Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_P04
         (1105 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-3444|AAF51657.1|   98|Drosophila melanogaster CG11458-P...    29   8.6  
AE014296-1672|AAF50256.3| 2351|Drosophila melanogaster CG3654-PD...    29   8.6  

>AE014296-3444|AAF51657.1|   98|Drosophila melanogaster CG11458-PA
           protein.
          Length = 98

 Score = 29.5 bits (63), Expect = 8.6
 Identities = 14/42 (33%), Positives = 16/42 (38%)
 Frame = -3

Query: 920 GGVXGGXXGGWEXXXXGRXAXGXXAEXGPXGAGXXGRXGXXG 795
           GG  GG  GGW+    G    G        G G  G+ G  G
Sbjct: 23  GGGGGGGQGGWQKNGGGGGGGGQGGWQKGGGGGGGGKHGGGG 64


>AE014296-1672|AAF50256.3| 2351|Drosophila melanogaster CG3654-PD
            protein.
          Length = 2351

 Score = 29.5 bits (63), Expect = 8.6
 Identities = 18/50 (36%), Positives = 21/50 (42%), Gaps = 2/50 (4%)
 Frame = +3

Query: 627  PLPR--TXAXPXLSPXKTXPKXPXXXXXXPXPSTXXRPPLXXXPRHPPXS 770
            PLPR  T + P  SP K  P           PS+  + PL   P  PP S
Sbjct: 1017 PLPRSSTSSFPSPSPVKFQPTSGTTATTVGTPSSATKSPLAPPPPSPPVS 1066


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,961,492
Number of Sequences: 53049
Number of extensions: 152410
Number of successful extensions: 837
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 421
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 722
length of database: 24,988,368
effective HSP length: 86
effective length of database: 20,426,154
effective search space used: 5739749274
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)