (71), Expect = 2.5
Identities = 16/39 (41%), Positives = 17/39 (43%)
Frame = +1
Query: 805 PXLPXXPAPXGPXSAXXPXAXLPXXXXSHPPXXPPXTPP 921
P +P A GP SA P A P SHP PP P
Sbjct: 264 PPMPPGAAGHGPPSAGTPGAGHPGHGHSHPHPFPPGGMP 302
>BC013886-1|AAH13886.1| 424|Homo sapiens splicing factor 3b,
subunit 4, 49kDa protein.
Length = 424
Score = 32.7 bits (71), Expect = 2.5
Identities = 16/39 (41%), Positives = 17/39 (43%)
Frame = +1
Query: 805 PXLPXXPAPXGPXSAXXPXAXLPXXXXSHPPXXPPXTPP 921
P +P A GP SA P A P SHP PP P
Sbjct: 264 PPMPPGAAGHGPPSAGTPGAGHPGHGHSHPHPFPPGGMP 302
>BC004273-1|AAH04273.1| 424|Homo sapiens splicing factor 3b,
subunit 4, 49kDa protein.
Length = 424
Score = 32.7 bits (71), Expect = 2.5
Identities = 16/39 (41%), Positives = 17/39 (43%)
Frame = +1
Query: 805 PXLPXXPAPXGPXSAXXPXAXLPXXXXSHPPXXPPXTPP 921
P +P A GP SA P A P SHP PP P
Sbjct: 264 PPMPPGAAGHGPPSAGTPGAGHPGHGHSHPHPFPPGGMP 302
>AL591493-2|CAI12554.1| 424|Homo sapiens splicing factor 3b,
subunit 4, 49kDa protein.
Length = 424
Score = 32.7 bits (71), Expect = 2.5
Identities = 16/39 (41%), Positives = 17/39 (43%)
Frame = +1
Query: 805 PXLPXXPAPXGPXSAXXPXAXLPXXXXSHPPXXPPXTPP 921
P +P A GP SA P A P SHP PP P
Sbjct: 264 PPMPPGAAGHGPPSAGTPGAGHPGHGHSHPHPFPPGGMP 302
>AL590487-2|CAI12648.1| 424|Homo sapiens splicing factor 3b,
subunit 4, 49kDa protein.
Length = 424
Score = 32.7 bits (71), Expect = 2.5
Identities = 16/39 (41%), Positives = 17/39 (43%)
Frame = +1
Query: 805 PXLPXXPAPXGPXSAXXPXAXLPXXXXSHPPXXPPXTPP 921
P +P A GP SA P A P SHP PP P
Sbjct: 264 PPMPPGAAGHGPPSAGTPGAGHPGHGHSHPHPFPPGGMP 302
>AK223322-1|BAD97042.1| 424|Homo sapiens splicing factor 3b,
subunit 4 variant protein.
Length = 424
Score = 32.7 bits (71), Expect = 2.5
Identities = 16/39 (41%), Positives = 17/39 (43%)
Frame = +1
Query: 805 PXLPXXPAPXGPXSAXXPXAXLPXXXXSHPPXXPPXTPP 921
P +P A GP SA P A P SHP PP P
Sbjct: 264 PPMPPGAAGHGPPSAGTPGAGHPGHGHSHPHPFPPGGMP 302
>X67337-1|CAA47752.1| 551|Homo sapiens Human pre-mRNA cleavage
factor I 68 kDa subunit protein.
Length = 551
Score = 31.1 bits (67), Expect = 7.5
Identities = 21/78 (26%), Positives = 23/78 (29%)
Frame = +1
Query: 688 PXXXXAXPXPLLXSXRPSXXXHATHPXXLXGXXXGXPXXPXLPXXPAPXGPXSAXXPXAX 867
P P PL + P+ P G G P LP P P P P
Sbjct: 253 PPPGQVLPPPL--AGPPNRGDRPPPPVLFPGQPFGQPPLGPLPPGPPPPVPGYGPPPGPP 310
Query: 868 LPXXXXSHPPXXPPXTPP 921
P PP P PP
Sbjct: 311 PPQQGPPPPPGPFPPRPP 328
Score = 30.7 bits (66), Expect = 9.9
Identities = 14/41 (34%), Positives = 14/41 (34%)
Frame = +1
Query: 796 PXXPXLPXXPAPXGPXSAXXPXAXLPXXXXSHPPXXPPXTP 918
P P P P P GP P LP PP P P
Sbjct: 319 PPGPFPPRPPGPLGPPLTLAPPPHLPGPPPGAPPPAPHVNP 359
>X67336-1|CAA47751.1| 551|Homo sapiens HPBRII-7 protein.
Length = 551
Score = 31.1 bits (67), Expect = 7.5
Identities = 21/78 (26%), Positives = 23/78 (29%)
Frame = +1
Query: 688 PXXXXAXPXPLLXSXRPSXXXHATHPXXLXGXXXGXPXXPXLPXXPAPXGPXSAXXPXAX 867
P P PL + P+ P G G P LP P P P P
Sbjct: 253 PPPGQVLPPPL--AGPPNRGDRPPPPVLFPGQPFGQPPLGPLPPGPPPPVPGYGPPPGPP 310
Query: 868 LPXXXXSHPPXXPPXTPP 921
P PP P PP
Sbjct: 311 PPQQGPPPPPGPFPPRPP 328
Score = 30.7 bits (66), Expect = 9.9
Identities = 14/41 (34%), Positives = 14/41 (34%)
Frame = +1
Query: 796 PXXPXLPXXPAPXGPXSAXXPXAXLPXXXXSHPPXXPPXTP 918
P P P P P GP P LP PP P P
Sbjct: 319 PPGPFPPRPPGPLGPPLTLAPPPHLPGPPPGAPPPAPHVNP 359
>BC000714-1|AAH00714.1| 588|Homo sapiens CPSF6 protein protein.
Length = 588
Score = 31.1 bits (67), Expect = 7.5
Identities = 21/78 (26%), Positives = 23/78 (29%)
Frame = +1
Query: 688 PXXXXAXPXPLLXSXRPSXXXHATHPXXLXGXXXGXPXXPXLPXXPAPXGPXSAXXPXAX 867
P P PL + P+ P G G P LP P P P P
Sbjct: 290 PPPGQVLPPPL--AGPPNRGDRPPPPVLFPGQPFGQPPLGPLPPGPPPPVPGYGPPPGPP 347
Query: 868 LPXXXXSHPPXXPPXTPP 921
P PP P PP
Sbjct: 348 PPQQGPPPPPGPFPPRPP 365
Score = 30.7 bits (66), Expect = 9.9
Identities = 14/41 (34%), Positives = 14/41 (34%)
Frame = +1
Query: 796 PXXPXLPXXPAPXGPXSAXXPXAXLPXXXXSHPPXXPPXTP 918
P P P P P GP P LP PP P P
Sbjct: 356 PPGPFPPRPPGPLGPPLTLAPPPHLPGPPPGAPPPAPHVNP 396
>AK223568-1|BAD97288.1| 551|Homo sapiens cleavage and
polyadenylation specific factor 6, 68 kD subunit variant
protein.
Length = 551
Score = 31.1 bits (67), Expect = 7.5
Identities = 21/78 (26%), Positives = 23/78 (29%)
Frame = +1
Query: 688 PXXXXAXPXPLLXSXRPSXXXHATHPXXLXGXXXGXPXXPXLPXXPAPXGPXSAXXPXAX 867
P P PL + P+ P G G P LP P P P P
Sbjct: 253 PPPGQVLPPPL--AGPPNRGDRPPPPVLFPGQPFGQPPLGPLPPGPPPPVPGYGPPPGPP 310
Query: 868 LPXXXXSHPPXXPPXTPP 921
P PP P PP
Sbjct: 311 PPQQGPPPPPGPFPPRPP 328
Score = 30.7 bits (66), Expect = 9.9
Identities = 14/41 (34%), Positives = 14/41 (34%)
Frame = +1
Query: 796 PXXPXLPXXPAPXGPXSAXXPXAXLPXXXXSHPPXXPPXTP 918
P P P P P GP P LP PP P P
Sbjct: 319 PPGPFPPRPPGPLGPPLTLAPPPHLPGPPPGAPPPAPHVNP 359
>L21990-1|AAA60301.1| 464|Homo sapiens spiceosomal protein protein.
Length = 464
Score = 30.7 bits (66), Expect = 9.9
Identities = 24/78 (30%), Positives = 26/78 (33%)
Frame = +1
Query: 688 PXXXXAXPXPLLXSXRPSXXXHATHPXXLXGXXXGXPXXPXLPXXPAPXGPXSAXXPXAX 867
P P PL+ P + P G G P P P PAP GP P
Sbjct: 227 PPGVKRPPPPLMNGLPPRPPLPESLPPPPPG---GLPLPPMPPTGPAPSGPPG---PPQL 280
Query: 868 LPXXXXSHPPXXPPXTPP 921
P HPP P PP
Sbjct: 281 PPPAPGVHPP-APVVHPP 297
>BC038446-1|AAH38446.1| 673|Homo sapiens SF1 protein protein.
Length = 673
Score = 30.7 bits (66), Expect = 9.9
Identities = 13/36 (36%), Positives = 14/36 (38%)
Frame = +1
Query: 814 PXXPAPXGPXSAXXPXAXLPXXXXSHPPXXPPXTPP 921
P P P P P P S+PP PP PP
Sbjct: 71 PPPPPPPPPPQQPPPPPPPPSPGASYPPPQPPPPPP 106
>BC015804-1|AAH15804.1| 481|Homo sapiens SF3A2 protein protein.
Length = 481
Score = 30.7 bits (66), Expect = 9.9
Identities = 24/78 (30%), Positives = 26/78 (33%)
Frame = +1
Query: 688 PXXXXAXPXPLLXSXRPSXXXHATHPXXLXGXXXGXPXXPXLPXXPAPXGPXSAXXPXAX 867
P P PL+ P + P G G P P P PAP GP P
Sbjct: 227 PPGVKRPPPPLMNGLPPRPPLPESLPPPPPG---GLPLPPMPPTGPAPSGPPG---PPQL 280
Query: 868 LPXXXXSHPPXXPPXTPP 921
P HPP P PP
Sbjct: 281 PPPAPGVHPP-APVVHPP 297
>BC012925-1|AAH12925.1| 721|Homo sapiens MLXIPL protein protein.
Length = 721
Score = 30.7 bits (66), Expect = 9.9
Identities = 15/39 (38%), Positives = 16/39 (41%)
Frame = +1
Query: 805 PXLPXXPAPXGPXSAXXPXAXLPXXXXSHPPXXPPXTPP 921
P LP P P P P A +P PP PP PP
Sbjct: 291 PRLPPPPVPP-PLLHYPPPAKVPGLEPCPPPPFPPMAPP 328
>BC009903-1|AAH09903.1| 464|Homo sapiens splicing factor 3a,
subunit 2, 66kDa protein.
Length = 464
Score = 30.7 bits (66), Expect = 9.9
Identities = 24/78 (30%), Positives = 26/78 (33%)
Frame = +1
Query: 688 PXXXXAXPXPLLXSXRPSXXXHATHPXXLXGXXXGXPXXPXLPXXPAPXGPXSAXXPXAX 867
P P PL+ P + P G G P P P PAP GP P
Sbjct: 227 PPGVKRPPPPLMNGLPPRPPLPESLPPPPPG---GLPLPPMPPTGPAPSGPPG---PPQL 280
Query: 868 LPXXXXSHPPXXPPXTPP 921
P HPP P PP
Sbjct: 281 PPPAPGVHPP-APVVHPP 297
>BC005000-1|AAH05000.1| 478|Homo sapiens CPSF6 protein protein.
Length = 478
Score = 30.7 bits (66), Expect = 9.9
Identities = 14/41 (34%), Positives = 14/41 (34%)
Frame = +1
Query: 796 PXXPXLPXXPAPXGPXSAXXPXAXLPXXXXSHPPXXPPXTP 918
P P P P P GP P LP PP P P
Sbjct: 246 PPGPFPPRPPGPLGPPLTLAPPPHLPGPPPGAPPPAPHVNP 286
>BC004434-1|AAH04434.1| 464|Homo sapiens splicing factor 3a,
subunit 2, 66kDa protein.
Length = 464
Score = 30.7 bits (66), Expect = 9.9
Identities = 24/78 (30%), Positives = 26/78 (33%)
Frame = +1
Query: 688 PXXXXAXPXPLLXSXRPSXXXHATHPXXLXGXXXGXPXXPXLPXXPAPXGPXSAXXPXAX 867
P P PL+ P + P G G P P P PAP GP P
Sbjct: 227 PPGVKRPPPPLMNGLPPRPPLPESLPPPPPG---GLPLPPMPPTGPAPSGPPG---PPQL 280
Query: 868 LPXXXXSHPPXXPPXTPP 921
P HPP P PP
Sbjct: 281 PPPAPGVHPP-APVVHPP 297
>AF245474-1|AAK20939.1| 575|Homo sapiens Mlx interactor epsilon
protein.
Length = 575
Score = 30.7 bits (66), Expect = 9.9
Identities = 15/39 (38%), Positives = 16/39 (41%)
Frame = +1
Query: 805 PXLPXXPAPXGPXSAXXPXAXLPXXXXSHPPXXPPXTPP 921
P LP P P P P A +P PP PP PP
Sbjct: 384 PRLPPPPVPP-PLLHYPPPAKVPGLEPCPPPPFPPMAPP 421
>AF245473-1|AAK20938.1| 831|Homo sapiens Mlx interactor delta
protein.
Length = 831
Score = 30.7 bits (66), Expect = 9.9
Identities = 15/39 (38%), Positives = 16/39 (41%)
Frame = +1
Query: 805 PXLPXXPAPXGPXSAXXPXAXLPXXXXSHPPXXPPXTPP 921
P LP P P P P A +P PP PP PP
Sbjct: 384 PRLPPPPVPP-PLLHYPPPAKVPGLEPCPPPPFPPMAPP 421
>AF245472-1|AAK20937.1| 850|Homo sapiens Mlx interactor gamma
protein.
Length = 850
Score = 30.7 bits (66), Expect = 9.9
Identities = 15/39 (38%), Positives = 16/39 (41%)
Frame = +1
Query: 805 PXLPXXPAPXGPXSAXXPXAXLPXXXXSHPPXXPPXTPP 921
P LP P P P P A +P PP PP PP
Sbjct: 384 PRLPPPPVPP-PLLHYPPPAKVPGLEPCPPPPFPPMAPP 421
>AF245471-1|AAK20936.1| 833|Homo sapiens Mlx interactor beta
protein.
Length = 833
Score = 30.7 bits (66), Expect = 9.9
Identities = 15/39 (38%), Positives = 16/39 (41%)
Frame = +1
Query: 805 PXLPXXPAPXGPXSAXXPXAXLPXXXXSHPPXXPPXTPP 921
P LP P P P P A +P PP PP PP
Sbjct: 384 PRLPPPPVPP-PLLHYPPPAKVPGLEPCPPPPFPPMAPP 421
>AF245470-1|AAK20935.1| 852|Homo sapiens Mlx interactor alpha
protein.
Length = 852
Score = 30.7 bits (66), Expect = 9.9
Identities = 15/39 (38%), Positives = 16/39 (41%)
Frame = +1
Query: 805 PXLPXXPAPXGPXSAXXPXAXLPXXXXSHPPXXPPXTPP 921
P LP P P P P A +P PP PP PP
Sbjct: 384 PRLPPPPVPP-PLLHYPPPAKVPGLEPCPPPPFPPMAPP 421
>AF156673-1|AAF68176.1| 852|Homo sapiens putative hepatic
transcription factor protein.
Length = 852
Score = 30.7 bits (66), Expect = 9.9
Identities = 15/39 (38%), Positives = 16/39 (41%)
Frame = +1
Query: 805 PXLPXXPAPXGPXSAXXPXAXLPXXXXSHPPXXPPXTPP 921
P LP P P P P A +P PP PP PP
Sbjct: 384 PRLPPPPVPP-PLLHYPPPAKVPGLEPCPPPPFPPMAPP 421
>AF156603-1|AAF68174.1| 852|Homo sapiens putative hepatic
transcription factor protein.
Length = 852
Score = 30.7 bits (66), Expect = 9.9
Identities = 15/39 (38%), Positives = 16/39 (41%)
Frame = +1
Query: 805 PXLPXXPAPXGPXSAXXPXAXLPXXXXSHPPXXPPXTPP 921
P LP P P P P A +P PP PP PP
Sbjct: 384 PRLPPPPVPP-PLLHYPPPAKVPGLEPCPPPPFPPMAPP 421
>AC005263-1|AAC25613.1| 464|Homo sapiens SP62_HUMAN protein.
Length = 464
Score = 30.7 bits (66), Expect = 9.9
Identities = 24/78 (30%), Positives = 26/78 (33%)
Frame = +1
Query: 688 PXXXXAXPXPLLXSXRPSXXXHATHPXXLXGXXXGXPXXPXLPXXPAPXGPXSAXXPXAX 867
P P PL+ P + P G G P P P PAP GP P
Sbjct: 227 PPGVKRPPPPLMNGLPPRPPLPESLPPPPPG---GLPLPPMPPTGPAPSGPPG---PPQL 280
Query: 868 LPXXXXSHPPXXPPXTPP 921
P HPP P PP
Sbjct: 281 PPPAPGVHPP-APVVHPP 297
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 58,027,190
Number of Sequences: 237096
Number of extensions: 568340
Number of successful extensions: 3848
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1787
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3613
length of database: 76,859,062
effective HSP length: 91
effective length of database: 55,283,326
effective search space used: 15258197976
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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