Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_P03
         (898 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P40351 Cluster: Dolichyl pyrophosphate Glc1Man9GlcNAc2 ...    36   1.4  
UniRef50_Q6E795 Cluster: Sec-independent transporter protein; n=...    36   1.9  
UniRef50_O63545 Cluster: NADH dehydrogenase subunit 5; n=1; Bodo...    34   4.3  
UniRef50_A3QHG2 Cluster: Methyl-accepting chemotaxis sensory tra...    33   7.5  
UniRef50_A5DDB2 Cluster: Predicted protein; n=1; Pichia guillier...    33   9.9  

>UniRef50_P40351 Cluster: Dolichyl pyrophosphate Glc1Man9GlcNAc2
           alpha-1,3-glucosyltransferase; n=9;
           Saccharomycetales|Rep: Dolichyl pyrophosphate
           Glc1Man9GlcNAc2 alpha-1,3-glucosyltransferase -
           Saccharomyces cerevisiae (Baker's yeast)
          Length = 577

 Score = 35.9 bits (79), Expect = 1.4
 Identities = 25/79 (31%), Positives = 38/79 (48%)
 Frame = +2

Query: 350 LLGTLLILKES*TIFCLFLYFNQNDVEIDYIFMYMKP*LMFCYFLFIFILYVGIVTNFIC 529
           L+G+++  K    I C  LY     +   +IF+Y+ P    CYF+F+   YV  V NF  
Sbjct: 199 LIGSIVAAKNKRYILCAVLYTTA--ICFKHIFLYLAP----CYFVFLLRAYVLNVNNFKF 252

Query: 530 KPW*GNN*TYLFYLHLFKW 586
           K       +Y  +L L +W
Sbjct: 253 K-------SYKDFLFLIRW 264


>UniRef50_Q6E795 Cluster: Sec-independent transporter protein; n=1;
           Saprolegnia ferax|Rep: Sec-independent transporter
           protein - Saprolegnia ferax
          Length = 244

 Score = 35.5 bits (78), Expect = 1.9
 Identities = 20/45 (44%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
 Frame = +2

Query: 398 LFLYFNQNDVEIDYIF-MYMKP*LMFCYFLFIFILYVGIVTNFIC 529
           L+LYF   +   +YIF +Y++P L + YFLFIF  ++ I   FIC
Sbjct: 131 LWLYFYNINYLNNYIFNIYLEPKL-YDYFLFIFTFFIYIYIIFIC 174


>UniRef50_O63545 Cluster: NADH dehydrogenase subunit 5; n=1; Bodo
           saltans|Rep: NADH dehydrogenase subunit 5 - Bodo saltans
          Length = 212

 Score = 34.3 bits (75), Expect = 4.3
 Identities = 25/81 (30%), Positives = 36/81 (44%), Gaps = 1/81 (1%)
 Frame = +2

Query: 395 CLFLYFNQNDVEIDYIFMYMKP*LMFCYFLFIFILYVGIVTNFICKPW*GNN*TYLFYLH 574
           C FL F   D  + ++F+     LM+C F F F  +V +   F C         + FY  
Sbjct: 89  CFFLLFCCLDFFLYFVFLGFFYFLMYCLFFFSFFDFVFLCVVFCC------FFVFCFYGC 142

Query: 575 LFKWTFKVDINY-CMIFVIHC 634
           LF + F +D  Y C  F + C
Sbjct: 143 LFFYFFNLDCVYLCWRFFLCC 163


>UniRef50_A3QHG2 Cluster: Methyl-accepting chemotaxis sensory
           transducer precursor; n=1; Shewanella loihica PV-4|Rep:
           Methyl-accepting chemotaxis sensory transducer precursor
           - Shewanella loihica (strain BAA-1088 / PV-4)
          Length = 688

 Score = 33.5 bits (73), Expect = 7.5
 Identities = 16/33 (48%), Positives = 22/33 (66%)
 Frame = +1

Query: 151 RSLIAGSKSSIISNTAAFFGNSSTGRVEYVLSS 249
           R ++A +KS  I  T+ FF N STG+VE  LS+
Sbjct: 160 RDIVAAAKSKPIGFTSYFFSNPSTGQVEEKLSA 192


>UniRef50_A5DDB2 Cluster: Predicted protein; n=1; Pichia
           guilliermondii|Rep: Predicted protein - Pichia
           guilliermondii (Yeast) (Candida guilliermondii)
          Length = 537

 Score = 33.1 bits (72), Expect = 9.9
 Identities = 19/45 (42%), Positives = 22/45 (48%)
 Frame = -3

Query: 320 QQIYL*YFGMHIPPTIIDPSGQLPELRTYSTRPVELFPKNAAVFE 186
           QQIYL Y G H    IIDP   LP  +      VE   K + VF+
Sbjct: 463 QQIYLEYQGHHEKEWIIDPKFTLPSYKVQGDTIVECNTKYSEVFD 507


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 611,751,714
Number of Sequences: 1657284
Number of extensions: 10549690
Number of successful extensions: 21733
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 20802
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21667
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 81161904978
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)